| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ctaG [H]
Identifier: 77456305
GI number: 77456305
Start: 80810
End: 81361
Strand: Reverse
Name: ctaG [H]
Synonym: Pfl01_0077
Alternate gene names: 77456305
Gene position: 81361-80810 (Counterclockwise)
Preceding gene: 77456306
Following gene: 77456304
Centisome position: 1.26
GC content: 59.6
Gene sequence:
>552_bases ATGGCTGACTCGATTTCGATGAAGAAGCTGGTCACCCGACTGCTCGGCGTGGTGGTGGCGATGTTCGTCTTCGGCTTTGC CCTGGTGCCGATCTACGACGTGATGTGCAAGGCGTTCGGCATCAACGGCAAAACCGCCGGACAGTACGAGGGCGAGCAGA CCGTCGATGCTTCGCGGCAGGTGCGGGTGCAGTTTCTGTCGACCAACACCGCCGACATGCCATGGGATTTCTACCCCAAG CATGACGAGCTGACGGCCAACCCCGGCGCGGTGAACGAGATGATCTTCATCGCGCGCAACCCCACCGACAAACCAATGAG CGCTCAAGCCGTACCAAGCATCGCACCGAGCAATGCGGCGGCGTATTTCCACAAGACCGAATGCTTTTGCTTTACCCAGC AGGTGCTGCAGCCCGGTCAGCAGATCGAGATGCCGGTGCGTTTCATCGTTGACCGCGACATGCCCAAGGACGTGAAGCAC CTGACGCTGTCCTACACGCTGTTCGATATCACCGCCCGACATCCTCCGGTGGCTGCAAACACTGGCGGTTAA
Upstream 100 bases:
>100_bases CGAAGGTCTGGAATGGAGCGTGCCGTCACCGGCGCCGTATCACACCTTCACCACGCCGCCGGAAGTGAAATGAACCCTGT AGCCGTTGAGGGCCGCCACC
Downstream 100 bases:
>100_bases GCGTGCCCGATAAGGAGAACAATAAATGGCAACTCATGAGCACTATTACGTCCCGGCCCAGAGCAAGTGGCCGATCGTCG CCACGGTGGGGATGTTCGTC
Product: cytochrome C oxidase assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MADSISMKKLVTRLLGVVVAMFVFGFALVPIYDVMCKAFGINGKTAGQYEGEQTVDASRQVRVQFLSTNTADMPWDFYPK HDELTANPGAVNEMIFIARNPTDKPMSAQAVPSIAPSNAAAYFHKTECFCFTQQVLQPGQQIEMPVRFIVDRDMPKDVKH LTLSYTLFDITARHPPVAANTGG
Sequences:
>Translated_183_residues MADSISMKKLVTRLLGVVVAMFVFGFALVPIYDVMCKAFGINGKTAGQYEGEQTVDASRQVRVQFLSTNTADMPWDFYPK HDELTANPGAVNEMIFIARNPTDKPMSAQAVPSIAPSNAAAYFHKTECFCFTQQVLQPGQQIEMPVRFIVDRDMPKDVKH LTLSYTLFDITARHPPVAANTGG >Mature_182_residues ADSISMKKLVTRLLGVVVAMFVFGFALVPIYDVMCKAFGINGKTAGQYEGEQTVDASRQVRVQFLSTNTADMPWDFYPKH DELTANPGAVNEMIFIARNPTDKPMSAQAVPSIAPSNAAAYFHKTECFCFTQQVLQPGQQIEMPVRFIVDRDMPKDVKHL TLSYTLFDITARHPPVAANTGG
Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]
COG id: COG3175
COG function: function code O; Cytochrome oxidase assembly factor
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the COX11/CtaG family [H]
Homologues:
Organism=Homo sapiens, GI4758034, Length=176, Percent_Identity=31.25, Blast_Score=107, Evalue=8e-24, Organism=Homo sapiens, GI242247057, Length=124, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI242247061, Length=124, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71990692, Length=175, Percent_Identity=32, Blast_Score=109, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6325125, Length=163, Percent_Identity=33.1288343558282, Blast_Score=101, Evalue=6e-23, Organism=Drosophila melanogaster, GI24581944, Length=155, Percent_Identity=32.9032258064516, Blast_Score=107, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007533 [H]
Pfam domain/function: PF04442 CtaG_Cox11 [H]
EC number: NA
Molecular weight: Translated: 20223; Mature: 20091
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSISMKKLVTRLLGVVVAMFVFGFALVPIYDVMCKAFGINGKTAGQYEGEQTVDASRQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCE VRVQFLSTNTADMPWDFYPKHDELTANPGAVNEMIFIARNPTDKPMSAQAVPSIAPSNAA EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE AYFHKTECFCFTQQVLQPGQQIEMPVRFIVDRDMPKDVKHLTLSYTLFDITARHPPVAAN EEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHEEEEEEEEEEECCCCCCCCC TGG CCC >Mature Secondary Structure ADSISMKKLVTRLLGVVVAMFVFGFALVPIYDVMCKAFGINGKTAGQYEGEQTVDASRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCE VRVQFLSTNTADMPWDFYPKHDELTANPGAVNEMIFIARNPTDKPMSAQAVPSIAPSNAA EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE AYFHKTECFCFTQQVLQPGQQIEMPVRFIVDRDMPKDVKHLTLSYTLFDITARHPPVAAN EEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHEEEEEEEEEEECCCCCCCCC TGG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA