| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454622
Identifier: 77454622
GI number: 77454622
Start: 59961
End: 60845
Strand: Direct
Name: 77454622
Synonym: pREL1_0055
Alternate gene names: NA
Gene position: 59961-60845 (Clockwise)
Preceding gene: 77454621
Following gene: 77454623
Centisome position: 22.08
GC content: 59.89
Gene sequence:
>885_bases GTGCTGACCGGGGATCCGAGCGAGGAAACATCGCTGTCATTGGGTGAAATCCGGAGGGCCATAGCGCAATCGTCAGTTCT GACGGCGAGACAAAAGCTCTCGTATCTGGGTGCGTGGTCGGTTCATGCTCGTGGGGCATCCCGTAATACAGCCAGGGTTG AGGGCTACAGGCAAGCGTCTGATCCTGCTGTCCACGTCTCGGCATTGCGCGCCTGCGTGAATGCGGTTGACCCGGAGCTG ATTTCGGACTTGTCGACGACGTTGATCCCCTACGAGGAATCTTCCTATTCCACGTCCTTTGAGGATGCGCTCAGGTCTGA ATTCGGGTATCCGGTGGGTTCTGCGATCAACAGGCTGGCGCTGGAATGGGATGCGAAGGTCAACCTTCCGTGGCCGATGT TGATGCACCGCGCCGTTGACAGCACAAGCAGGTATCTGGCCGTGGACAGCCTGTCGACGGTCGATCGGGGAGAGACGCGA TTGGCTGCAGCTTTGGCAGTTGCGATCCCGATGGTGGTGCGCAGCGAATTCGCCGAGATCGGTGTTCGGGGTCGCTATAT TTTATTGTGGCGGGGGCTGGGGAAGTTCGGGGTAAGCCCGCGGCGCGACGTTTGGCCTGAACTAGCGGCTCGCCGGGCAC CTCATGATTACAGCGCGCAGCCGCTGTCGTCGTTTACGACCAAATTGGAGGTTGCCTTGGATTTCGCGCGTGACGGTGAG GGGATTTTGTTGGCTGAGTTGGTTCCGCTATCGGCCGTATTTTCGACTCCGCTGGTGATGGGGATGCAGGGATCTGAGGT GGTCGTGCGAGATCATCGCCACCGCTGGCTGGTGCCTCTCCGCCGGACCGAGGGCGCTTGGGTAGTTGACTACAGCGCAC CCTGA
Upstream 100 bases:
>100_bases TGATGACGAACCTGAACTTCCTCACCTGGTACCGGCCAGCTCGCCAGGCAAAGCAGACGCCGCTTGTCCGAACATCATTG TCGAGGGGATGTAACTACAC
Downstream 100 bases:
>100_bases TTGATTCATCTCCCCGAGCTGTCGTCCAGTCTCGCTGTTGCTTGCAGTTGCGCGCTTGCGTTGCGTGTTGGATTACCTTG TGACGGTGTAGAACTGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MLTGDPSEETSLSLGEIRRAIAQSSVLTARQKLSYLGAWSVHARGASRNTARVEGYRQASDPAVHVSALRACVNAVDPEL ISDLSTTLIPYEESSYSTSFEDALRSEFGYPVGSAINRLALEWDAKVNLPWPMLMHRAVDSTSRYLAVDSLSTVDRGETR LAAALAVAIPMVVRSEFAEIGVRGRYILLWRGLGKFGVSPRRDVWPELAARRAPHDYSAQPLSSFTTKLEVALDFARDGE GILLAELVPLSAVFSTPLVMGMQGSEVVVRDHRHRWLVPLRRTEGAWVVDYSAP
Sequences:
>Translated_294_residues MLTGDPSEETSLSLGEIRRAIAQSSVLTARQKLSYLGAWSVHARGASRNTARVEGYRQASDPAVHVSALRACVNAVDPEL ISDLSTTLIPYEESSYSTSFEDALRSEFGYPVGSAINRLALEWDAKVNLPWPMLMHRAVDSTSRYLAVDSLSTVDRGETR LAAALAVAIPMVVRSEFAEIGVRGRYILLWRGLGKFGVSPRRDVWPELAARRAPHDYSAQPLSSFTTKLEVALDFARDGE GILLAELVPLSAVFSTPLVMGMQGSEVVVRDHRHRWLVPLRRTEGAWVVDYSAP >Mature_294_residues MLTGDPSEETSLSLGEIRRAIAQSSVLTARQKLSYLGAWSVHARGASRNTARVEGYRQASDPAVHVSALRACVNAVDPEL ISDLSTTLIPYEESSYSTSFEDALRSEFGYPVGSAINRLALEWDAKVNLPWPMLMHRAVDSTSRYLAVDSLSTVDRGETR LAAALAVAIPMVVRSEFAEIGVRGRYILLWRGLGKFGVSPRRDVWPELAARRAPHDYSAQPLSSFTTKLEVALDFARDGE GILLAELVPLSAVFSTPLVMGMQGSEVVVRDHRHRWLVPLRRTEGAWVVDYSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32337; Mature: 32337
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGDPSEETSLSLGEIRRAIAQSSVLTARQKLSYLGAWSVHARGASRNTARVEGYRQAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHCCCCCCC DPAVHVSALRACVNAVDPELISDLSTTLIPYEESSYSTSFEDALRSEFGYPVGSAINRLA CCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHE LEWDAKVNLPWPMLMHRAVDSTSRYLAVDSLSTVDRGETRLAAALAVAIPMVVRSEFAEI EEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GVRGRYILLWRGLGKFGVSPRRDVWPELAARRAPHDYSAQPLSSFTTKLEVALDFARDGE CCCCCEEEEEECCHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEECCCCC GILLAELVPLSAVFSTPLVMGMQGSEVVVRDHRHRWLVPLRRTEGAWVVDYSAP CEEEEHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEEEEECCCCEEEECCCC >Mature Secondary Structure MLTGDPSEETSLSLGEIRRAIAQSSVLTARQKLSYLGAWSVHARGASRNTARVEGYRQAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHCCCCCCC DPAVHVSALRACVNAVDPELISDLSTTLIPYEESSYSTSFEDALRSEFGYPVGSAINRLA CCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHE LEWDAKVNLPWPMLMHRAVDSTSRYLAVDSLSTVDRGETRLAAALAVAIPMVVRSEFAEI EEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GVRGRYILLWRGLGKFGVSPRRDVWPELAARRAPHDYSAQPLSSFTTKLEVALDFARDGE CCCCCEEEEEECCHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEECCCCC GILLAELVPLSAVFSTPLVMGMQGSEVVVRDHRHRWLVPLRRTEGAWVVDYSAP CEEEEHHHHHHHHHHCCCEECCCCCEEEEECCCCEEEEEEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA