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The map label for this gene is fdhD [H]

Identifier: 77456508

GI number: 77456508

Start: 327352

End: 328191

Strand: Reverse

Name: fdhD [H]

Synonym: Pfl01_0280

Alternate gene names: 77456508

Gene position: 328191-327352 (Counterclockwise)

Preceding gene: 77456509

Following gene: 77456507

Centisome position: 5.1

GC content: 63.69

Gene sequence:

>840_bases
ATGAACGCCAAGCGCCCGGCCTGCGCGGCGCCCGCTCTCGAAACACCCGCGCCTGCCGCCAGTCAGACCTACAGCTACAG
CGATCTACCCCTCGCGGAATCGGCCAGCACCGCGCTGGCCGAAGAAGTCGCGTTGGCGATTGCCTACAACGGCATCAGCC
AGGCCGTCATGCTGGTGACGCCGACCGACCTTGAAGACTTCATCGTCGGTTTCAGCCTCGGCAGCGGCATCATCGAAGAC
GCCTCGGACATTTACGATCTGCAACTGAGCGGTTCGGGCTCGGCGCAATACGCGCAAGTGACCATCGCCAACCGCGCGTT
CTGGAACCTCAAGCAACAGCGTCGGCAACTGGCCGGCACCAGCGGCTGCGGGTTGTGCGGCGTCGAAGCAGTGGAGCAGG
CGTTGCCTGATCTCAAGGTCTTGCCCGGCGCCCCCTTGCCGCCCATCGAATGGCTCGACGGTTTGCGTCAGCGCATCGGT
GCTTTTCAGCCACTGGGTCAGCACTGCGGCGCGGTGCACGCGGCAGTGTTCATGAACGCCAGCGGTGAATTGCTGCTGGG
CCGCGAAGACATCGGCCGGCACAACGCCCTCGACAAACTGATCGGCGGCCTGATCCGGCAAAAGATATCGACAGCCGGTG
GCCTGGCGATTGTCACCAGCCGTTGCAGCCTCGAATTGATCCAGAAAGTTTTGCGGGCCGGGATTCAGACCCTGGTCAGC
CTGTCCGCGCCCACCGGCCTTGCCGTGCAATGGGCCCGGCGCCACAACCTCAATCTCATCCACCTGCCGCAGAAAAACGC
GCCGCGGGTGTATAGCCCAGAAATGGAGAAACACCCGTGA

Upstream 100 bases:

>100_bases
ACGCTTGATCGACGGCATCTATCGAGGGATCGACACTAGCGATTAGACGCGACATCTTGCCGCGCCTAGTCTTAACGTTG
ATCAATCCATCGGTGATGCC

Downstream 100 bases:

>100_bases
GCCAACATCATCAAGCCGACCAGAAACCCGTCCCGCGTTACAAGCCTTACAAGGGCCCGGCCGGCGGCTGGGGTGCCCTG
ATCAGCGTGGCCCAGGCCTG

Product: formate dehydrogenase subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNAKRPACAAPALETPAPAASQTYSYSDLPLAESASTALAEEVALAIAYNGISQAVMLVTPTDLEDFIVGFSLGSGIIED
ASDIYDLQLSGSGSAQYAQVTIANRAFWNLKQQRRQLAGTSGCGLCGVEAVEQALPDLKVLPGAPLPPIEWLDGLRQRIG
AFQPLGQHCGAVHAAVFMNASGELLLGREDIGRHNALDKLIGGLIRQKISTAGGLAIVTSRCSLELIQKVLRAGIQTLVS
LSAPTGLAVQWARRHNLNLIHLPQKNAPRVYSPEMEKHP

Sequences:

>Translated_279_residues
MNAKRPACAAPALETPAPAASQTYSYSDLPLAESASTALAEEVALAIAYNGISQAVMLVTPTDLEDFIVGFSLGSGIIED
ASDIYDLQLSGSGSAQYAQVTIANRAFWNLKQQRRQLAGTSGCGLCGVEAVEQALPDLKVLPGAPLPPIEWLDGLRQRIG
AFQPLGQHCGAVHAAVFMNASGELLLGREDIGRHNALDKLIGGLIRQKISTAGGLAIVTSRCSLELIQKVLRAGIQTLVS
LSAPTGLAVQWARRHNLNLIHLPQKNAPRVYSPEMEKHP
>Mature_279_residues
MNAKRPACAAPALETPAPAASQTYSYSDLPLAESASTALAEEVALAIAYNGISQAVMLVTPTDLEDFIVGFSLGSGIIED
ASDIYDLQLSGSGSAQYAQVTIANRAFWNLKQQRRQLAGTSGCGLCGVEAVEQALPDLKVLPGAPLPPIEWLDGLRQRIG
AFQPLGQHCGAVHAAVFMNASGELLLGREDIGRHNALDKLIGGLIRQKISTAGGLAIVTSRCSLELIQKVLRAGIQTLVS
LSAPTGLAVQWARRHNLNLIHLPQKNAPRVYSPEMEKHP

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=234, Percent_Identity=42.3076923076923, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29590; Mature: 29590

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKRPACAAPALETPAPAASQTYSYSDLPLAESASTALAEEVALAIAYNGISQAVMLVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEE
PTDLEDFIVGFSLGSGIIEDASDIYDLQLSGSGSAQYAQVTIANRAFWNLKQQRRQLAGT
CCCHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHCCC
SGCGLCGVEAVEQALPDLKVLPGAPLPPIEWLDGLRQRIGAFQPLGQHCGAVHAAVFMNA
CCCCCCCHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECC
SGELLLGREDIGRHNALDKLIGGLIRQKISTAGGLAIVTSRCSLELIQKVLRAGIQTLVS
CCCEEECHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LSAPTGLAVQWARRHNLNLIHLPQKNAPRVYSPEMEKHP
HCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAKRPACAAPALETPAPAASQTYSYSDLPLAESASTALAEEVALAIAYNGISQAVMLVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEE
PTDLEDFIVGFSLGSGIIEDASDIYDLQLSGSGSAQYAQVTIANRAFWNLKQQRRQLAGT
CCCHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHCCC
SGCGLCGVEAVEQALPDLKVLPGAPLPPIEWLDGLRQRIGAFQPLGQHCGAVHAAVFMNA
CCCCCCCHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECC
SGELLLGREDIGRHNALDKLIGGLIRQKISTAGGLAIVTSRCSLELIQKVLRAGIQTLVS
CCCEEECHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LSAPTGLAVQWARRHNLNLIHLPQKNAPRVYSPEMEKHP
HCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]