| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is cepI [H]
Identifier: 76819605
GI number: 76819605
Start: 810759
End: 811628
Strand: Direct
Name: cepI [H]
Synonym: BURPS1710b_A0618
Alternate gene names: 76819605
Gene position: 810759-811628 (Clockwise)
Preceding gene: 76818021
Following gene: 76817863
Centisome position: 25.48
GC content: 70.8
Gene sequence:
>870_bases ATGCAACCGGCCGCTTGCATCGGACTGCCGATCGATGCCGCGCCGGCCTGCGCGCCGAACGCCGCCGCCCGCCCTCGTCG CGCCTCGCGGCGAGGCCGCGCCGCGCGCGCGCATTGCCGTATCGCCGTATCGCCGCGCCTTCGTGTCGCGCAACAGCCTT CGAGACCGCGCACGCGTGCTTCTCGACCCTCACCGCTCATACGCGATCGGAACGCGCGCCGCCTTCGCGCCGACGATCGA TCCATCGGAGAACCAAGCGCCATGTCATACATCATCGCGGGCCGATTGAACGAACTGCCGCCGCACGTCCAGACCGATCT CGGCGCGTATCGCTACGACGTGTTCGTGCGCCGGCTCGGCTGGACGATCGCCGGCCACTCGCTCGACGAACATGCGGAGT GGGACGAGTTCGACGGGCCGTCGACGATTCATGTCGTCGCGCTCGACGACGCGCGCGAGATCTGCGGCTACGCACGCCTG CTGCCGACGACGGGCCCGTATCTGCTGCGCGACGTGTTTGCGCATCTGCTCGGCTCGTCGCCCGCGCCGCAATCGCCTGC CGTCTGGGAAATGTCGCGCTTCGCCGCGTCGCGGCGGCGGCGAAGCGCGACCGAGCGCGAGCCGCTCGGCATGGCGTTCT TTCCGTCGGTGCTCACGGTGGCCGCGTCGCTCGGCGCGACGCGCGTGGTCGGCGTGATGACGCCATCGATCGAACGCCTG TACCGCCGCTCGGGCATCGCGCTGCATCGCCTCGGCAACGCGATGCCGGGCGCGGGCGGCAGCCTGTCCGCATGCTCGAT CGATCTGCCGCGCCTCGCGTTCGCGCCGTTGGGCCGCAAGCAGTGCGCGGCGTGCCTGGCGATGCATTGA
Upstream 100 bases:
>100_bases CCGTGAAGGCGACGCGGCAGGGGCTCATCTTTCCATGAGCGCGCGATCCATCCGGATCCGTTAGCGCCGCCCGTTTCATC CGCCACCGCGCGCCGACGCG
Downstream 100 bases:
>100_bases CCAGGAAGGCGGGCGCATCGGGCAAGACACGCGTCTTGTCGTTTTTGCCGATGTCGACGCGCTCGCCTGACGCCATCGCC CGGTGCGTCGCGACGCCGCG
Product: N-acylhomoserine lactone synthase
Products: NA
Alternate protein names: Autoinducer synthesis protein rhlI [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQPAACIGLPIDAAPACAPNAAARPRRASRRGRAARAHCRIAVSPRLRVAQQPSRPRTRASRPSPLIRDRNARRLRADDR SIGEPSAMSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARL LPTTGPYLLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERL YRRSGIALHRLGNAMPGAGGSLSACSIDLPRLAFAPLGRKQCAACLAMH
Sequences:
>Translated_289_residues MQPAACIGLPIDAAPACAPNAAARPRRASRRGRAARAHCRIAVSPRLRVAQQPSRPRTRASRPSPLIRDRNARRLRADDR SIGEPSAMSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARL LPTTGPYLLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERL YRRSGIALHRLGNAMPGAGGSLSACSIDLPRLAFAPLGRKQCAACLAMH >Mature_289_residues MQPAACIGLPIDAAPACAPNAAARPRRASRRGRAARAHCRIAVSPRLRVAQQPSRPRTRASRPSPLIRDRNARRLRADDR SIGEPSAMSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLGWTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARL LPTTGPYLLRDVFAHLLGSSPAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERL YRRSGIALHRLGNAMPGAGGSLSACSIDLPRLAFAPLGRKQCAACLAMH
Specific function: Required for the synthesis of BHL (N-butanoyl-L- homoserine lactone), and HHL (N-hexanoyl-L-homoserine lactone) autoinducer molecules which bind to rhlR and thus acts in elastase biosynthesis regulation [H]
COG id: COG3916
COG function: function code TQ; N-acyl-L-homoserine lactone synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autoinducer synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR001690 - InterPro: IPR018311 [H]
Pfam domain/function: PF00765 Autoind_synth [H]
EC number: =2.3.1.184 [H]
Molecular weight: Translated: 31408; Mature: 31408
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: PS00949 AUTOINDUCERS_SYNTH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPAACIGLPIDAAPACAPNAAARPRRASRRGRAARAHCRIAVSPRLRVAQQPSRPRTRA CCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHCEEEEEECCCHHHCCCCCCCCCCC SRPSPLIRDRNARRLRADDRSIGEPSAMSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLG CCCCCCHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARLLPTTGPYLLRDVFAHLLGSS HHHCCCCCHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC PAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERL CCCCCCHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCHHHEEECCCHHHHHH YRRSGIALHRLGNAMPGAGGSLSACSIDLPRLAFAPLGRKQCAACLAMH HHHCCHHHHHHCCCCCCCCCCCCEEECCCCHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MQPAACIGLPIDAAPACAPNAAARPRRASRRGRAARAHCRIAVSPRLRVAQQPSRPRTRA CCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHCEEEEEECCCHHHCCCCCCCCCCC SRPSPLIRDRNARRLRADDRSIGEPSAMSYIIAGRLNELPPHVQTDLGAYRYDVFVRRLG CCCCCCHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WTIAGHSLDEHAEWDEFDGPSTIHVVALDDAREICGYARLLPTTGPYLLRDVFAHLLGSS HHHCCCCCHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC PAPQSPAVWEMSRFAASRRRRSATEREPLGMAFFPSVLTVAASLGATRVVGVMTPSIERL CCCCCCHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCHHHEEECCCHHHHHH YRRSGIALHRLGNAMPGAGGSLSACSIDLPRLAFAPLGRKQCAACLAMH HHHCCHHHHHHCCCCCCCCCCCCEEECCCCHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7604006; 8522523; 7494482; 10984043 [H]