Click here to switch to the map view.

The map label for this gene is yrfG [H]

Identifier: 77456511

GI number: 77456511

Start: 329843

End: 330505

Strand: Reverse

Name: yrfG [H]

Synonym: Pfl01_0283

Alternate gene names: 77456511

Gene position: 330505-329843 (Counterclockwise)

Preceding gene: 77456514

Following gene: 77456509

Centisome position: 5.13

GC content: 60.33

Gene sequence:

>663_bases
ATGCCTTCATTACCGTGGTCCGACATCGATACCGTTCTGCTGGACATGGACGGCACGTTGCTGGACCTGCACTTCGACAA
CCATTTCTGGCTGGAACATCTGCCGCAGCGCTACGCCGAACTGCATGGCGTGAGCCGGGCGATGGCGGAAATGGAATTGC
AGCCGCTGTTCGAGCGCCATGCCGGTCAGTTGCAGTGGTACTGCCTGGACTTCTGGAGCGCGGAGCTGAAGCTGTCGGTG
CGTGAGCTGAAACTGGAAACCGCCCACCTGATCGCCCTGCGCCCGGATGCCGACACCTTTCTGGACGCGATCAAACGAGC
CGGCAAACGCGTGGTGATGATCACCAATGCGCACCGCGATTCACTGTCGCTGAAACTGGAACGAATCGAACTGGCGCCGT
ACTTCGAACGGCTGATCAGCTCCCACGATTACGGCTTCCCCAAGGAGAATCCGCAGTTCTGGGATGCCTTGCAGGCCGAC
ATCGGTTTTGACCCGGCACGCAGCCTGTTCATCGACGACACCTTGCCGATCCTGCGCAGTGCGCGGAATTTCGGCGTGGC
GCATCTGCTGGCCGTGAAGGAGCCGGACAGCCGTAAAGGGCCGAAGGACACCGGGGAGTTTGCGGCGGTGGAGGATTATC
GGGATTTGATTACGGGCCTGTAG

Upstream 100 bases:

>100_bases
TTTCTGGCGCATGCAAAGCTCCTTGGCGTGAACGCGCTACTATAACGCGGCTTTTCCGATTGTTTGCGTCGGATATCTTT
CTACCGTTCGAGACGTTGCC

Downstream 100 bases:

>100_bases
ACCGCATCGTCCCCATCGCGAGCAGGCTCGCTCCCACAATGGAAATGCATTCCAATGTGGGAGCGAGCCTGCTCGCGGTA
GCGGTATCTGCGATTACTCG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPSLPWSDIDTVLLDMDGTLLDLHFDNHFWLEHLPQRYAELHGVSRAMAEMELQPLFERHAGQLQWYCLDFWSAELKLSV
RELKLETAHLIALRPDADTFLDAIKRAGKRVVMITNAHRDSLSLKLERIELAPYFERLISSHDYGFPKENPQFWDALQAD
IGFDPARSLFIDDTLPILRSARNFGVAHLLAVKEPDSRKGPKDTGEFAAVEDYRDLITGL

Sequences:

>Translated_220_residues
MPSLPWSDIDTVLLDMDGTLLDLHFDNHFWLEHLPQRYAELHGVSRAMAEMELQPLFERHAGQLQWYCLDFWSAELKLSV
RELKLETAHLIALRPDADTFLDAIKRAGKRVVMITNAHRDSLSLKLERIELAPYFERLISSHDYGFPKENPQFWDALQAD
IGFDPARSLFIDDTLPILRSARNFGVAHLLAVKEPDSRKGPKDTGEFAAVEDYRDLITGL
>Mature_219_residues
PSLPWSDIDTVLLDMDGTLLDLHFDNHFWLEHLPQRYAELHGVSRAMAEMELQPLFERHAGQLQWYCLDFWSAELKLSVR
ELKLETAHLIALRPDADTFLDAIKRAGKRVVMITNAHRDSLSLKLERIELAPYFERLISSHDYGFPKENPQFWDALQADI
GFDPARSLFIDDTLPILRSARNFGVAHLLAVKEPDSRKGPKDTGEFAAVEDYRDLITGL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=218, Percent_Identity=39.9082568807339, Blast_Score=174, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25270; Mature: 25139

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLPWSDIDTVLLDMDGTLLDLHFDNHFWLEHLPQRYAELHGVSRAMAEMELQPLFERH
CCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGQLQWYCLDFWSAELKLSVRELKLETAHLIALRPDADTFLDAIKRAGKRVVMITNAHRD
CCCEEEEEEEECCHHHEEHHHHHEEEEEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCC
SLSLKLERIELAPYFERLISSHDYGFPKENPQFWDALQADIGFDPARSLFIDDTLPILRS
CCEEEEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHEEECCCHHHHHH
ARNFGVAHLLAVKEPDSRKGPKDTGEFAAVEDYRDLITGL
HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PSLPWSDIDTVLLDMDGTLLDLHFDNHFWLEHLPQRYAELHGVSRAMAEMELQPLFERH
CCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGQLQWYCLDFWSAELKLSVRELKLETAHLIALRPDADTFLDAIKRAGKRVVMITNAHRD
CCCEEEEEEEECCHHHEEHHHHHEEEEEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCC
SLSLKLERIELAPYFERLISSHDYGFPKENPQFWDALQADIGFDPARSLFIDDTLPILRS
CCEEEEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHEEECCCHHHHHH
ARNFGVAHLLAVKEPDSRKGPKDTGEFAAVEDYRDLITGL
HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]