| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aprE [H]
Identifier: 77456364
GI number: 77456364
Start: 164533
End: 165900
Strand: Direct
Name: aprE [H]
Synonym: Pfl01_0136
Alternate gene names: 77456364
Gene position: 164533-165900 (Clockwise)
Preceding gene: 77456363
Following gene: 77456365
Centisome position: 2.56
GC content: 61.99
Gene sequence:
>1368_bases GTGTTGCTTAAGTCGGGTTTCAAGGATTCGATCCGCCGCTACTTCAAAGGCTCGGCATCGCTGCAGGGCCAGCCGCTGCC GGAGGTCAACAAGGCCTTGATCGAGGACGCGCCACGCGTGGTGCGCCTGACGATCTGGGCGATCATCGGCTTCTTCGTGT TCCTGATGCTGTGGGCCAACTTCGCCGTCATCGACGAAGTGACCAAGGGCGACGGCAAGGCGATTCCTTCGTCGAAGATC CAGAAAATCCAGAACCTCGAGGGCGGTATCGTCTCCGAACTGTTCGTCAAGGAAGGCCAGATCGTCGAGGCCGGCGCGCC GCTGGTTCGCCTGGACGACACGCGTTTTGCGTCCAATGTCGGCGAGACCGAAGCGGATCGCCTGTCGATGCTGCTGCGGG TCGAGCGCCTGAGCGCCGAGGTCGATGACCGCCCGCTGAATTTCCCCGAGGACGTGCTCAAAGCCGTGCCGGGTCAGGCC AAGAGCGAAGAGTCGTTGTACATCAGCCGTCGCCAGCAACTGCACGATGAAGTTGGGGGGTTGCAGGAGCAGTTGATCCA GCGTCAGCAAGAGCTGCGCGAATTCACCTCGAAACAGGCGCAGTACCGCCAGCAACTCGGCCTGCAACGCCAGGAAATCA ACATGTCCGAGCCGTTGGTGGCCCAGGGCGCGGTGTCGCCGGTGGAAGTGCTGCGACTCAAGCGTGCGGAAGTGGAAACC CGTGGTCAGCTCGACGCCACCACTTTGGCGATCCCGCGCGCCGAATCGGCGATCAAGGAAGTGCAGCGCAAGATCGACGA GACCCGCGGCAAATTCCGCAGCGAAGCCCTGACTCAGCTCAACGAGGCGCGCACCGACCTGAACAAGGCCCAGGCCACCG GCAAGGCGCTGGAAGACCGGGTCAGTCGGACGCTCGTTACTTCGCCGGTGCGGGGCATCGTCAACAAGATGCTGGTCAAC ACCATCGGCGGCGTGATCCAGCCGGGCAGCGACCTGTTGGAAATCGTGCCGCTGGACGACACCCTGCTGGTCGAAGCGAA GATTCGCCCGCAGGACATCGCGTTCCTGCATCCTGGCCAGGAAGCCACGGTGAAATTCACCGCGTATGACTACACCATCT ACGGCGGTCTCAAAGCCAAGCTGGAACAGATCGGCGCCGACACCATCACCGACGAAGACAAGAAAACCACCTACTACGTC ATCAAGCTGCGCACCGAGCGCAGCCATCTCGGCACCGACGAGAAGCCGTTGCTGATCATCCCGGGGATGGTGGCGTCGGT GGACATCATCACCGGCAAGAAGACCGTGTTGAGCTATCTGCTCAAGCCAATCATCCGGGCGCGCGCCGAGGCGTTGCACG AACGGTAA
Upstream 100 bases:
>100_bases CTGTCGCTGGTCGACCGCCTGCTGGTGGTCGACCGTGGACAGATCCTCGCCGACGGCCCGAAAGCGGCCGTCATGGAAGC GTTGAAGAAGGGGCAGATCA
Downstream 100 bases:
>100_bases ATCTTCACGGACGCCTTCGAGGGACTCGCGGAGGCGTTCGTCGCACCAACACATTCCGTCCAGAAGTGACACAAATGGTC ACTCACCATCCAGTCCATTC
Product: Type I secretion membrane fusion protein, HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MLLKSGFKDSIRRYFKGSASLQGQPLPEVNKALIEDAPRVVRLTIWAIIGFFVFLMLWANFAVIDEVTKGDGKAIPSSKI QKIQNLEGGIVSELFVKEGQIVEAGAPLVRLDDTRFASNVGETEADRLSMLLRVERLSAEVDDRPLNFPEDVLKAVPGQA KSEESLYISRRQQLHDEVGGLQEQLIQRQQELREFTSKQAQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVET RGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKMLVN TIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYV IKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLSYLLKPIIRARAEALHER
Sequences:
>Translated_455_residues MLLKSGFKDSIRRYFKGSASLQGQPLPEVNKALIEDAPRVVRLTIWAIIGFFVFLMLWANFAVIDEVTKGDGKAIPSSKI QKIQNLEGGIVSELFVKEGQIVEAGAPLVRLDDTRFASNVGETEADRLSMLLRVERLSAEVDDRPLNFPEDVLKAVPGQA KSEESLYISRRQQLHDEVGGLQEQLIQRQQELREFTSKQAQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVET RGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKMLVN TIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYV IKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLSYLLKPIIRARAEALHER >Mature_455_residues MLLKSGFKDSIRRYFKGSASLQGQPLPEVNKALIEDAPRVVRLTIWAIIGFFVFLMLWANFAVIDEVTKGDGKAIPSSKI QKIQNLEGGIVSELFVKEGQIVEAGAPLVRLDDTRFASNVGETEADRLSMLLRVERLSAEVDDRPLNFPEDVLKAVPGQA KSEESLYISRRQQLHDEVGGLQEQLIQRQQELREFTSKQAQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVET RGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKMLVN TIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYV IKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLSYLLKPIIRARAEALHER
Specific function: Involved in the secretion of alkaline protease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 50715; Mature: 50715
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKSGFKDSIRRYFKGSASLQGQPLPEVNKALIEDAPRVVRLTIWAIIGFFVFLMLWAN CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC FAVIDEVTKGDGKAIPSSKIQKIQNLEGGIVSELFVKEGQIVEAGAPLVRLDDTRFASNV HHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEEECCCHHHHCC GETEADRLSMLLRVERLSAEVDDRPLNFPEDVLKAVPGQAKSEESLYISRRQQLHDEVGG CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC LQEQLIQRQQELREFTSKQAQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVET HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHH RGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDR CCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRTLVTSPVRGIVNKMLVNTIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEECCCC EATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYVIKLRTERSHLGTDEKPLLII CCEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECHHHCCCCCCCEEEE PGMVASVDIITGKKTVLSYLLKPIIRARAEALHER CCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLKSGFKDSIRRYFKGSASLQGQPLPEVNKALIEDAPRVVRLTIWAIIGFFVFLMLWAN CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC FAVIDEVTKGDGKAIPSSKIQKIQNLEGGIVSELFVKEGQIVEAGAPLVRLDDTRFASNV HHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEEECCCHHHHCC GETEADRLSMLLRVERLSAEVDDRPLNFPEDVLKAVPGQAKSEESLYISRRQQLHDEVGG CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC LQEQLIQRQQELREFTSKQAQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVET HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHH RGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDR CCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRTLVTSPVRGIVNKMLVNTIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEECCCC EATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYVIKLRTERSHLGTDEKPLLII CCEEEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECHHHCCCCCCCEEEE PGMVASVDIITGKKTVLSYLLKPIIRARAEALHER CCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]