Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456396

Identifier: 77456396

GI number: 77456396

Start: 204093

End: 204554

Strand: Direct

Name: 77456396

Synonym: Pfl01_0168

Alternate gene names: NA

Gene position: 204093-204554 (Clockwise)

Preceding gene: 77456392

Following gene: 77456397

Centisome position: 3.17

GC content: 61.9

Gene sequence:

>462_bases
ATGCGTATGGCCAAGAAAGTGCAGAGCAGCCTCAACCGGGCGCAATGCGAATATGACATCGTCACCCACCCGCACTCGTC
CAGCAGCCTGGAAACGGCGCGGGTCTCCGGGATTGCCGCAGAGCGGGTGGCCAAATCGGTGATCCTGGACGACCGTCACG
GGCACTACCTGATGGCGGTGCTGCCCGCCAGCCGCCACCTGGACTTGAGCAAGGTGCGCAGCAGCGGCGAATGGCAGATC
ACCCGCGAAAGCAATCTGGCGCACATTTTCGACGACTGCGAACGCGGTGCCGTACCGCCACTGGGCGACTCCTACGGCCT
GGACATGGTCATCGACCCGCTGCTGACCCGGCAGAAAGACATCTACCTGGAAGCCGGCAACCATAACAACCTGCTGCACA
TGAGCATGCCCGAATTCCTGAAAATGGTGCCGCATGCGCAGGTGCGGGAGTTGAGTCAGTAG

Upstream 100 bases:

>100_bases
ATTTCCCGGTGCTCGTGGCTTGCCGGACTAGACTTTGAAGGACAGCCACAGCGTTTCATTACCGTCCGCCGCGCAGCGTC
GGCGGGCACCGAGGTGCATC

Downstream 100 bases:

>100_bases
CTTTTTTAGCGTCTGTGCCGACGCCAATCGCGAGCAAGCCCGCTCCCACAGGTTCTGCGCTAAACCTGTGGGAGCGGGCT
TGCTCGCGAAAAATCTTTCA

Product: YbaK/prolyl-tRNA synthetase associated protein

Products: NA

Alternate protein names: YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; YbaK / Prolyl-TRNA Synthetases Associated Domain Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAVLPASRHLDLSKVRSSGEWQI
TRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKDIYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ

Sequences:

>Translated_153_residues
MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAVLPASRHLDLSKVRSSGEWQI
TRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKDIYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ
>Mature_153_residues
MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAVLPASRHLDLSKVRSSGEWQI
TRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKDIYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17186; Mature: 17186

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAV
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LPASRHLDLSKVRSSGEWQITRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKD
ECCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCE
IYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ
EEEEECCCCCEEEECHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAV
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LPASRHLDLSKVRSSGEWQITRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKD
ECCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCE
IYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ
EEEEECCCCCEEEECHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA