Click here to switch to the map view.

The map label for this gene is 77454610

Identifier: 77454610

GI number: 77454610

Start: 50763

End: 51662

Strand: Direct

Name: 77454610

Synonym: pREL1_0043

Alternate gene names: NA

Gene position: 50763-51662 (Clockwise)

Preceding gene: 77454609

Following gene: 77454611

Centisome position: 18.69

GC content: 62.33

Gene sequence:

>900_bases
ATGAGTATCACCATGACGATCATCGTCTATACCAGCGTCGGCACAATCGGCATCTATCTCGTGGCCCTGTACTTCCTGCG
AGCCCAACCTGCCCTCACCGACGTGATGTCCAGGATGTCCGGACCCGCGCCGGAGAAGGCAAGCACAGCAGGGACATCAC
TCGTCGACGGGCTCGCCAACAAGCTCGGCCTGCGCGTACACCCCTACCTACAAGACAGTCGATTCCTCACCCTCCCCACA
TCGGACCTCTCACTGCTGCACAAAGATCCGGCGCACGTCCTCGGCGAAAAACTTGTCGCGGCATTCTTCGGTCTGTTGAT
CTTCCCGATACTGAATCTGGTTCTGACCGCGTTCGGATTGGGATTGGCATGGTCGATGCCGGCGATCCTCTCACTCGCGA
CCGCCGTCTTCCTCTTCATGATTCCCGACATCGACATTCGGCGCCGCGCCGCTGCCGCTCGCGCCGAATTCGCACAAGCC
CTCAGCTCCTACATCGACCTCGTCGCGCTATGCCGACGTGGCGGAATCGGATCCACGCAATCCCTCGAGATCGCCGCCCA
AGTCGGAGACAGCTGGGTGTTCCTACGACTCGACGAGGAACTGTACGAAGCCGGCCGCTCCGGCGAAGCGCCCTGGAGTG
CTCTCACCCGCGTCTCGCAGCAGCTCGGACTCGCAGAACTCGGCGACCTCGCAGACATCATGACGATGACAGGCGACAAA
GGCGCCAGCGTCTACACCTCACTGCGAGCCAAAGCCGCCAGCCTGCGCTCCGCACAAACCTCCGCTGAACAGTCCGCCGC
CGTCGAGGCAACAGAGAAGCTCGCCATGCCCCTCGCCGGCCTCGCCGGCCTGTTCATGGCACTACTCCTGATCCCGGCCG
TGACCGTCATCAGCGGCTAA

Upstream 100 bases:

>100_bases
ATCTGTACTGGATGAAGCAAGCCACCAAGCCGCCGACCTACCCGCGGTTCATCGGAACCAATGACCGCGTCGAACGCACT
GACCTTGTAGGAGCGCAGCG

Downstream 100 bases:

>100_bases
CCAACAACAAGAAAGGAGTGCCCTCTGAACAGGCAAAACAAAGAAGGACCCATCGACCGGACTCATCCAGTCCAGGACAA
CTGCTACACATCCAGCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSITMTIIVYTSVGTIGIYLVALYFLRAQPALTDVMSRMSGPAPEKASTAGTSLVDGLANKLGLRVHPYLQDSRFLTLPT
SDLSLLHKDPAHVLGEKLVAAFFGLLIFPILNLVLTAFGLGLAWSMPAILSLATAVFLFMIPDIDIRRRAAAARAEFAQA
LSSYIDLVALCRRGGIGSTQSLEIAAQVGDSWVFLRLDEELYEAGRSGEAPWSALTRVSQQLGLAELGDLADIMTMTGDK
GASVYTSLRAKAASLRSAQTSAEQSAAVEATEKLAMPLAGLAGLFMALLLIPAVTVISG

Sequences:

>Translated_299_residues
MSITMTIIVYTSVGTIGIYLVALYFLRAQPALTDVMSRMSGPAPEKASTAGTSLVDGLANKLGLRVHPYLQDSRFLTLPT
SDLSLLHKDPAHVLGEKLVAAFFGLLIFPILNLVLTAFGLGLAWSMPAILSLATAVFLFMIPDIDIRRRAAAARAEFAQA
LSSYIDLVALCRRGGIGSTQSLEIAAQVGDSWVFLRLDEELYEAGRSGEAPWSALTRVSQQLGLAELGDLADIMTMTGDK
GASVYTSLRAKAASLRSAQTSAEQSAAVEATEKLAMPLAGLAGLFMALLLIPAVTVISG
>Mature_298_residues
SITMTIIVYTSVGTIGIYLVALYFLRAQPALTDVMSRMSGPAPEKASTAGTSLVDGLANKLGLRVHPYLQDSRFLTLPTS
DLSLLHKDPAHVLGEKLVAAFFGLLIFPILNLVLTAFGLGLAWSMPAILSLATAVFLFMIPDIDIRRRAAAARAEFAQAL
SSYIDLVALCRRGGIGSTQSLEIAAQVGDSWVFLRLDEELYEAGRSGEAPWSALTRVSQQLGLAELGDLADIMTMTGDKG
ASVYTSLRAKAASLRSAQTSAEQSAAVEATEKLAMPLAGLAGLFMALLLIPAVTVISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31648; Mature: 31517

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITMTIIVYTSVGTIGIYLVALYFLRAQPALTDVMSRMSGPAPEKASTAGTSLVDGLAN
CCEEEEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KLGLRVHPYLQDSRFLTLPTSDLSLLHKDPAHVLGEKLVAAFFGLLIFPILNLVLTAFGL
HHCCEECCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAWSMPAILSLATAVFLFMIPDIDIRRRAAAARAEFAQALSSYIDLVALCRRGGIGSTQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SLEIAAQVGDSWVFLRLDEELYEAGRSGEAPWSALTRVSQQLGLAELGDLADIMTMTGDK
HHHHHEECCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
GASVYTSLRAKAASLRSAQTSAEQSAAVEATEKLAMPLAGLAGLFMALLLIPAVTVISG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SITMTIIVYTSVGTIGIYLVALYFLRAQPALTDVMSRMSGPAPEKASTAGTSLVDGLAN
CEEEEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KLGLRVHPYLQDSRFLTLPTSDLSLLHKDPAHVLGEKLVAAFFGLLIFPILNLVLTAFGL
HHCCEECCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAWSMPAILSLATAVFLFMIPDIDIRRRAAAARAEFAQALSSYIDLVALCRRGGIGSTQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SLEIAAQVGDSWVFLRLDEELYEAGRSGEAPWSALTRVSQQLGLAELGDLADIMTMTGDK
HHHHHEECCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
GASVYTSLRAKAASLRSAQTSAEQSAAVEATEKLAMPLAGLAGLFMALLLIPAVTVISG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA