| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
Click here to switch to the map view.
The map label for this gene is 77454595
Identifier: 77454595
GI number: 77454595
Start: 35859
End: 38096
Strand: Direct
Name: 77454595
Synonym: pREL1_0028
Alternate gene names: NA
Gene position: 35859-38096 (Clockwise)
Preceding gene: 77454594
Following gene: 77454598
Centisome position: 13.2
GC content: 61.66
Gene sequence:
>2238_bases GTGGGTGTCGGCGCCGGGGCGCCGCTGTTCGGGTATGCCGCCTTGTCCATTCCGGCGGCCGCAGGACTGTCGATAGGCGC GGTGTACGCCGGAGTCGCGGGGAAGAAAAAACAACTGCGCGATGTCGAGGTCGACGAAGTAATCGAACGACTCTGCCCCG TCATGGGCATCCCGGAAGCGACGCGGGCGGTGTTGTCGGTATCGAAGTGGAGCGGAGGGACTCCGGGCGTGCCGGGAAAA CTCACCGTGTATTACACGTCGGCGCAGCCGCTGAACGACGACACATGGTTCGACGACATTTGCGAGGTTTTCGAAGACCA GGGGTGGGGGTTCTTTGCGCTCGCCGAGCACGATCCCAACCGTCGGCGGTTGATCTTCACACCCGCAGCGGAGCCGGAAC GAGAGCCCTCTGACAGTGAAGCGGTGGCGCGTGCAAAACGCTATGTCGGGCAACTGCTGGGACCGACCGCAACAGTGACT GCGATTGATGTCGATACCAAGACCGGTGAAGTCACCTCCATGATGGTGCGGCACGAAATCGGATCGAAGCTCGTGTCTGA TGGCTATCGCACTCGTGTCGAACGCGCGATCAATGCGATGTTCCCCGGACGCTGGCGTGCAAAGTGGAACCATCACACGG ACGAGGTCACGTTCGAGCAACGTGCTGCGTTCCCCGACAGCGTTTGGCTGCCCGCCCCGGACATCGACCCGGATGTCGAT TTGTTGGCCAGCTACGACTCGGTGGAGATCCCCTACGGGGTCGACGAAGACGGCAACGAGGTGGTGTGGCGCCCCGCGAT CGATCCGAATCTGATGCTGATCGGACCTCCCGGTAGCGGCAAGACAGTGACGGCACACAACCTGTTGGTCAACTTCTCGC GCCGCGGATGGCCGATCTGGGTGCTCGATGGAAAATATGTCGAATTCCTCGGCTTCCAGGACTGGCCCAACGTCCAAGTG GTCGCCACGACCATCGAGCAGCAAGTTGCGATGGTGCATCGTGCACGCGACTTGATGGAGTACCGCTACCAGAAGATCGT CACCGGCGAGGCAACGGAAGCGGATTTCGAACCGGTGCTGGTGTTCCTCGACGAGTGGGCGGAATTCCGCGGCAATGTCG AAGACTGGTACACCTCGGTCAAACCGAAAGGCGGCCCGAGACAACCACCGGTGCTCGCCATGCTGGCGTCGATGGCACGC AAAGCGCGTACCTCGCGAGTGCATCTGGTCTTCGGTACTCAGCGTCCCGACGCGATCTACTTCCTCGGCGACATGCGCGA CAACTTCGCGATGCGCATCTCCATGGGACGGCTCTCACCTCAAGCGGCCACCATGATGTGGCAGTCTCCGACGATCGGCA CGAGCGTTCCGCGCAAGTGCCGCGGGCGAGGCACCACTGTCACCGACAACTATCAGCCGCTCGAAATCCAGTGCTACCGC GTGCCGGATCCACGAAAGACCCGTGACGGTACTCCGGACGCCGATCTCCTCGACAGGCTCCGGCCACCGGTGACCAGACA CCCGCGGTTGCTGATCGTTCCTCCGGAATCTCTCCCGGACATCGACGCCTCCGACGAAACGTCAGAACCCGCACCTCTGA CCTATTTCGACTACGTCGCCGCTGACTGGGTCCTTGCCAGTGACCGACCGGACCTCGACCCGGTACTCAAGCGAGCACGG ATGAACCGCGATACCGATCGCCGAATCGCATCGCCGACCGCATTGTTGGGTCTGTTGGGGGCGCCCGAAACTCCGACGAA GCGACCAGCGATGGCGGACTTCGTCGACCTCGACACCTACCGCAGGCCGACGCTCGCGAAAAACGATCCCGCAGCTGCGG CGGCGTTTCTCGACAAACTGGCCGATCCTGCAATCCGAACAGAACAGTCGAACCTCGACCAGACCCGAACCAGACTCACC GTCGTCAAGGAGGCGGTCGATGATGCGGCTCTAAGCGAGGAATCGGACTATGCATTCGCCAGTGGAGACGAACACGAGGA CCAATACGGACCTGTCCAGGATGTTCGCGCCGCTGACGTGGCACTGGGTGATCTGTTGTTGATGGAGGACACCGACGAGT GGGTCGTTGTCGACACCGAACCCGAGCCCGACATCATCGAAGACTCGTTGCTCTCGTTGACCTGGCGCAGTGACACCGAC GAGGTGGGCGATCTTGCGATTCCGGACAGTTCCTACGTCTCGATCCGCAAGCCTGTTCAGGTACCTGAACTGGTGTGA
Upstream 100 bases:
>100_bases AAAGGCTCCCGCCAGATTCGCTCGTACCCCTCGCATAAGTTCACTGCCGGCGCGGTCGCGGACTTGGGTTCGCGACAGCT TCTGTCTCGGAAGCGCGGCG
Downstream 100 bases:
>100_bases CCTCAGTCGAGCTCGGCCGGCACCCACTGCCGCGCGGCGGGGTCCCATGTCCCTGTGGATCTCCGCCCCGACAGCAATGG AGACAGTGCACGGCTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Translocase; FtsK/SpoIIIE Family Protein; FtsK /SpoIIIE Family Protein; Conjugative Transfer Protein
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MGVGAGAPLFGYAALSIPAAAGLSIGAVYAGVAGKKKQLRDVEVDEVIERLCPVMGIPEATRAVLSVSKWSGGTPGVPGK LTVYYTSAQPLNDDTWFDDICEVFEDQGWGFFALAEHDPNRRRLIFTPAAEPEREPSDSEAVARAKRYVGQLLGPTATVT AIDVDTKTGEVTSMMVRHEIGSKLVSDGYRTRVERAINAMFPGRWRAKWNHHTDEVTFEQRAAFPDSVWLPAPDIDPDVD LLASYDSVEIPYGVDEDGNEVVWRPAIDPNLMLIGPPGSGKTVTAHNLLVNFSRRGWPIWVLDGKYVEFLGFQDWPNVQV VATTIEQQVAMVHRARDLMEYRYQKIVTGEATEADFEPVLVFLDEWAEFRGNVEDWYTSVKPKGGPRQPPVLAMLASMAR KARTSRVHLVFGTQRPDAIYFLGDMRDNFAMRISMGRLSPQAATMMWQSPTIGTSVPRKCRGRGTTVTDNYQPLEIQCYR VPDPRKTRDGTPDADLLDRLRPPVTRHPRLLIVPPESLPDIDASDETSEPAPLTYFDYVAADWVLASDRPDLDPVLKRAR MNRDTDRRIASPTALLGLLGAPETPTKRPAMADFVDLDTYRRPTLAKNDPAAAAAFLDKLADPAIRTEQSNLDQTRTRLT VVKEAVDDAALSEESDYAFASGDEHEDQYGPVQDVRAADVALGDLLLMEDTDEWVVVDTEPEPDIIEDSLLSLTWRSDTD EVGDLAIPDSSYVSIRKPVQVPELV
Sequences:
>Translated_745_residues MGVGAGAPLFGYAALSIPAAAGLSIGAVYAGVAGKKKQLRDVEVDEVIERLCPVMGIPEATRAVLSVSKWSGGTPGVPGK LTVYYTSAQPLNDDTWFDDICEVFEDQGWGFFALAEHDPNRRRLIFTPAAEPEREPSDSEAVARAKRYVGQLLGPTATVT AIDVDTKTGEVTSMMVRHEIGSKLVSDGYRTRVERAINAMFPGRWRAKWNHHTDEVTFEQRAAFPDSVWLPAPDIDPDVD LLASYDSVEIPYGVDEDGNEVVWRPAIDPNLMLIGPPGSGKTVTAHNLLVNFSRRGWPIWVLDGKYVEFLGFQDWPNVQV VATTIEQQVAMVHRARDLMEYRYQKIVTGEATEADFEPVLVFLDEWAEFRGNVEDWYTSVKPKGGPRQPPVLAMLASMAR KARTSRVHLVFGTQRPDAIYFLGDMRDNFAMRISMGRLSPQAATMMWQSPTIGTSVPRKCRGRGTTVTDNYQPLEIQCYR VPDPRKTRDGTPDADLLDRLRPPVTRHPRLLIVPPESLPDIDASDETSEPAPLTYFDYVAADWVLASDRPDLDPVLKRAR MNRDTDRRIASPTALLGLLGAPETPTKRPAMADFVDLDTYRRPTLAKNDPAAAAAFLDKLADPAIRTEQSNLDQTRTRLT VVKEAVDDAALSEESDYAFASGDEHEDQYGPVQDVRAADVALGDLLLMEDTDEWVVVDTEPEPDIIEDSLLSLTWRSDTD EVGDLAIPDSSYVSIRKPVQVPELV >Mature_744_residues GVGAGAPLFGYAALSIPAAAGLSIGAVYAGVAGKKKQLRDVEVDEVIERLCPVMGIPEATRAVLSVSKWSGGTPGVPGKL TVYYTSAQPLNDDTWFDDICEVFEDQGWGFFALAEHDPNRRRLIFTPAAEPEREPSDSEAVARAKRYVGQLLGPTATVTA IDVDTKTGEVTSMMVRHEIGSKLVSDGYRTRVERAINAMFPGRWRAKWNHHTDEVTFEQRAAFPDSVWLPAPDIDPDVDL LASYDSVEIPYGVDEDGNEVVWRPAIDPNLMLIGPPGSGKTVTAHNLLVNFSRRGWPIWVLDGKYVEFLGFQDWPNVQVV ATTIEQQVAMVHRARDLMEYRYQKIVTGEATEADFEPVLVFLDEWAEFRGNVEDWYTSVKPKGGPRQPPVLAMLASMARK ARTSRVHLVFGTQRPDAIYFLGDMRDNFAMRISMGRLSPQAATMMWQSPTIGTSVPRKCRGRGTTVTDNYQPLEIQCYRV PDPRKTRDGTPDADLLDRLRPPVTRHPRLLIVPPESLPDIDASDETSEPAPLTYFDYVAADWVLASDRPDLDPVLKRARM NRDTDRRIASPTALLGLLGAPETPTKRPAMADFVDLDTYRRPTLAKNDPAAAAAFLDKLADPAIRTEQSNLDQTRTRLTV VKEAVDDAALSEESDYAFASGDEHEDQYGPVQDVRAADVALGDLLLMEDTDEWVVVDTEPEPDIIEDSLLSLTWRSDTDE VGDLAIPDSSYVSIRKPVQVPELV
Specific function: Unknown
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82566; Mature: 82435
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGAGAPLFGYAALSIPAAAGLSIGAVYAGVAGKKKQLRDVEVDEVIERLCPVMGIPEA CCCCCCCCHHHHHHHHCCHHCCCHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCHH TRAVLSVSKWSGGTPGVPGKLTVYYTSAQPLNDDTWFDDICEVFEDQGWGFFALAEHDPN HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC RRRLIFTPAAEPEREPSDSEAVARAKRYVGQLLGPTATVTAIDVDTKTGEVTSMMVRHEI CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHH GSKLVSDGYRTRVERAINAMFPGRWRAKWNHHTDEVTFEQRAAFPDSVWLPAPDIDPDVD HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCHH LLASYDSVEIPYGVDEDGNEVVWRPAIDPNLMLIGPPGSGKTVTAHNLLVNFSRRGWPIW HHCCCCCEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEEEEEECCCCCEEE VLDGKYVEFLGFQDWPNVQVVATTIEQQVAMVHRARDLMEYRYQKIVTGEATEADFEPVL EECCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VFLDEWAEFRGNVEDWYTSVKPKGGPRQPPVLAMLASMARKARTSRVHLVFGTQRPDAIY HHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEE FLGDMRDNFAMRISMGRLSPQAATMMWQSPTIGTSVPRKCRGRGTTVTDNYQPLEIQCYR EEECCCCCEEEEEEECCCCCHHHHEEECCCCCCCCCCHHHCCCCCEECCCCCCEEEEEEE VPDPRKTRDGTPDADLLDRLRPPVTRHPRLLIVPPESLPDIDASDETSEPAPLTYFDYVA CCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHH ADWVLASDRPDLDPVLKRARMNRDTDRRIASPTALLGLLGAPETPTKRPAMADFVDLDTY HCEEEECCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCC RRPTLAKNDPAAAAAFLDKLADPAIRTEQSNLDQTRTRLTVVKEAVDDAALSEESDYAFA CCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEC SGDEHEDQYGPVQDVRAADVALGDLLLMEDTDEWVVVDTEPEPDIIEDSLLSLTWRSDTD CCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCHHHHHHHEEEECCCCC EVGDLAIPDSSYVSIRKPVQVPELV CCCCEECCCCCCEEEECCCCCCCCC >Mature Secondary Structure GVGAGAPLFGYAALSIPAAAGLSIGAVYAGVAGKKKQLRDVEVDEVIERLCPVMGIPEA CCCCCCCHHHHHHHHCCHHCCCHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCHH TRAVLSVSKWSGGTPGVPGKLTVYYTSAQPLNDDTWFDDICEVFEDQGWGFFALAEHDPN HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC RRRLIFTPAAEPEREPSDSEAVARAKRYVGQLLGPTATVTAIDVDTKTGEVTSMMVRHEI CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHH GSKLVSDGYRTRVERAINAMFPGRWRAKWNHHTDEVTFEQRAAFPDSVWLPAPDIDPDVD HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCHH LLASYDSVEIPYGVDEDGNEVVWRPAIDPNLMLIGPPGSGKTVTAHNLLVNFSRRGWPIW HHCCCCCEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEEEEEECCCCCEEE VLDGKYVEFLGFQDWPNVQVVATTIEQQVAMVHRARDLMEYRYQKIVTGEATEADFEPVL EECCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VFLDEWAEFRGNVEDWYTSVKPKGGPRQPPVLAMLASMARKARTSRVHLVFGTQRPDAIY HHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEE FLGDMRDNFAMRISMGRLSPQAATMMWQSPTIGTSVPRKCRGRGTTVTDNYQPLEIQCYR EEECCCCCEEEEEEECCCCCHHHHEEECCCCCCCCCCHHHCCCCCEECCCCCCEEEEEEE VPDPRKTRDGTPDADLLDRLRPPVTRHPRLLIVPPESLPDIDASDETSEPAPLTYFDYVA CCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHH ADWVLASDRPDLDPVLKRARMNRDTDRRIASPTALLGLLGAPETPTKRPAMADFVDLDTY HCEEEECCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCC RRPTLAKNDPAAAAAFLDKLADPAIRTEQSNLDQTRTRLTVVKEAVDDAALSEESDYAFA CCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEC SGDEHEDQYGPVQDVRAADVALGDLLLMEDTDEWVVVDTEPEPDIIEDSLLSLTWRSDTD CCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCHHHHHHHEEEECCCCC EVGDLAIPDSSYVSIRKPVQVPELV CCCCEECCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA