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The map label for this gene is 77456311

Identifier: 77456311

GI number: 77456311

Start: 87830

End: 88888

Strand: Reverse

Name: 77456311

Synonym: Pfl01_0083

Alternate gene names: NA

Gene position: 88888-87830 (Counterclockwise)

Preceding gene: 77456312

Following gene: 77456310

Centisome position: 1.38

GC content: 63.17

Gene sequence:

>1059_bases
ATGTCCACCCCTCTTCCTCCGCGCGGTCGCGGCACCGCCACCAACCCGCACAACCGCTTCGCGCCGAGTCGCTCGGTGGC
CGAGGATGACGGCTGGTTTCAGGAAGTGCCTTTGACCCAAGGCACCGAAGTCAGCTTTGAGACGGCAAAGACCATCATCA
CCCGCAACACCTCGCCGGATCTGCCCTTCGACCGCTCGATCAATCCCTATCGCGGCTGCGAGCATGGCTGCATTTATTGC
TACGCACGTCCCAGCCACGCCTATTGGGACATGTCGCCGGGGCTGGATTTCGAAACCAAACTGATCGCCAAAACCAACGC
GGCACAGCTACTGGAAGAACAGCTGGGGAAAAAAGGCTATCAATGCGCGCCGATCAACCTTGGCTCCAATACCGATCCCT
ATCAGCCGATCGAACGCGAACACCGGATCACCCGCCAGACCCTCGAAGTGCTGCTGCGCTACCGGCATCCGGTGACCATC
GTCACCAAGGGCTCGCTGATCCTGCGCGACCTCGACCTGCTCACCGAACTGGCGCAACAACGGCTGGTGGCGGTGATGAT
CAGCCTGACCACCCTGGACGACGAGCTCAAACGCATTCTCGAACCCCGCGCTGCAGCGCCCAAGGCCCGGTTGCGGGCGA
TCCGGGTCATGCGCGAGGCGGGGATTCCGGTCGGTGTGCTGTGTTCGCCGATGATTCCGATGATCAACGACAGCGAAATC
GAAAGCCTGCTGACCGAGGCCCACGCGGCCGGCGCCCAGAGCGCGGCCTACATGATGCTGCGCCTGCCGCTGGAGGTGGC
GCCGCTGTTCGAGGAATGGCTCGAGGCGCACTACCCGCAGCGTGCGGCGCATGTACTGAGCCTGATCCGCCAGAGCCGTG
GCGGCGAGCTGTACGACAGTCGTTTCGGTACCCGGATGCGCGGCGAGGGGCCGTTTGCCGACCTGCTCGCCCAGCGCTTC
GCCAAAGCATTGAAACGTCTTGGGCTCAATCACCGCGAAGGTTTCAACCTCGATTGCACGGCCTTCTGTCCGCCGGGTCG
CCAGATGGCGCTGATTTAG

Upstream 100 bases:

>100_bases
TCGGCCAGGTGACACAGCACAACTGACTGTTCGCCAAACGGCACTGGTCAGATCGACAGCGCCTCGATACTGTATACATA
AACAGTATCGAGGCACTGCC

Downstream 100 bases:

>100_bases
GAACAATTGGCCGATGGTTGAGCGGCAGGAATGCTTGACCGGTTTACCCCGGTCACGTTTTTTGTGACCTGGAACACACG
TTCTAGAGCGCTTGATTCAG

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSTPLPPRGRGTATNPHNRFAPSRSVAEDDGWFQEVPLTQGTEVSFETAKTIITRNTSPDLPFDRSINPYRGCEHGCIYC
YARPSHAYWDMSPGLDFETKLIAKTNAAQLLEEQLGKKGYQCAPINLGSNTDPYQPIEREHRITRQTLEVLLRYRHPVTI
VTKGSLILRDLDLLTELAQQRLVAVMISLTTLDDELKRILEPRAAAPKARLRAIRVMREAGIPVGVLCSPMIPMINDSEI
ESLLTEAHAAGAQSAAYMMLRLPLEVAPLFEEWLEAHYPQRAAHVLSLIRQSRGGELYDSRFGTRMRGEGPFADLLAQRF
AKALKRLGLNHREGFNLDCTAFCPPGRQMALI

Sequences:

>Translated_352_residues
MSTPLPPRGRGTATNPHNRFAPSRSVAEDDGWFQEVPLTQGTEVSFETAKTIITRNTSPDLPFDRSINPYRGCEHGCIYC
YARPSHAYWDMSPGLDFETKLIAKTNAAQLLEEQLGKKGYQCAPINLGSNTDPYQPIEREHRITRQTLEVLLRYRHPVTI
VTKGSLILRDLDLLTELAQQRLVAVMISLTTLDDELKRILEPRAAAPKARLRAIRVMREAGIPVGVLCSPMIPMINDSEI
ESLLTEAHAAGAQSAAYMMLRLPLEVAPLFEEWLEAHYPQRAAHVLSLIRQSRGGELYDSRFGTRMRGEGPFADLLAQRF
AKALKRLGLNHREGFNLDCTAFCPPGRQMALI
>Mature_351_residues
STPLPPRGRGTATNPHNRFAPSRSVAEDDGWFQEVPLTQGTEVSFETAKTIITRNTSPDLPFDRSINPYRGCEHGCIYCY
ARPSHAYWDMSPGLDFETKLIAKTNAAQLLEEQLGKKGYQCAPINLGSNTDPYQPIEREHRITRQTLEVLLRYRHPVTIV
TKGSLILRDLDLLTELAQQRLVAVMISLTTLDDELKRILEPRAAAPKARLRAIRVMREAGIPVGVLCSPMIPMINDSEIE
SLLTEAHAAGAQSAAYMMLRLPLEVAPLFEEWLEAHYPQRAAHVLSLIRQSRGGELYDSRFGTRMRGEGPFADLLAQRFA
KALKRLGLNHREGFNLDCTAFCPPGRQMALI

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39445; Mature: 39314

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLPPRGRGTATNPHNRFAPSRSVAEDDGWFQEVPLTQGTEVSFETAKTIITRNTSPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHEECCCCCC
LPFDRSINPYRGCEHGCIYCYARPSHAYWDMSPGLDFETKLIAKTNAAQLLEEQLGKKGY
CCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHCCHHHHHHHHHCCCCC
QCAPINLGSNTDPYQPIEREHRITRQTLEVLLRYRHPVTIVTKGSLILRDLDLLTELAQQ
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
RLVAVMISLTTLDDELKRILEPRAAAPKARLRAIRVMREAGIPVGVLCSPMIPMINDSEI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEHHCCCCCCCCHHHH
ESLLTEAHAAGAQSAAYMMLRLPLEVAPLFEEWLEAHYPQRAAHVLSLIRQSRGGELYDS
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
RFGTRMRGEGPFADLLAQRFAKALKRLGLNHREGFNLDCTAFCPPGRQMALI
HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEECC
>Mature Secondary Structure 
STPLPPRGRGTATNPHNRFAPSRSVAEDDGWFQEVPLTQGTEVSFETAKTIITRNTSPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHEECCCCCC
LPFDRSINPYRGCEHGCIYCYARPSHAYWDMSPGLDFETKLIAKTNAAQLLEEQLGKKGY
CCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHCCHHHHHHHHHCCCCC
QCAPINLGSNTDPYQPIEREHRITRQTLEVLLRYRHPVTIVTKGSLILRDLDLLTELAQQ
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH
RLVAVMISLTTLDDELKRILEPRAAAPKARLRAIRVMREAGIPVGVLCSPMIPMINDSEI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEHHCCCCCCCCHHHH
ESLLTEAHAAGAQSAAYMMLRLPLEVAPLFEEWLEAHYPQRAAHVLSLIRQSRGGELYDS
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
RFGTRMRGEGPFADLLAQRFAKALKRLGLNHREGFNLDCTAFCPPGRQMALI
HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]