| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yegM [C]
Identifier: 77456373
GI number: 77456373
Start: 175117
End: 175896
Strand: Direct
Name: yegM [C]
Synonym: Pfl01_0145
Alternate gene names: 77456373
Gene position: 175117-175896 (Clockwise)
Preceding gene: 77456372
Following gene: 77456374
Centisome position: 2.72
GC content: 63.85
Gene sequence:
>780_bases ATGCGGCGTTTTCGTGGTTGGGTTGTCGGATTGACCTTTGTAACGTGTGCAGTTCAGGCTCAAACGCCCGCGCCAGACGA TCCGCTGCTGGATAACGGCGGGGCGGCGAATGCGTCGGCCAGCAGTGAAGCGCGCGGGGTGTTGCGGGCGCGGGATCAGG CGACGCTGGCCAGCGAGTTGTCCGGGCGAATCGTCGAGTTGCCGTTCAGCGAGGGCGAGTCGTTCAAGAAGGGCGATACC CTGGCGCGGTTCGACTGTTCGGCCTATCAGGCCCAGTTGAATGCCGCGCAGGCCGCCAGCCGTGGCGCCGGTGAAGAGCT GGCGCACAACCGGCAATTGGCGGCGCTCAATTCCGTCGGGCGTTTCGAAGTGGCCCGGGCCGAGGCCAAGGTCAGCGAAA CCCAGGCGCAATCTCAGGTTTATCAAGTCCAGGTCAAACGTTGCAGCGTGGTCGCGCCGTTCGATGGGCAAGTGGTGGAA CGCAAGGTGCAGCGTTATGAAAGCGTGCCGGCCGGTGCGCCGCTGCTCGATGTGGTCGACAACCGCACCCTGGAAATCCA TCTGTTGGTGCCGTCGCGCTGGATGGCCAGGCTCAAGCCCGGTCAGTCGTTCAGCTTCGTGCCCGATGAAACCGGACAGC CGATCGACGCCACGGTCAAGCGCCTCGGTGCGCGAATCGATGAAGGCAGCCAGACCCTGTTGCTGGTCGCCACACTCCCC GAAGCCAAAGGCTTGCTCGCCGGCATGAGCGGCACCGCGCATTTTCCGGAGTTTAAGTGA
Upstream 100 bases:
>100_bases AGATGGCGCAGCGTTGATTCTCCCACCCGAATGATGGCCTTTCGCTTGACGCTAATCGCCGCTGTCGTAGACTCCGAGCA TCCGTCAGGGAGTAACGGTT
Downstream 100 bases:
>100_bases ACGCCCCGGTGAGCGGCGCCGCCGAGCAGGTGTTCGCGCGGTTTCTCGATCTCGAACGGCAGACCCGCGCCGCTCATGAT ATTTCGCAACTGGCCTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRRFRGWVVGLTFVTCAVQAQTPAPDDPLLDNGGAANASASSEARGVLRARDQATLASELSGRIVELPFSEGESFKKGDT LARFDCSAYQAQLNAAQAASRGAGEELAHNRQLAALNSVGRFEVARAEAKVSETQAQSQVYQVQVKRCSVVAPFDGQVVE RKVQRYESVPAGAPLLDVVDNRTLEIHLLVPSRWMARLKPGQSFSFVPDETGQPIDATVKRLGARIDEGSQTLLLVATLP EAKGLLAGMSGTAHFPEFK
Sequences:
>Translated_259_residues MRRFRGWVVGLTFVTCAVQAQTPAPDDPLLDNGGAANASASSEARGVLRARDQATLASELSGRIVELPFSEGESFKKGDT LARFDCSAYQAQLNAAQAASRGAGEELAHNRQLAALNSVGRFEVARAEAKVSETQAQSQVYQVQVKRCSVVAPFDGQVVE RKVQRYESVPAGAPLLDVVDNRTLEIHLLVPSRWMARLKPGQSFSFVPDETGQPIDATVKRLGARIDEGSQTLLLVATLP EAKGLLAGMSGTAHFPEFK >Mature_259_residues MRRFRGWVVGLTFVTCAVQAQTPAPDDPLLDNGGAANASASSEARGVLRARDQATLASELSGRIVELPFSEGESFKKGDT LARFDCSAYQAQLNAAQAASRGAGEELAHNRQLAALNSVGRFEVARAEAKVSETQAQSQVYQVQVKRCSVVAPFDGQVVE RKVQRYESVPAGAPLLDVVDNRTLEIHLLVPSRWMARLKPGQSFSFVPDETGQPIDATVKRLGARIDEGSQTLLLVATLP EAKGLLAGMSGTAHFPEFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082036, Length=158, Percent_Identity=31.6455696202532, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27821; Mature: 27821
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFRGWVVGLTFVTCAVQAQTPAPDDPLLDNGGAANASASSEARGVLRARDQATLASEL CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SGRIVELPFSEGESFKKGDTLARFDCSAYQAQLNAAQAASRGAGEELAHNRQLAALNSVG CCCEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCC RFEVARAEAKVSETQAQSQVYQVQVKRCSVVAPFDGQVVERKVQRYESVPAGAPLLDVVD CHHHHHHHHHHHHHHHHHHHHHEEHHHHEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHC NRTLEIHLLVPSRWMARLKPGQSFSFVPDETGQPIDATVKRLGARIDEGSQTLLLVATLP CCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECC EAKGLLAGMSGTAHFPEFK CCCHHEECCCCCCCCCCCC >Mature Secondary Structure MRRFRGWVVGLTFVTCAVQAQTPAPDDPLLDNGGAANASASSEARGVLRARDQATLASEL CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SGRIVELPFSEGESFKKGDTLARFDCSAYQAQLNAAQAASRGAGEELAHNRQLAALNSVG CCCEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCC RFEVARAEAKVSETQAQSQVYQVQVKRCSVVAPFDGQVVERKVQRYESVPAGAPLLDVVD CHHHHHHHHHHHHHHHHHHHHHEEHHHHEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHC NRTLEIHLLVPSRWMARLKPGQSFSFVPDETGQPIDATVKRLGARIDEGSQTLLLVATLP CCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECC EAKGLLAGMSGTAHFPEFK CCCHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA