| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456396
Identifier: 77456396
GI number: 77456396
Start: 204093
End: 204554
Strand: Direct
Name: 77456396
Synonym: Pfl01_0168
Alternate gene names: NA
Gene position: 204093-204554 (Clockwise)
Preceding gene: 77456392
Following gene: 77456397
Centisome position: 3.17
GC content: 61.9
Gene sequence:
>462_bases ATGCGTATGGCCAAGAAAGTGCAGAGCAGCCTCAACCGGGCGCAATGCGAATATGACATCGTCACCCACCCGCACTCGTC CAGCAGCCTGGAAACGGCGCGGGTCTCCGGGATTGCCGCAGAGCGGGTGGCCAAATCGGTGATCCTGGACGACCGTCACG GGCACTACCTGATGGCGGTGCTGCCCGCCAGCCGCCACCTGGACTTGAGCAAGGTGCGCAGCAGCGGCGAATGGCAGATC ACCCGCGAAAGCAATCTGGCGCACATTTTCGACGACTGCGAACGCGGTGCCGTACCGCCACTGGGCGACTCCTACGGCCT GGACATGGTCATCGACCCGCTGCTGACCCGGCAGAAAGACATCTACCTGGAAGCCGGCAACCATAACAACCTGCTGCACA TGAGCATGCCCGAATTCCTGAAAATGGTGCCGCATGCGCAGGTGCGGGAGTTGAGTCAGTAG
Upstream 100 bases:
>100_bases ATTTCCCGGTGCTCGTGGCTTGCCGGACTAGACTTTGAAGGACAGCCACAGCGTTTCATTACCGTCCGCCGCGCAGCGTC GGCGGGCACCGAGGTGCATC
Downstream 100 bases:
>100_bases CTTTTTTAGCGTCTGTGCCGACGCCAATCGCGAGCAAGCCCGCTCCCACAGGTTCTGCGCTAAACCTGTGGGAGCGGGCT TGCTCGCGAAAAATCTTTCA
Product: YbaK/prolyl-tRNA synthetase associated protein
Products: NA
Alternate protein names: YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; YbaK / Prolyl-TRNA Synthetases Associated Domain Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAVLPASRHLDLSKVRSSGEWQI TRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKDIYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ
Sequences:
>Translated_153_residues MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAVLPASRHLDLSKVRSSGEWQI TRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKDIYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ >Mature_153_residues MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAVLPASRHLDLSKVRSSGEWQI TRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKDIYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17186; Mature: 17186
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAV CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LPASRHLDLSKVRSSGEWQITRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKD ECCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCE IYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ EEEEECCCCCEEEECHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MRMAKKVQSSLNRAQCEYDIVTHPHSSSSLETARVSGIAAERVAKSVILDDRHGHYLMAV CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LPASRHLDLSKVRSSGEWQITRESNLAHIFDDCERGAVPPLGDSYGLDMVIDPLLTRQKD ECCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCE IYLEAGNHNNLLHMSMPEFLKMVPHAQVRELSQ EEEEECCCCCEEEECHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA