| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is katE [H]
Identifier: 77456292
GI number: 77456292
Start: 69108
End: 71249
Strand: Reverse
Name: katE [H]
Synonym: Pfl01_0064
Alternate gene names: 77456292
Gene position: 71249-69108 (Counterclockwise)
Preceding gene: 77456296
Following gene: 77456287
Centisome position: 1.11
GC content: 59.8
Gene sequence:
>2142_bases ATGAGTACCAAGAAACCTGCCAATGACAAAAGCCAACTGGCCGGCACCGATACCCCGGATCGCGCCAACACCAATGCCAA ACTCGACAGCCTGGAAAAATTTCGCTCCGACGCCACCGGCCAGGCCCTGCGCACCAATCAGGGCGTGAAGGTCGCGGACA ACCAGAACACCCTCAAGGCCGGAGCTCGCGGGCCGTCGCTGCTGGAAGACTTCATCATGCGTGAAAAGATCACGCACTTT GACCATGAACGGATCCCCGAGCGCATCGTCCACGCCCGCGGCACTGGCGCCCATGGTTTCTTTCAGAGCTACGAGAACCA TTCGACGCTGACCAAGGCCGGTTTCCTGCAGGATCCGGGGAAGAAAACCCCGGTGTTCGTGCGTTTTTCCACAGTGCAGG GGCCGCGCGGTTCCGGCGACACCGTGCGTGACGTGCGTGGTTTTGCCGTGAAGTTCTTCACCGACGAAGGCAACTTCGAT CTGGTCGGCAACAACATGCCGGTATTTTTCATACAGGACGCGATCAAATTTCCCGACTTCGTCCATGCGGTAAAGCCCGA ACCGCATAACGAGATCCCCACTGGTGGCTCGGCTCACGACACCTTCTGGGACTTCGTGTCGCTGGTGCCGGAATCGGCAC ACATGGTCATCTGGGCCATGTCCGACCGGGCTATCCCGAAAAGCCTGCGCAGCATGCAGGGCTTCGGTGTGCACACCTTC CGGCTGATCAATGCCGAGGGCAAATCGCGCTTCGTCAAATTCCACTGGCGCCCTACCGCCGGCACCTGTTCTTTGGTGTG GGACGAGGCGCAAAAACTTGCGGGCAAAGACACCGACTACCATCGGCGCGATCTCTGGGAAGCCATCGAAATGGGCGACT ACCCGGAATGGGAACTCGGCGTTCAGGTCATCGAAGAGGAAAACGAACACGACTTCGATTTCGACATTCTCGACCCGACC AAGCTGATTCCCGAGGAAATTGTTCCTATCACGCCATTGGGCAAGATGACCCTCAACCGCAACCCGGACAACTTCTTCGC CGAAACCGAGCAGGTTGCGTTTTGCCCCGGCCATATCGTGCCGGGCATCGACTTCTCCAATGACCCACTGCTGCAAGGCC GGCTGTTTTCCTACACCGACACGCAGATCAGCCGACTCGGCGGGCCGAACTTTCATGAGTTGCCGATCAATCGCCCAGTG GCACCGTTCCACAACGGCCAGCGCGATGCCCAGCACCGTACGGTGATCGACAAGGGGCGCGCCTCGTATGAACCCAATTC CATCGATGGCGGCTGGCCGAAAGAAACCCCACCGGCTGCGCAGGACGGCGGGTTTGAAAGCTATCCGGAACGCATCGACG CCAACAAGATCCGCCAGCGCAGCGAGTCGTTCAGCGACCACTTCTCCCAGGCGCGGTTGTTCTTCAACAGCATGAGCGCG CACGAGAAAGAGCACATCATCGCCGCCTACAGTTTCGAACTCGGCAAGGTTGAGCGTGAATTCATCCGGGCGCGGCAAGT GAACGAGATTCTCGCCAACATCGATCTGGAGCTGGCCAAACGCGTGGCGGCCAACCTGGGTCTGCCAGCGCCAGGCAAAG GCACCGTCGACGTACCGAAAACATCGCTGGATCGCTCACCATCGTTGAGTCAGGCCAACCTGTTGCCGGAGAACATCAAG ACACGAAAAGTCGCGATCCTTGCAGCCAATGGTGTCGATGGTGCGGCAATTGATGCGATGAAGAAGGCGCTGGCGGCAGA AGGTGCGCACGCCAAACTGCTCGGCCCGACCTCGGCGCCGGTGAAGACCGCCGATGGCAAAAGCCTGGCGGTGGATGCGT CGATGGAAGGTTTGCCTTCGGTGGCGTTCGATGCGGTGTTCGTGCCGGGTGGCGCGGCGTCGGTCAAGGCGTTGAGCGGG GATGGCGTAGCGTTGCATTACCTGCTGGAGGCGTACAAACACCTGAAGGCGATTGCGCTGCAGGGTGAGGCCAAGCAGTT GCTGGATGTGCTGAAGCTGGAGGCGGATGCCGGGCTACTGGAGGGCAAGGATGTTGGCGCGCTGACCAAACCATTCTTTT CTGCGATCGGGCAGCATCGGGTATGGGATAGGGAAGCCAAGGCCAAGGCGATTCCGGCCTGA
Upstream 100 bases:
>100_bases GTCAGTCACTACTTAAGCGACTTGAAAACCCTGGGTGCCGTGCCTGGGAAACACTCAAGCGTTCCGGGGCAATCCCGGGA CAAACAGGAGTTCATGACTG
Downstream 100 bases:
>100_bases AAAAAAACCGCAGCCTGCGAAAAGCAGGTTGCGGTTAATTCAAGGTTTGCGCGGGCTCAGAACCATCTGCGCCGGCACCG TGCGCAGAATCTGTTTCTCG
Product: hydroperoxidase II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MSTKKPANDKSQLAGTDTPDRANTNAKLDSLEKFRSDATGQALRTNQGVKVADNQNTLKAGARGPSLLEDFIMREKITHF DHERIPERIVHARGTGAHGFFQSYENHSTLTKAGFLQDPGKKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFFTDEGNFD LVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHMVIWAMSDRAIPKSLRSMQGFGVHTF RLINAEGKSRFVKFHWRPTAGTCSLVWDEAQKLAGKDTDYHRRDLWEAIEMGDYPEWELGVQVIEEENEHDFDFDILDPT KLIPEEIVPITPLGKMTLNRNPDNFFAETEQVAFCPGHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFHELPINRPV APFHNGQRDAQHRTVIDKGRASYEPNSIDGGWPKETPPAAQDGGFESYPERIDANKIRQRSESFSDHFSQARLFFNSMSA HEKEHIIAAYSFELGKVEREFIRARQVNEILANIDLELAKRVAANLGLPAPGKGTVDVPKTSLDRSPSLSQANLLPENIK TRKVAILAANGVDGAAIDAMKKALAAEGAHAKLLGPTSAPVKTADGKSLAVDASMEGLPSVAFDAVFVPGGAASVKALSG DGVALHYLLEAYKHLKAIALQGEAKQLLDVLKLEADAGLLEGKDVGALTKPFFSAIGQHRVWDREAKAKAIPA
Sequences:
>Translated_713_residues MSTKKPANDKSQLAGTDTPDRANTNAKLDSLEKFRSDATGQALRTNQGVKVADNQNTLKAGARGPSLLEDFIMREKITHF DHERIPERIVHARGTGAHGFFQSYENHSTLTKAGFLQDPGKKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFFTDEGNFD LVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHMVIWAMSDRAIPKSLRSMQGFGVHTF RLINAEGKSRFVKFHWRPTAGTCSLVWDEAQKLAGKDTDYHRRDLWEAIEMGDYPEWELGVQVIEEENEHDFDFDILDPT KLIPEEIVPITPLGKMTLNRNPDNFFAETEQVAFCPGHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFHELPINRPV APFHNGQRDAQHRTVIDKGRASYEPNSIDGGWPKETPPAAQDGGFESYPERIDANKIRQRSESFSDHFSQARLFFNSMSA HEKEHIIAAYSFELGKVEREFIRARQVNEILANIDLELAKRVAANLGLPAPGKGTVDVPKTSLDRSPSLSQANLLPENIK TRKVAILAANGVDGAAIDAMKKALAAEGAHAKLLGPTSAPVKTADGKSLAVDASMEGLPSVAFDAVFVPGGAASVKALSG DGVALHYLLEAYKHLKAIALQGEAKQLLDVLKLEADAGLLEGKDVGALTKPFFSAIGQHRVWDREAKAKAIPA >Mature_712_residues STKKPANDKSQLAGTDTPDRANTNAKLDSLEKFRSDATGQALRTNQGVKVADNQNTLKAGARGPSLLEDFIMREKITHFD HERIPERIVHARGTGAHGFFQSYENHSTLTKAGFLQDPGKKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFFTDEGNFDL VGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHMVIWAMSDRAIPKSLRSMQGFGVHTFR LINAEGKSRFVKFHWRPTAGTCSLVWDEAQKLAGKDTDYHRRDLWEAIEMGDYPEWELGVQVIEEENEHDFDFDILDPTK LIPEEIVPITPLGKMTLNRNPDNFFAETEQVAFCPGHIVPGIDFSNDPLLQGRLFSYTDTQISRLGGPNFHELPINRPVA PFHNGQRDAQHRTVIDKGRASYEPNSIDGGWPKETPPAAQDGGFESYPERIDANKIRQRSESFSDHFSQARLFFNSMSAH EKEHIIAAYSFELGKVEREFIRARQVNEILANIDLELAKRVAANLGLPAPGKGTVDVPKTSLDRSPSLSQANLLPENIKT RKVAILAANGVDGAAIDAMKKALAAEGAHAKLLGPTSAPVKTADGKSLAVDASMEGLPSVAFDAVFVPGGAASVKALSGD GVALHYLLEAYKHLKAIALQGEAKQLLDVLKLEADAGLLEGKDVGALTKPFFSAIGQHRVWDREAKAKAIPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=476, Percent_Identity=42.0168067226891, Blast_Score=363, Evalue=1e-100, Organism=Escherichia coli, GI48994891, Length=695, Percent_Identity=60.2877697841727, Blast_Score=852, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=487, Percent_Identity=41.8891170431211, Blast_Score=380, Evalue=1e-105, Organism=Caenorhabditis elegans, GI25147792, Length=465, Percent_Identity=43.2258064516129, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25151141, Length=478, Percent_Identity=42.6778242677824, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6320462, Length=348, Percent_Identity=43.3908045977011, Blast_Score=301, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6321525, Length=355, Percent_Identity=42.8169014084507, Blast_Score=285, Evalue=2e-77, Organism=Drosophila melanogaster, GI17981717, Length=400, Percent_Identity=45, Blast_Score=347, Evalue=2e-95, Organism=Drosophila melanogaster, GI19920968, Length=438, Percent_Identity=41.324200913242, Blast_Score=336, Evalue=3e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 78290; Mature: 78159
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKKPANDKSQLAGTDTPDRANTNAKLDSLEKFRSDATGQALRTNQGVKVADNQNTLKA CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCEEEECCCCHHHC GARGPSLLEDFIMREKITHFDHERIPERIVHARGTGAHGFFQSYENHSTLTKAGFLQDPG CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCCCCC KKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFFTDEGNFDLVGNNMPVFFIQDAIKFPDF CCCCEEEEEEECCCCCCCCCHHHHHCCEEEEEEECCCCEEEECCCCCEEEECCHHCCCHH VHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHMVIWAMSDRAIPKSLRSMQGFGVHTF HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEE RLINAEGKSRFVKFHWRPTAGTCSLVWDEAQKLAGKDTDYHRRDLWEAIEMGDYPEWELG EEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH VQVIEEENEHDFDFDILDPTKLIPEEIVPITPLGKMTLNRNPDNFFAETEQVAFCPGHIV HHEEECCCCCCCCEECCCCHHHCHHHCCCCCCCCCEEECCCCCHHHHCCCCEEECCCCCC PGIDFSNDPLLQGRLFSYTDTQISRLGGPNFHELPINRPVAPFHNGQRDAQHRTVIDKGR CCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC ASYEPNSIDGGWPKETPPAAQDGGFESYPERIDANKIRQRSESFSDHFSQARLFFNSMSA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC HEKEHIIAAYSFELGKVEREFIRARQVNEILANIDLELAKRVAANLGLPAPGKGTVDVPK CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC TSLDRSPSLSQANLLPENIKTRKVAILAANGVDGAAIDAMKKALAAEGAHAKLLGPTSAP CCCCCCCCCCHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCC VKTADGKSLAVDASMEGLPSVAFDAVFVPGGAASVKALSGDGVALHYLLEAYKHLKAIAL CCCCCCCEEEEECCCCCCCCHHEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC QGEAKQLLDVLKLEADAGLLEGKDVGALTKPFFSAIGQHRVWDREAKAKAIPA CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure STKKPANDKSQLAGTDTPDRANTNAKLDSLEKFRSDATGQALRTNQGVKVADNQNTLKA CCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCEEEECCCCHHHC GARGPSLLEDFIMREKITHFDHERIPERIVHARGTGAHGFFQSYENHSTLTKAGFLQDPG CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCCCCC KKTPVFVRFSTVQGPRGSGDTVRDVRGFAVKFFTDEGNFDLVGNNMPVFFIQDAIKFPDF CCCCEEEEEEECCCCCCCCCHHHHHCCEEEEEEECCCCEEEECCCCCEEEECCHHCCCHH VHAVKPEPHNEIPTGGSAHDTFWDFVSLVPESAHMVIWAMSDRAIPKSLRSMQGFGVHTF HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEE RLINAEGKSRFVKFHWRPTAGTCSLVWDEAQKLAGKDTDYHRRDLWEAIEMGDYPEWELG EEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH VQVIEEENEHDFDFDILDPTKLIPEEIVPITPLGKMTLNRNPDNFFAETEQVAFCPGHIV HHEEECCCCCCCCEECCCCHHHCHHHCCCCCCCCCEEECCCCCHHHHCCCCEEECCCCCC PGIDFSNDPLLQGRLFSYTDTQISRLGGPNFHELPINRPVAPFHNGQRDAQHRTVIDKGR CCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC ASYEPNSIDGGWPKETPPAAQDGGFESYPERIDANKIRQRSESFSDHFSQARLFFNSMSA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC HEKEHIIAAYSFELGKVEREFIRARQVNEILANIDLELAKRVAANLGLPAPGKGTVDVPK CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC TSLDRSPSLSQANLLPENIKTRKVAILAANGVDGAAIDAMKKALAAEGAHAKLLGPTSAP CCCCCCCCCCHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCC VKTADGKSLAVDASMEGLPSVAFDAVFVPGGAASVKALSGDGVALHYLLEAYKHLKAIAL CCCCCCCEEEEECCCCCCCCHHEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC QGEAKQLLDVLKLEADAGLLEGKDVGALTKPFFSAIGQHRVWDREAKAKAIPA CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA