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The map label for this gene is yebA [H]

Identifier: 77454591

GI number: 77454591

Start: 30999

End: 32714

Strand: Direct

Name: yebA [H]

Synonym: pREL1_0024

Alternate gene names: 77454591

Gene position: 30999-32714 (Clockwise)

Preceding gene: 77454590

Following gene: 77454592

Centisome position: 11.41

GC content: 61.25

Gene sequence:

>1716_bases
ATGACGCTCCTCGCCGCACCACCGTCCCCCGATTCGGAAAGTTCGTCGAAGAAGTGGTGGTGGATCCTCATCTCCGTGCC
GATCGTGTGCATGGTCGTGCTGATGGCGCCGATTCTCGTCATCTTGTCCCTCACCGGTGAGGACACCACCTGCGGTCAGC
CGACCGGTACCGACATTCGTGCAGACGGATCGTTGGTAGGTCTGAAACCCGGATCTCTGGCAGTTCCGATGGCCGAAGGT
ACGTACACGATCAGCTCGCCGTTCGGCATGCGAGAAGGCGAAATGCATGACGGACAAGATTACGCGGCCCCGCTGGATAC
CCCCTTCTACGCTGCAGGAGACGGTGAAGTCGTCGTCGCTGGACCGGCCTCGGGCTACGGACACTGGATCCGCATCCGGC
ACACCATCGACGGGCAGACCGTCGAATCTCTCTACGGGCACATGACCGCAGCAGGAGTGCTCGTCAAAGCCGGCGACAAG
GTCACCGCAGGCCAACTCATCGGCAAAGTCGGCAGCGAAGGACAATCCAGCGGTCCGCACCTGCACTTTGGTATCTACCC
AGGACAATGGTCGATGGGCGGTGGAGTCGACCCGGTTCCCTGGCTCAAGCAACGAGGAACCGCCTCCCCTGCAGCAGCCT
CCGCCCCAACTCAGCCCGATGCAGAGTTGGTGGCGAAATCCACCCCCGCCGGCACGGGCGGTCTCAACGCAAGCCAAACG
GCGCTGGCGAAACAAGCTGTCGCCATAGGCGAGTCCATGGGCGTTCCTGATCAAGGAATCGTAGTTGCCTTGGCCACCAT
GAGCCAGGAATCGACCTACCGAATGCTCGCCAGCTCCAACGTGCCCGAGTCGCTGCAATATCCCCACGACGGCGTCGGAA
GCGACCACCTCTCGGTCAATCAATACCAACAACAAGTCGGCATCTGGGGCACCGCGGAAGACCTGATGAACCCCGTAACG
GCGAACGTCAAATTCTTTGACGCGTTGCTCAAAGTTTCGGGCTGGCAATCCATGCCAGTCACCGTCGCCGCCCAAACCGT
GCAGGGATCGGCTCACCCGGAGGCATACGCCGACGACGAAACGCTCGCTCGGCAACTAGCTTCGCAGTTCAAAGGTTCAG
GTAAAGACCTGACGCCGCAGGAGCTGGCAGACATCGTCAAGGGTGGCGCCGCAACAACGATCATCGACGGCGGCGCCTGC
GCGCCTGGGACCTCGAACCCCGGTGGACCTCAGTTCAAGCCGGGTGGGCCGTTCGGAGCGAACGTGATCGCTGCGGCCTC
CCAATGGATCGGAACAACGTACGCGTGGGGAGGCGGAGATCAGAACGGTCCAACGAAAGGCATCAGTGATGGTGGCGGGG
CAGGAGATGCGAACGGCGATTCGAACAAGGTCGGCTTCGACTGCTCAGGCTTGACGTTGTACGCGGTTTACCAAGCCTCC
GGTGGCCAAATTTTGCTCCCTCACTTCACCGGAAGTCATTCCAACCCCGGCCAGCTGTACGACTCCCGCGGCCAAGACAT
TCCGTTCGACCAGAAGCGCCCAGGTGACCTGATCTACTTCGGCGCAGGCGGCGACACCCATCACGTCGGCATTTTCTACG
GCACCGAAAACGGTCAGGACATGTTGCTCAACGCCCCGGAATCGGGGAAAAGCGTCTCGATCATGCCGCTCTCCGGCTGG
GCCGGCGAAGAGATGTACGTCAAACGATTCGGATAG

Upstream 100 bases:

>100_bases
CCGGCTCCAGAACTGCCGGACTGATGGCGGCGGCAGCTCAAGCAGGAGCGGGTAACGCGAGGACCCCGCAGCCGAGCTCG
CTGACCCGGCGGCCTCGCTG

Downstream 100 bases:

>100_bases
GAACCTTCATAATGATTACTCGCAATCGCTCGCTCGCTCTTGCTGCTCTCACATCTGCCGCGTTGGTACTGACAGCGTGC
GGAGGAAGCGACGAACCCGA

Product: M23 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MTLLAAPPSPDSESSSKKWWWILISVPIVCMVVLMAPILVILSLTGEDTTCGQPTGTDIRADGSLVGLKPGSLAVPMAEG
TYTISSPFGMREGEMHDGQDYAAPLDTPFYAAGDGEVVVAGPASGYGHWIRIRHTIDGQTVESLYGHMTAAGVLVKAGDK
VTAGQLIGKVGSEGQSSGPHLHFGIYPGQWSMGGGVDPVPWLKQRGTASPAAASAPTQPDAELVAKSTPAGTGGLNASQT
ALAKQAVAIGESMGVPDQGIVVALATMSQESTYRMLASSNVPESLQYPHDGVGSDHLSVNQYQQQVGIWGTAEDLMNPVT
ANVKFFDALLKVSGWQSMPVTVAAQTVQGSAHPEAYADDETLARQLASQFKGSGKDLTPQELADIVKGGAATTIIDGGAC
APGTSNPGGPQFKPGGPFGANVIAAASQWIGTTYAWGGGDQNGPTKGISDGGGAGDANGDSNKVGFDCSGLTLYAVYQAS
GGQILLPHFTGSHSNPGQLYDSRGQDIPFDQKRPGDLIYFGAGGDTHHVGIFYGTENGQDMLLNAPESGKSVSIMPLSGW
AGEEMYVKRFG

Sequences:

>Translated_571_residues
MTLLAAPPSPDSESSSKKWWWILISVPIVCMVVLMAPILVILSLTGEDTTCGQPTGTDIRADGSLVGLKPGSLAVPMAEG
TYTISSPFGMREGEMHDGQDYAAPLDTPFYAAGDGEVVVAGPASGYGHWIRIRHTIDGQTVESLYGHMTAAGVLVKAGDK
VTAGQLIGKVGSEGQSSGPHLHFGIYPGQWSMGGGVDPVPWLKQRGTASPAAASAPTQPDAELVAKSTPAGTGGLNASQT
ALAKQAVAIGESMGVPDQGIVVALATMSQESTYRMLASSNVPESLQYPHDGVGSDHLSVNQYQQQVGIWGTAEDLMNPVT
ANVKFFDALLKVSGWQSMPVTVAAQTVQGSAHPEAYADDETLARQLASQFKGSGKDLTPQELADIVKGGAATTIIDGGAC
APGTSNPGGPQFKPGGPFGANVIAAASQWIGTTYAWGGGDQNGPTKGISDGGGAGDANGDSNKVGFDCSGLTLYAVYQAS
GGQILLPHFTGSHSNPGQLYDSRGQDIPFDQKRPGDLIYFGAGGDTHHVGIFYGTENGQDMLLNAPESGKSVSIMPLSGW
AGEEMYVKRFG
>Mature_570_residues
TLLAAPPSPDSESSSKKWWWILISVPIVCMVVLMAPILVILSLTGEDTTCGQPTGTDIRADGSLVGLKPGSLAVPMAEGT
YTISSPFGMREGEMHDGQDYAAPLDTPFYAAGDGEVVVAGPASGYGHWIRIRHTIDGQTVESLYGHMTAAGVLVKAGDKV
TAGQLIGKVGSEGQSSGPHLHFGIYPGQWSMGGGVDPVPWLKQRGTASPAAASAPTQPDAELVAKSTPAGTGGLNASQTA
LAKQAVAIGESMGVPDQGIVVALATMSQESTYRMLASSNVPESLQYPHDGVGSDHLSVNQYQQQVGIWGTAEDLMNPVTA
NVKFFDALLKVSGWQSMPVTVAAQTVQGSAHPEAYADDETLARQLASQFKGSGKDLTPQELADIVKGGAATTIIDGGACA
PGTSNPGGPQFKPGGPFGANVIAAASQWIGTTYAWGGGDQNGPTKGISDGGGAGDANGDSNKVGFDCSGLTLYAVYQASG
GQILLPHFTGSHSNPGQLYDSRGQDIPFDQKRPGDLIYFGAGGDTHHVGIFYGTENGQDMLLNAPESGKSVSIMPLSGWA
GEEMYVKRFG

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=139, Percent_Identity=37.410071942446, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 58955; Mature: 58824

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLAAPPSPDSESSSKKWWWILISVPIVCMVVLMAPILVILSLTGEDTTCGQPTGTDIR
CEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEE
ADGSLVGLKPGSLAVPMAEGTYTISSPFGMREGEMHDGQDYAAPLDTPFYAAGDGEVVVA
CCCCEEEECCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
GPASGYGHWIRIRHTIDGQTVESLYGHMTAAGVLVKAGDKVTAGQLIGKVGSEGQSSGPH
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHEEEEECCCCEEHHHHHHHHCCCCCCCCCE
LHFGIYPGQWSMGGGVDPVPWLKQRGTASPAAASAPTQPDAELVAKSTPAGTGGLNASQT
EEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH
ALAKQAVAIGESMGVPDQGIVVALATMSQESTYRMLASSNVPESLQYPHDGVGSDHLSVN
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCHH
QYQQQVGIWGTAEDLMNPVTANVKFFDALLKVSGWQSMPVTVAAQTVQGSAHPEAYADDE
HHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHH
TLARQLASQFKGSGKDLTPQELADIVKGGAATTIIDGGACAPGTSNPGGPQFKPGGPFGA
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
NVIAAASQWIGTTYAWGGGDQNGPTKGISDGGGAGDANGDSNKVGFDCSGLTLYAVYQAS
HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEECC
GGQILLPHFTGSHSNPGQLYDSRGQDIPFDQKRPGDLIYFGAGGDTHHVGIFYGTENGQD
CCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCE
MLLNAPESGKSVSIMPLSGWAGEEMYVKRFG
EEEECCCCCCEEEEEEECCCCCCCEEEEECC
>Mature Secondary Structure 
TLLAAPPSPDSESSSKKWWWILISVPIVCMVVLMAPILVILSLTGEDTTCGQPTGTDIR
EEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEE
ADGSLVGLKPGSLAVPMAEGTYTISSPFGMREGEMHDGQDYAAPLDTPFYAAGDGEVVVA
CCCCEEEECCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
GPASGYGHWIRIRHTIDGQTVESLYGHMTAAGVLVKAGDKVTAGQLIGKVGSEGQSSGPH
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHEEEEECCCCEEHHHHHHHHCCCCCCCCCE
LHFGIYPGQWSMGGGVDPVPWLKQRGTASPAAASAPTQPDAELVAKSTPAGTGGLNASQT
EEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH
ALAKQAVAIGESMGVPDQGIVVALATMSQESTYRMLASSNVPESLQYPHDGVGSDHLSVN
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCHH
QYQQQVGIWGTAEDLMNPVTANVKFFDALLKVSGWQSMPVTVAAQTVQGSAHPEAYADDE
HHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCHH
TLARQLASQFKGSGKDLTPQELADIVKGGAATTIIDGGACAPGTSNPGGPQFKPGGPFGA
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
NVIAAASQWIGTTYAWGGGDQNGPTKGISDGGGAGDANGDSNKVGFDCSGLTLYAVYQAS
HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEEECC
GGQILLPHFTGSHSNPGQLYDSRGQDIPFDQKRPGDLIYFGAGGDTHHVGIFYGTENGQD
CCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCE
MLLNAPESGKSVSIMPLSGWAGEEMYVKRFG
EEEECCCCCCEEEEEEECCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]