| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is yceI [H]
Identifier: 76819844
GI number: 76819844
Start: 537727
End: 539163
Strand: Direct
Name: yceI [H]
Synonym: BURPS1710b_A0379
Alternate gene names: 76819844
Gene position: 537727-539163 (Clockwise)
Preceding gene: 76819227
Following gene: 76817376
Centisome position: 16.9
GC content: 70.56
Gene sequence:
>1437_bases ATGCCAGCCGCTCCCGCCGTCCCGTCGCGCGCCGCACGCGCCAGCGCCGCCGCCCGCCTCGAACGATTGCCGTTTTCCGG ATACCACAAGCTCATCTTCGTGATCATCGCGATCGCGTTCTTCTTCGATTCGGTCGACCTCGGCACGATGACTTTCGTGC TCGGCTCCATCAAGCGGGAGTTCGGCCTGTCGACGGCGACAGCCGGCCTCGTCGCGAGCGCGAGCTTCTTCGGCATGGTG CTCGGCGCGGCGGTCGCGGGGCTGCTCGCGGACCGCTTCGGCCGGCGGCCCGTCTTCCAGTGGAGCATGGTGCTATGGGG CGCGGCGTCGTACCTGTGCTCGACCGCGCAGAGCGTCGACGCGCTGATCGTCTATCGCGTGCTGCTCGGCATCGGCATGG GGATGGAATTTCCGGTCGCGCAAACGCTGCTGTCCGAGTTCGTTCCCGCCGCGAAGCGCGGCCGGCTGATCGCGCTGATG GACGGCTTCTGGCCGCTCGGCTTCATCACCGCCGGCGTCGTGTCGTACTTCGTGCTGCCGCTGTTCGGCTGGCGCACCGT GTTCGCGCTGCTCGCGCTGCCCGCCGTGTTCGTGCTCGTCGTGCGCCGGCTCGTGCCGGAATCGCCGCGCTGGCTCGAGC ATCGCGGCCGGCTCGCCGAGGCCGGGCGCGTGCTCGCGCACGTCGAGGCAAAGGTCATGAAGTCCGCGCGCGTGGCGAGC CTGCCCGCGCCGTCGCGGCTTGCCGAGCCGGCTTGCGCGCAGGGCCGCGGTGCGTTCGGCGAGATCTGGAGCCCCGCCTA CCGCCGCCGCACGACGATGGTCTGGCTGCTGTGGTTTTTCGCGCTGCTCGGTTTCTACGGGCTCACGTCGTGGCTCGGCG CGCTCCTGCAGCAAGCCGGCTTCGCCGTCACGCAATCCGTGTTCTATACGGTACTGATCTCGCTCGGCGGCATTCCGGGC TTCCTGTGCGCGGCGTGGCTCGTCGAGCGCTGGGGCCGCAAGCCGACCTGCATCGCGTCGCTCGTCGGCGGGGGCGCGAT GGCCTACGTGTACGGCCAGAGCGCGCTGTTCGGCGGCAGCGTGACGCTGCTCGTCGGCACCGGGCTCGCGATGCAGTTCT TCCTGTTCGGGATGTGGGCGGTGCTCTACACGTACACGCCGGAGCTCTACGGCACGGGCGCGCGCGCAACCGGCTCGGGT TTCGCGTCGGCGATCGGGCGGGTCGGCTCGCTGATCGGGCCGTACGCGGTCGGCATCGTGCTGCCCGTATTCGGACAAGG GGGCGTGTTCACGCTCGGCGCGCTGTCGTTCGTCGTCGCGGCACTGGCGGTGGGCGTGCTGGGAATCGAGACCCAAGGCC TGGCGCTCGAGGCGCTCGCGTCGACGCATGCCGCCGACGACGATGCGCGCGATCCCGCGGGCGCGGCGGCGAACTGA
Upstream 100 bases:
>100_bases ATGCCGCTTTCCTTCTATGGCGGCGAATAATGGTCAAGTCTACTGAGCAAGCCACGCCCCGCGCATCCCGCGCGGGGCCG CCTTCCGACCAGAGACCGCC
Downstream 100 bases:
>100_bases GCGCCGCGGCAACGCCGGCGTCGACGCCGTCGCCCGCGAATCGCCGTAGCCGATGCCGCGCCGCTGCCGATGCGGCGCCG TCAGGCCGAATCGGCCGCCT
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MPAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKREFGLSTATAGLVASASFFGMV LGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVDALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALM DGFWPLGFITAGVVSYFVLPLFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS LPAPSRLAEPACAQGRGAFGEIWSPAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAGFAVTQSVFYTVLISLGGIPG FLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGSVTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSG FASAIGRVGSLIGPYAVGIVLPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN
Sequences:
>Translated_478_residues MPAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKREFGLSTATAGLVASASFFGMV LGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVDALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALM DGFWPLGFITAGVVSYFVLPLFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS LPAPSRLAEPACAQGRGAFGEIWSPAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAGFAVTQSVFYTVLISLGGIPG FLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGSVTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSG FASAIGRVGSLIGPYAVGIVLPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN >Mature_477_residues PAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKREFGLSTATAGLVASASFFGMVL GAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVDALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALMD GFWPLGFITAGVVSYFVLPLFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVASL PAPSRLAEPACAQGRGAFGEIWSPAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAGFAVTQSVFYTVLISLGGIPGF LCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGSVTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSGF ASAIGRVGSLIGPYAVGIVLPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=472, Percent_Identity=27.3305084745763, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI7662270, Length=322, Percent_Identity=25.4658385093168, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI213021148, Length=469, Percent_Identity=25.7995735607676, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI216548223, Length=320, Percent_Identity=26.25, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI4507005, Length=384, Percent_Identity=27.0833333333333, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI262399383, Length=277, Percent_Identity=25.9927797833935, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI166197673, Length=379, Percent_Identity=29.287598944591, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI24497490, Length=366, Percent_Identity=29.7814207650273, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI302148518, Length=374, Percent_Identity=25.668449197861, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI4506999, Length=415, Percent_Identity=26.5060240963855, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI20070188, Length=399, Percent_Identity=27.8195488721804, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI24497476, Length=399, Percent_Identity=27.8195488721804, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI73695465, Length=306, Percent_Identity=24.8366013071895, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI33457322, Length=341, Percent_Identity=24.633431085044, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI11415038, Length=428, Percent_Identity=24.2990654205607, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI166064021, Length=373, Percent_Identity=25.7372654155496, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI203098995, Length=337, Percent_Identity=26.1127596439169, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI23510410, Length=300, Percent_Identity=28.3333333333333, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI31542327, Length=370, Percent_Identity=25.1351351351351, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI21553331, Length=307, Percent_Identity=24.4299674267101, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24497497, Length=401, Percent_Identity=27.431421446384, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI90669191, Length=401, Percent_Identity=26.9326683291771, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1788068, Length=452, Percent_Identity=27.6548672566372, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1788074, Length=469, Percent_Identity=26.226012793177, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1786229, Length=449, Percent_Identity=24.0534521158129, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI87082159, Length=411, Percent_Identity=25.5474452554745, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI87081723, Length=410, Percent_Identity=28.5365853658537, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87082231, Length=181, Percent_Identity=30.3867403314917, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082404, Length=181, Percent_Identity=28.7292817679558, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1789207, Length=308, Percent_Identity=29.2207792207792, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1789312, Length=294, Percent_Identity=27.5510204081633, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790463, Length=301, Percent_Identity=22.9235880398671, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI32564663, Length=487, Percent_Identity=26.2833675564682, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71989531, Length=441, Percent_Identity=23.8095238095238, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71989525, Length=441, Percent_Identity=23.8095238095238, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI193202825, Length=391, Percent_Identity=25.5754475703325, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71986689, Length=391, Percent_Identity=25.5754475703325, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17565978, Length=275, Percent_Identity=24.3636363636364, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17542342, Length=436, Percent_Identity=24.5412844036697, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17565976, Length=266, Percent_Identity=26.6917293233083, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI32565921, Length=354, Percent_Identity=24.5762711864407, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71991859, Length=422, Percent_Identity=24.4075829383886, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71996338, Length=436, Percent_Identity=25.4587155963303, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71991854, Length=422, Percent_Identity=24.4075829383886, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71988651, Length=278, Percent_Identity=26.6187050359712, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI133900837, Length=351, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI72003720, Length=352, Percent_Identity=23.0113636363636, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17554160, Length=421, Percent_Identity=22.0902612826603, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI212645980, Length=236, Percent_Identity=23.3050847457627, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320595, Length=242, Percent_Identity=30.5785123966942, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324469, Length=415, Percent_Identity=22.4096385542169, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320705, Length=409, Percent_Identity=22.7383863080685, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323653, Length=276, Percent_Identity=25.7246376811594, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI19922874, Length=407, Percent_Identity=27.2727272727273, Blast_Score=148, Evalue=9e-36, Organism=Drosophila melanogaster, GI24640198, Length=514, Percent_Identity=24.5136186770428, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640196, Length=514, Percent_Identity=24.5136186770428, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640200, Length=514, Percent_Identity=24.5136186770428, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24649618, Length=378, Percent_Identity=25.6613756613757, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI19922616, Length=395, Percent_Identity=25.8227848101266, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI62484254, Length=390, Percent_Identity=25.6410256410256, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24649616, Length=368, Percent_Identity=25, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24649622, Length=359, Percent_Identity=24.7910863509749, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24668456, Length=373, Percent_Identity=24.3967828418231, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24647365, Length=349, Percent_Identity=25.7879656160458, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI161078338, Length=349, Percent_Identity=25.7879656160458, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129657, Length=371, Percent_Identity=25.6064690026954, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24585484, Length=371, Percent_Identity=25.6064690026954, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24668440, Length=375, Percent_Identity=22.1333333333333, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI161077756, Length=466, Percent_Identity=22.3175965665236, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24584153, Length=153, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45549297, Length=339, Percent_Identity=23.8938053097345, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI21355657, Length=359, Percent_Identity=25.9052924791086, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24583789, Length=153, Percent_Identity=32.6797385620915, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI19920644, Length=300, Percent_Identity=23.6666666666667, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50495; Mature: 50364
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKRE CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FGLSTATAGLVASASFFGMVLGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVD HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALMDGFWPLGFITAGVVSYFVLP HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH LFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC LPAPSRLAEPACAQGRGAFGEIWSPAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAG CCCCHHHCCCCHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVTQSVFYTVLISLGGIPGFLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHCCCC VTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSGFASAIGRVGSLIGPYAVGIV EEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKRE CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FGLSTATAGLVASASFFGMVLGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVD HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALMDGFWPLGFITAGVVSYFVLP HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH LFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC LPAPSRLAEPACAQGRGAFGEIWSPAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAG CCCCHHHCCCCHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVTQSVFYTVLISLGGIPGFLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHCCCC VTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSGFASAIGRVGSLIGPYAVGIV EEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]