| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456384
Identifier: 77456384
GI number: 77456384
Start: 187891
End: 189486
Strand: Direct
Name: 77456384
Synonym: Pfl01_0156
Alternate gene names: NA
Gene position: 187891-189486 (Clockwise)
Preceding gene: 77456376
Following gene: 77456385
Centisome position: 2.92
GC content: 63.47
Gene sequence:
>1596_bases ATGGAGGTCCTTCGCGAGACGCCGCTGGGGGATACCCAGGACCCGTTCGCTGCACCGAATGCCGGTGTCCGGCGCCTGTT GCGCTGGGCGCGCGAGCACTGGTTGATACCGATCCTGCTGCTGGCCACGGCGGTGCGCTTTTATGATCTGACCGCTGCCG CGATCTGGGGCGATGAAGGTTCGAGCCTGCTGCTGGCGCGCTATTCGCCGGGCGTGATCTGGACGCATGCCGCGTTCGAT GTGCATCCGCCGCTGTACTTCATGTTGCTGCACGGCTGGATCGGGATGTTCGGCGACGGCCTCCTGGCCATTCGCAGTTT CAGTGCGCTGGCCGGCATCGCCACGGTCGGACTCGGCGTGAGCCTGGTCGACCGCCTGGCCACTCGCCGCGCGGCGATCA TCGCGGGGGTGTTGCTGGCGCTGCTGCCGACGGCGGTGCGCTACAGCCAGGAAGTGCGCATGTACGCGTTGCTTGGCTTG CTGCTGATCGGTGCGACGCTGGTGCTGGTCAAGTGGATCCGGCGACCGCAGCGTCACCGCTATCTGCTGATCTATGCGCT GCTGATGACGGCGGCGTTGTACACCCACTATTTCGCCGTGCTGGCGGCGCTGAGCCATTGGCTGTATCTGGGGTTGATTC GCCTGTTGCCGGGTTATCGCCTGAAGCATCTCCAGCGCAAGGATTGGTGGCTGGCCAATCTCGCCATCGTCGTGCTCTAC CTGCCGTGGCTACCGAACCTGATCGACCTGCTGCAACACATGGACGCGCTCAAGGCCGGCGGCGATGTGGGCTGGGAAGA TCCGGTGACCCTGTCTTCGCTGCCATCGATGATCTGGCTCTGGTTGATTCAGGACGAGGGCGAACATCTCCCGTTGCTGC TGTTCGGCGGTGTGCCCCTGGCTTTGCTGGTGCTGGCGGGGGTCGCCGTTGCCCGTGATCGCAGCGTGAACCATGGCAGC GTGCTGCTGGCGGTCTACACCGGCATGCCGTTGTTGCTGGTGTTCGCCGTGTCTTTCATTACGCCGGTGTTCATCGAGCG TTACCTGACTGCCTACGCGCTGGGGTTGCCGATGCTGGCGGCGCTGGCCATCGACCGTCTCTACAGCAGCGTGCGCGTGC TGGCGATGGCGGTGCTGCTGTCGCTGGTCGGGGTCGAGATGATCGGGGTGAACAACAACGCCACGGTCGACCGCAACGAC CAGTTCAACGTCATGGTCGATTACGTCAACCGCCACTTCGCCAGCGGCGACCGCATCGTCACCAGCGACATGCTCTGGTA CCTCAGTTACGTCTATTACAACCGCACTGAGGCTCAAGTCCGGCTGTTTACGCCGCCCACTGCCGAGGGACGCTCGACTC GCCCGAACCATTACGGTTTCGGCACGCTGGTGTCCGATGAGGTTTACCTTGATCGGTTGGGCGACCTGCCGAAGGACAGT GCCCGGGTCTGGTTGATCGGTGATCTGGACGTGGAAGTACCCGATCCATTTCTGCCCTTGCCAGCGGCCTGGCACCTGCG GGATCAGGTGCAGGCGGGTGGTGCGAAAGCGCGACTTTTTTCGTTGCAGACGCCCAATGGAGCGGGAGAAAACTGA
Upstream 100 bases:
>100_bases CCGGACGTCGTCACGGCCGCGCATCGACTTCGGCGCTGGCCTACAGTGTTCGCAGTCAATGACGCAAATCGAGTTCGCAA AAAACGCTGAGGGGAGGTTG
Downstream 100 bases:
>100_bases CTTAAACGCTTCACCATTTTATTCGCGATAAATACGAAGTTTTTAAGTCCGTTTTGCTCTTTTCTGATATCAAAACACTA CTAGTCGAATGGGTATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MEVLRETPLGDTQDPFAAPNAGVRRLLRWAREHWLIPILLLATAVRFYDLTAAAIWGDEGSSLLLARYSPGVIWTHAAFD VHPPLYFMLLHGWIGMFGDGLLAIRSFSALAGIATVGLGVSLVDRLATRRAAIIAGVLLALLPTAVRYSQEVRMYALLGL LLIGATLVLVKWIRRPQRHRYLLIYALLMTAALYTHYFAVLAALSHWLYLGLIRLLPGYRLKHLQRKDWWLANLAIVVLY LPWLPNLIDLLQHMDALKAGGDVGWEDPVTLSSLPSMIWLWLIQDEGEHLPLLLFGGVPLALLVLAGVAVARDRSVNHGS VLLAVYTGMPLLLVFAVSFITPVFIERYLTAYALGLPMLAALAIDRLYSSVRVLAMAVLLSLVGVEMIGVNNNATVDRND QFNVMVDYVNRHFASGDRIVTSDMLWYLSYVYYNRTEAQVRLFTPPTAEGRSTRPNHYGFGTLVSDEVYLDRLGDLPKDS ARVWLIGDLDVEVPDPFLPLPAAWHLRDQVQAGGAKARLFSLQTPNGAGEN
Sequences:
>Translated_531_residues MEVLRETPLGDTQDPFAAPNAGVRRLLRWAREHWLIPILLLATAVRFYDLTAAAIWGDEGSSLLLARYSPGVIWTHAAFD VHPPLYFMLLHGWIGMFGDGLLAIRSFSALAGIATVGLGVSLVDRLATRRAAIIAGVLLALLPTAVRYSQEVRMYALLGL LLIGATLVLVKWIRRPQRHRYLLIYALLMTAALYTHYFAVLAALSHWLYLGLIRLLPGYRLKHLQRKDWWLANLAIVVLY LPWLPNLIDLLQHMDALKAGGDVGWEDPVTLSSLPSMIWLWLIQDEGEHLPLLLFGGVPLALLVLAGVAVARDRSVNHGS VLLAVYTGMPLLLVFAVSFITPVFIERYLTAYALGLPMLAALAIDRLYSSVRVLAMAVLLSLVGVEMIGVNNNATVDRND QFNVMVDYVNRHFASGDRIVTSDMLWYLSYVYYNRTEAQVRLFTPPTAEGRSTRPNHYGFGTLVSDEVYLDRLGDLPKDS ARVWLIGDLDVEVPDPFLPLPAAWHLRDQVQAGGAKARLFSLQTPNGAGEN >Mature_531_residues MEVLRETPLGDTQDPFAAPNAGVRRLLRWAREHWLIPILLLATAVRFYDLTAAAIWGDEGSSLLLARYSPGVIWTHAAFD VHPPLYFMLLHGWIGMFGDGLLAIRSFSALAGIATVGLGVSLVDRLATRRAAIIAGVLLALLPTAVRYSQEVRMYALLGL LLIGATLVLVKWIRRPQRHRYLLIYALLMTAALYTHYFAVLAALSHWLYLGLIRLLPGYRLKHLQRKDWWLANLAIVVLY LPWLPNLIDLLQHMDALKAGGDVGWEDPVTLSSLPSMIWLWLIQDEGEHLPLLLFGGVPLALLVLAGVAVARDRSVNHGS VLLAVYTGMPLLLVFAVSFITPVFIERYLTAYALGLPMLAALAIDRLYSSVRVLAMAVLLSLVGVEMIGVNNNATVDRND QFNVMVDYVNRHFASGDRIVTSDMLWYLSYVYYNRTEAQVRLFTPPTAEGRSTRPNHYGFGTLVSDEVYLDRLGDLPKDS ARVWLIGDLDVEVPDPFLPLPAAWHLRDQVQAGGAKARLFSLQTPNGAGEN
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59044; Mature: 59044
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVLRETPLGDTQDPFAAPNAGVRRLLRWAREHWLIPILLLATAVRFYDLTAAAIWGDEG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC SSLLLARYSPGVIWTHAAFDVHPPLYFMLLHGWIGMFGDGLLAIRSFSALAGIATVGLGV CEEEEEECCCCEEEEECEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SLVDRLATRRAAIIAGVLLALLPTAVRYSQEVRMYALLGLLLIGATLVLVKWIRRPQRHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCH YLLIYALLMTAALYTHYFAVLAALSHWLYLGLIRLLPGYRLKHLQRKDWWLANLAIVVLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH LPWLPNLIDLLQHMDALKAGGDVGWEDPVTLSSLPSMIWLWLIQDEGEHLPLLLFGGVPL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCEEEECCHHH ALLVLAGVAVARDRSVNHGSVLLAVYTGMPLLLVFAVSFITPVFIERYLTAYALGLPMLA HHHHHHHHHHHHCCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAIDRLYSSVRVLAMAVLLSLVGVEMIGVNNNATVDRNDQFNVMVDYVNRHFASGDRIV HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE TSDMLWYLSYVYYNRTEAQVRLFTPPTAEGRSTRPNHYGFGTLVSDEVYLDRLGDLPKDS HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCC ARVWLIGDLDVEVPDPFLPLPAAWHLRDQVQAGGAKARLFSLQTPNGAGEN CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MEVLRETPLGDTQDPFAAPNAGVRRLLRWAREHWLIPILLLATAVRFYDLTAAAIWGDEG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC SSLLLARYSPGVIWTHAAFDVHPPLYFMLLHGWIGMFGDGLLAIRSFSALAGIATVGLGV CEEEEEECCCCEEEEECEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SLVDRLATRRAAIIAGVLLALLPTAVRYSQEVRMYALLGLLLIGATLVLVKWIRRPQRHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCH YLLIYALLMTAALYTHYFAVLAALSHWLYLGLIRLLPGYRLKHLQRKDWWLANLAIVVLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH LPWLPNLIDLLQHMDALKAGGDVGWEDPVTLSSLPSMIWLWLIQDEGEHLPLLLFGGVPL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCEEEECCHHH ALLVLAGVAVARDRSVNHGSVLLAVYTGMPLLLVFAVSFITPVFIERYLTAYALGLPMLA HHHHHHHHHHHHCCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAIDRLYSSVRVLAMAVLLSLVGVEMIGVNNNATVDRNDQFNVMVDYVNRHFASGDRIV HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE TSDMLWYLSYVYYNRTEAQVRLFTPPTAEGRSTRPNHYGFGTLVSDEVYLDRLGDLPKDS HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCC ARVWLIGDLDVEVPDPFLPLPAAWHLRDQVQAGGAKARLFSLQTPNGAGEN CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA