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The map label for this gene is ydhM [C]

Identifier: 76819786

GI number: 76819786

Start: 427499

End: 428215

Strand: Direct

Name: ydhM [C]

Synonym: BURPS1710b_A0282

Alternate gene names: 76819786

Gene position: 427499-428215 (Clockwise)

Preceding gene: 76819461

Following gene: 76817756

Centisome position: 13.44

GC content: 73.92

Gene sequence:

>717_bases
ATGGCAAGAACGACACGAACGGACTGGATCGCGGCGGGCCTCGCCGCGCTCGACGACGAAGGCGCGCAAGGCGTGTCGGC
CGACCGCCTCGCGCGACGCCTGGGCGTCACGCGCGGCGCGTTCTATCACCACTTCGGCAGCCGAAAGGCGTTCGTGCTCG
CGCTGCTCGCCGAATGGGAAGCCGCGTATACGACGCAGGCGATCGCGCTGCTGCAAGCCGGCGGCCCGCCCGAGGCGGCG
CTCGACCGGTATCTGGCCGCCGCGTCGCAGATGAATCCGCGCCGCGAGGCGGCAATCCGGACCTGGTCGCTGCACGAGCC
GCTCGTCGCCGAATTCCAGCGCCGCGCGGATCGCGCGCGCCTCGCCGCCGCGCATGCGTTCTGCCGGCAGACGCTGCGCA
GCGAGGCGGATGCGGCGCTGTTCGCGCAGGTGGCCTACCTGTGCTTCGTCGGCGCGCAGCAAAGCCCGCTGCCGATGGGC
CCGGACGATTTCGCGACGCTGTTCCGCTCGCTGTTCGCGCTCGGCGAGCGGCTGTCTGCGCCGGGCCTGCGCAACGACGA
ACGCGCCGTCGGGAACCCGGACGAACGCGAAGGCGCGCGCGGGCGCGACGCCGAGCCGCGAGCCGCGGGCGACGCATCGC
GCGGACGCGACGCCGCCTACCCGCCGGCGCCCGCGCGCGGCCGGCGCGGCGAACGTCAACCGAGAAACAACCGATAG

Upstream 100 bases:

>100_bases
CTCCGACGACGAGTACATGCATGGCGAGCGCGGCGACGAGGGTTGAACGAGGCCGTACAATAGCCGCCACGATCGGACCA
TACAAAGCCTGTACGTTTTC

Downstream 100 bases:

>100_bases
GCGGGATGACCGGTTTCCTCGCGATACGGATAACCGAGCGCCGCGAGAAAGCGATCGAACGCCGCGTGGTCCGCCCGCGG
CACTTGCAGGCCGACGAGGA

Product: TetR family regulatory protein

Products: NA

Alternate protein names: TetR Family Regulatory Protein; Transcriptional Regulator TetR Family

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MARTTRTDWIAAGLAALDDEGAQGVSADRLARRLGVTRGAFYHHFGSRKAFVLALLAEWEAAYTTQAIALLQAGGPPEAA
LDRYLAAASQMNPRREAAIRTWSLHEPLVAEFQRRADRARLAAAHAFCRQTLRSEADAALFAQVAYLCFVGAQQSPLPMG
PDDFATLFRSLFALGERLSAPGLRNDERAVGNPDEREGARGRDAEPRAAGDASRGRDAAYPPAPARGRRGERQPRNNR

Sequences:

>Translated_238_residues
MARTTRTDWIAAGLAALDDEGAQGVSADRLARRLGVTRGAFYHHFGSRKAFVLALLAEWEAAYTTQAIALLQAGGPPEAA
LDRYLAAASQMNPRREAAIRTWSLHEPLVAEFQRRADRARLAAAHAFCRQTLRSEADAALFAQVAYLCFVGAQQSPLPMG
PDDFATLFRSLFALGERLSAPGLRNDERAVGNPDEREGARGRDAEPRAAGDASRGRDAAYPPAPARGRRGERQPRNNR
>Mature_237_residues
ARTTRTDWIAAGLAALDDEGAQGVSADRLARRLGVTRGAFYHHFGSRKAFVLALLAEWEAAYTTQAIALLQAGGPPEAAL
DRYLAAASQMNPRREAAIRTWSLHEPLVAEFQRRADRARLAAAHAFCRQTLRSEADAALFAQVAYLCFVGAQQSPLPMGP
DDFATLFRSLFALGERLSAPGLRNDERAVGNPDEREGARGRDAEPRAAGDASRGRDAAYPPAPARGRRGERQPRNNR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25893; Mature: 25762

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTTRTDWIAAGLAALDDEGAQGVSADRLARRLGVTRGAFYHHFGSRKAFVLALLAEWE
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHH
AAYTTQAIALLQAGGPPEAALDRYLAAASQMNPRREAAIRTWSLHEPLVAEFQRRADRAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LAAAHAFCRQTLRSEADAALFAQVAYLCFVGAQQSPLPMGPDDFATLFRSLFALGERLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PGLRNDERAVGNPDEREGARGRDAEPRAAGDASRGRDAAYPPAPARGRRGERQPRNNR
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTTRTDWIAAGLAALDDEGAQGVSADRLARRLGVTRGAFYHHFGSRKAFVLALLAEWE
CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHH
AAYTTQAIALLQAGGPPEAALDRYLAAASQMNPRREAAIRTWSLHEPLVAEFQRRADRAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LAAAHAFCRQTLRSEADAALFAQVAYLCFVGAQQSPLPMGPDDFATLFRSLFALGERLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PGLRNDERAVGNPDEREGARGRDAEPRAAGDASRGRDAAYPPAPARGRRGERQPRNNR
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA