| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is osmC [H]
Identifier: 77456325
GI number: 77456325
Start: 101933
End: 102364
Strand: Reverse
Name: osmC [H]
Synonym: Pfl01_0097
Alternate gene names: 77456325
Gene position: 102364-101933 (Counterclockwise)
Preceding gene: 77456327
Following gene: 77456324
Centisome position: 1.59
GC content: 58.33
Gene sequence:
>432_bases ATGGCTATCGTGAAGAAGGCATCCGCGCATTGGGAAGGTGACCTGAAAACCGGCATCGGCTCGATTTCCACCGAAACCGG CGTCCTGCGTGAAGCACCCTACGGCTTCAAGGCGCGCTTCGAAGGCGGCAAGGGTACCAATCCGGAAGAACTGATCGGCG CTGCCCATGCGGGCTGTTTCTCCATGGCGTTCTCGATGATTCTCGGTGACGCCGGGCTCAAGGCCGACAGCATCGACACT CAGGCTGAGGTCACTCTGGATCAGGTGGACGGCGGCTTTGCGATCACTGCAGTGAAACTGATTCTCAAGGCAAAAATTCC GGGAGCGACCCAGGCGCAGTTCGAGGAGCTGAGCAACAAGGCCAAGGAAGGTTGCCCGGTGTCCAAGGTGCTGAATGCGA AGATCAGCCTGGACGCTTCGCTAGTGAGTTAA
Upstream 100 bases:
>100_bases TTACTTGGGCTGAACTTTGTTCCGGCGTCTATCCTCAGAAGCCTTGCAGGCAAAAACCACGACGGCGCGGCGTTTCGCGC CCGATTTGAAGGAGGCACAC
Downstream 100 bases:
>100_bases GACGATTCAATCGCTTGAGCCGAATCAGAACCCGCCAGGCAAAAATGTGGTCGAATAAGTGACAGCAGCTTTCGCGCATC TTCATGCGCGCTGCTTAGAT
Product: OsmC-like protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAIVKKASAHWEGDLKTGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCFSMAFSMILGDAGLKADSIDT QAEVTLDQVDGGFAITAVKLILKAKIPGATQAQFEELSNKAKEGCPVSKVLNAKISLDASLVS
Sequences:
>Translated_143_residues MAIVKKASAHWEGDLKTGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCFSMAFSMILGDAGLKADSIDT QAEVTLDQVDGGFAITAVKLILKAKIPGATQAQFEELSNKAKEGCPVSKVLNAKISLDASLVS >Mature_142_residues AIVKKASAHWEGDLKTGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCFSMAFSMILGDAGLKADSIDTQ AEVTLDQVDGGFAITAVKLILKAKIPGATQAQFEELSNKAKEGCPVSKVLNAKISLDASLVS
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=143, Percent_Identity=60.1398601398601, Blast_Score=180, Evalue=3e-47,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 14827; Mature: 14696
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVKKASAHWEGDLKTGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCF CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH SMAFSMILGDAGLKADSIDTQAEVTLDQVDGGFAITAVKLILKAKIPGATQAQFEELSNK HHHHHHHHCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH AKEGCPVSKVLNAKISLDASLVS HHCCCCHHHHHCCHHCCCEEECC >Mature Secondary Structure AIVKKASAHWEGDLKTGIGSISTETGVLREAPYGFKARFEGGKGTNPEELIGAAHAGCF CCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHH SMAFSMILGDAGLKADSIDTQAEVTLDQVDGGFAITAVKLILKAKIPGATQAQFEELSNK HHHHHHHHCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH AKEGCPVSKVLNAKISLDASLVS HHCCCCHHHHHCCHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]