Definition Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence.
Accession NC_007491
Length 271,577

Click here to switch to the map view.

The map label for this gene is 77454613

Identifier: 77454613

GI number: 77454613

Start: 52510

End: 52824

Strand: Direct

Name: 77454613

Synonym: pREL1_0046

Alternate gene names: NA

Gene position: 52510-52824 (Clockwise)

Preceding gene: 77454612

Following gene: 77454614

Centisome position: 19.34

GC content: 59.05

Gene sequence:

>315_bases
ATGATTATCACGATCATCGTATTGGCAGTGACGAGCTATCTCCTGGTGTTCGGTGCCTTCTACATCTTGGATGACGGGGC
GAAGTTCTATCTGCCGCCCATGGTTGGGGCGCTCGTCGTTCCCACGTTGACGCTCGGGAGTTTCCGTGTAATCACGGACG
AGAAGACCTCGGGCGCAGTCCAGCTCGGCATACTTGCGGCCGCATTCCCTCTCTCCATAGCCCTCGTCGTTGCCGCGATG
TGGACTGCCATGTTCGCGCGCAATCGCGTCGACACCAACCGCAGTACCGCAGCCCAAAAAGGGCTCGCCACCTAG

Upstream 100 bases:

>100_bases
TTCCGTCGTGATTGTTCGTTGCTGAACGAGTGATTTGGATCTGCGTCATACGAACAGAATTCACAGACCTACAAGCCCCG
AGGGGTGAAGGAGAAGGCCA

Downstream 100 bases:

>100_bases
CCCACCCCTGCCAACCGGACCGCAGAGAAACGGACAGCCATGACACTGGAACAGCTGATCGACCGGTGGCGCCACGACGA
CCGGGGCCCCACCACGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MIITIIVLAVTSYLLVFGAFYILDDGAKFYLPPMVGALVVPTLTLGSFRVITDEKTSGAVQLGILAAAFPLSIALVVAAM
WTAMFARNRVDTNRSTAAQKGLAT

Sequences:

>Translated_104_residues
MIITIIVLAVTSYLLVFGAFYILDDGAKFYLPPMVGALVVPTLTLGSFRVITDEKTSGAVQLGILAAAFPLSIALVVAAM
WTAMFARNRVDTNRSTAAQKGLAT
>Mature_104_residues
MIITIIVLAVTSYLLVFGAFYILDDGAKFYLPPMVGALVVPTLTLGSFRVITDEKTSGAVQLGILAAAFPLSIALVVAAM
WTAMFARNRVDTNRSTAAQKGLAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11023; Mature: 11023

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITIIVLAVTSYLLVFGAFYILDDGAKFYLPPMVGALVVPTLTLGSFRVITDEKTSGAV
CHHHHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHH
QLGILAAAFPLSIALVVAAMWTAMFARNRVDTNRSTAAQKGLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MIITIIVLAVTSYLLVFGAFYILDDGAKFYLPPMVGALVVPTLTLGSFRVITDEKTSGAV
CHHHHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHH
QLGILAAAFPLSIALVVAAMWTAMFARNRVDTNRSTAAQKGLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA