| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is dtpA [H]
Identifier: 76819526
GI number: 76819526
Start: 1566608
End: 1568263
Strand: Direct
Name: dtpA [H]
Synonym: BURPS1710b_A1255
Alternate gene names: 76819526
Gene position: 1566608-1568263 (Clockwise)
Preceding gene: 76817306
Following gene: 76818488
Centisome position: 49.24
GC content: 67.15
Gene sequence:
>1656_bases ATGCTTGCCCCCCTCGCCACCTCCACCGCCCGATTCCCGGACAGGCGCCGATCCGCCCGGCCGCGCCGGCCGCCGCGCCG CGGCCGGCGTCTTGCCCGCCATCCGTCGCGCCGCCGCGCGCGGCGTTTCGTCCGTTCAATCCAGAGGTGCACAATGAATA CTCGCGTCTCCCAGACCCGCTCGTTCACGACGGTCTTCCTGATCGAAATGTGGGAGCGTTTCGGCTACTACGGGATGGCG GCCCTGCTCGTCCTGTTCATGGTCGACAAGCTCGGCTTCACCGACGGTCAGGCGAACCTGACCTGGGGCGCGTTCACCGC GCTCGTCTACGCGTCGCCGTCGATCGGCGGCTGGATCGGCGACAAGGTGCTGGGCGCGCGGCGCTCGATGATCATCGGCG CCGTCGTGCTGTGCGCGGGCTATCTGATGCTCGCGATTCCGAACGATCAGCTCGCGTTCATGTACACGTCGCTCGGCGTG ATCGTCGTCGGCAACGGGCTGTTCAAGTCGAACGCCGCGAACCTCGTGCGCCGCATCTACGAAGGCGACAACGCACGCAT CGATAGCGCGTTCACGATCTACTACATGGCGGTCAACATCGGCTCCACCGCGTCGATGCTCGCGACGCCGTGGATCAAGG ATCACTGGGGCTGGCACACGGCGTTCGCCGTCTGCTGCGCGGGGATGGCGCTCGGCATTCTCAACTTCGTGCTGATGCAT CGCACGCTCGCGCACATCGGCTCGCAGCCCGACGCGCAGCCCGTTCACTGGCGCCGCCTCGCCGCGGTCGCGGCGGGCGG CGTCGCGCTCGGCCTCGCGACGATGTACGTGCTCGGGCACAAGCAGCTCGCGGTCGCGAGCGTGTGGGTGGCCGCGTTCG CGATTCTCGCGATCTTCGCGTACATGATCGCGAAATCGAACCGCGCCGAGCGCTCGGGCCTCATCGCCGCGCTGCTCCTG ATCGCTCAGGTGATCCTGTTCTTCATCTTCTACGTGCAGATGCAGACGTCGCTCACGCTGTTCGCGCTGCGCAACGTCGA TCCGCGCTTCATGCTGTTCGGCACGACGCTCTTCACGTGGAGCCCCGCTCAGTTCCAGGCGCTCAATCCGATCTGGATCA TGCTGTTGAGCCCGGTGCTCGTCGCGATCTACAACGGCCTCGGCAAGCGCGGCCGCGATCTGCCCGTGGCCGGCAAGTAC GCGCTCGGCTTTGGCGTCGTCGCGCTCGGCTACCTCGCGTTCTCGATCAGCGGACGCTTCGCGGTGGACGGCCGCGTGTC GTCGTGGTTCATGGTCGCGGGCTACGGCTTCTATTCGCTCGGCGAGCTGCTCGTGAGCGGTCTCGGCCTCGCGATGATCG CGCGCTACGTGCCGGCCCGGATGGGCGGCTTCATGATGGGCGCGTACTTCGTCGCCACGGGCGTCTCTCAATATCTCGGC AGCGTCGTCGCGAACTTCGCGCAGATGCCGTCGAACGATCTGCCCGCGACCGCGTCGCTGCCGCTCTACATCGAGCTGTT CACGGGCCTCGGCTGGCTCGCGGCGGCCGGCATGGCGATCGGCCTGCTGATGCTGCCGCTGATGAACAAACTGTCGCGCG AGCATCACCGCTGCGAAGCGCAGCGCCGCGAAACGCAGGCGCTCGCCGCGCATTAA
Upstream 100 bases:
>100_bases CCCATCCGCCGCGCGCCGCGCCTCGTCTCGCGCCCGATCCGGGCGCTTGCCCGCTTGACGACATGACCACTTCCTGCACT TTCCGGCGCGCCGCGCGCGC
Downstream 100 bases:
>100_bases AGGCTCGCCTGCGCGAGACCCTGGGATCTCGCGCAGGCGAATGCCCGCAAGCGCTCGTCCGGCAAGAAGCGAGGAGCACC GTTCGGCCGGGCCGAACGCC
Product: amino acid/peptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MLAPLATSTARFPDRRRSARPRRPPRRGRRLARHPSRRRARRFVRSIQRCTMNTRVSQTRSFTTVFLIEMWERFGYYGMA ALLVLFMVDKLGFTDGQANLTWGAFTALVYASPSIGGWIGDKVLGARRSMIIGAVVLCAGYLMLAIPNDQLAFMYTSLGV IVVGNGLFKSNAANLVRRIYEGDNARIDSAFTIYYMAVNIGSTASMLATPWIKDHWGWHTAFAVCCAGMALGILNFVLMH RTLAHIGSQPDAQPVHWRRLAAVAAGGVALGLATMYVLGHKQLAVASVWVAAFAILAIFAYMIAKSNRAERSGLIAALLL IAQVILFFIFYVQMQTSLTLFALRNVDPRFMLFGTTLFTWSPAQFQALNPIWIMLLSPVLVAIYNGLGKRGRDLPVAGKY ALGFGVVALGYLAFSISGRFAVDGRVSSWFMVAGYGFYSLGELLVSGLGLAMIARYVPARMGGFMMGAYFVATGVSQYLG SVVANFAQMPSNDLPATASLPLYIELFTGLGWLAAAGMAIGLLMLPLMNKLSREHHRCEAQRRETQALAAH
Sequences:
>Translated_551_residues MLAPLATSTARFPDRRRSARPRRPPRRGRRLARHPSRRRARRFVRSIQRCTMNTRVSQTRSFTTVFLIEMWERFGYYGMA ALLVLFMVDKLGFTDGQANLTWGAFTALVYASPSIGGWIGDKVLGARRSMIIGAVVLCAGYLMLAIPNDQLAFMYTSLGV IVVGNGLFKSNAANLVRRIYEGDNARIDSAFTIYYMAVNIGSTASMLATPWIKDHWGWHTAFAVCCAGMALGILNFVLMH RTLAHIGSQPDAQPVHWRRLAAVAAGGVALGLATMYVLGHKQLAVASVWVAAFAILAIFAYMIAKSNRAERSGLIAALLL IAQVILFFIFYVQMQTSLTLFALRNVDPRFMLFGTTLFTWSPAQFQALNPIWIMLLSPVLVAIYNGLGKRGRDLPVAGKY ALGFGVVALGYLAFSISGRFAVDGRVSSWFMVAGYGFYSLGELLVSGLGLAMIARYVPARMGGFMMGAYFVATGVSQYLG SVVANFAQMPSNDLPATASLPLYIELFTGLGWLAAAGMAIGLLMLPLMNKLSREHHRCEAQRRETQALAAH >Mature_551_residues MLAPLATSTARFPDRRRSARPRRPPRRGRRLARHPSRRRARRFVRSIQRCTMNTRVSQTRSFTTVFLIEMWERFGYYGMA ALLVLFMVDKLGFTDGQANLTWGAFTALVYASPSIGGWIGDKVLGARRSMIIGAVVLCAGYLMLAIPNDQLAFMYTSLGV IVVGNGLFKSNAANLVRRIYEGDNARIDSAFTIYYMAVNIGSTASMLATPWIKDHWGWHTAFAVCCAGMALGILNFVLMH RTLAHIGSQPDAQPVHWRRLAAVAAGGVALGLATMYVLGHKQLAVASVWVAAFAILAIFAYMIAKSNRAERSGLIAALLL IAQVILFFIFYVQMQTSLTLFALRNVDPRFMLFGTTLFTWSPAQFQALNPIWIMLLSPVLVAIYNGLGKRGRDLPVAGKY ALGFGVVALGYLAFSISGRFAVDGRVSSWFMVAGYGFYSLGELLVSGLGLAMIARYVPARMGGFMMGAYFVATGVSQYLG SVVANFAQMPSNDLPATASLPLYIELFTGLGWLAAAGMAIGLLMLPLMNKLSREHHRCEAQRRETQALAAH
Specific function: Proton-dependent permease that transports di- and tripeptides [H]
COG id: COG3104
COG function: function code E; Dipeptide/tripeptide permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpA subfamily [H]
Homologues:
Organism=Homo sapiens, GI4827008, Length=404, Percent_Identity=23.019801980198, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI226371746, Length=346, Percent_Identity=23.9884393063584, Blast_Score=73, Evalue=7e-13, Organism=Escherichia coli, GI1787922, Length=490, Percent_Identity=39.3877551020408, Blast_Score=355, Evalue=3e-99, Organism=Escherichia coli, GI1789911, Length=494, Percent_Identity=37.0445344129555, Blast_Score=342, Evalue=5e-95, Organism=Escherichia coli, GI1786927, Length=503, Percent_Identity=29.4234592445328, Blast_Score=194, Evalue=2e-50, Organism=Escherichia coli, GI1790572, Length=476, Percent_Identity=31.0924369747899, Blast_Score=183, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71987453, Length=406, Percent_Identity=22.4137931034483, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17569141, Length=373, Percent_Identity=25.7372654155496, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI28571098, Length=443, Percent_Identity=24.1534988713318, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI28571102, Length=443, Percent_Identity=24.1534988713318, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571100, Length=443, Percent_Identity=24.1534988713318, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24639585, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24639583, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI24639581, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR000109 - InterPro: IPR005279 - InterPro: IPR018456 [H]
Pfam domain/function: PF00854 PTR2 [H]
EC number: NA
Molecular weight: Translated: 60438; Mature: 60438
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPLATSTARFPDRRRSARPRRPPRRGRRLARHPSRRRARRFVRSIQRCTMNTRVSQTR CCCCCCCCHHCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFTTVFLIEMWERFGYYGMAALLVLFMVDKLGFTDGQANLTWGAFTALVYASPSIGGWIG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH DKVLGARRSMIIGAVVLCAGYLMLAIPNDQLAFMYTSLGVIVVGNGLFKSNAANLVRRIY HHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHH EGDNARIDSAFTIYYMAVNIGSTASMLATPWIKDHWGWHTAFAVCCAGMALGILNFVLMH CCCCCEECCEEEEEEEEEECCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RTLAHIGSQPDAQPVHWRRLAAVAAGGVALGLATMYVLGHKQLAVASVWVAAFAILAIFA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YMIAKSNRAERSGLIAALLLIAQVILFFIFYVQMQTSLTLFALRNVDPRFMLFGTTLFTW HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECHHEEE SPAQFQALNPIWIMLLSPVLVAIYNGLGKRGRDLPVAGKYALGFGVVALGYLAFSISGRF CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE AVDGRVSSWFMVAGYGFYSLGELLVSGLGLAMIARYVPARMGGFMMGAYFVATGVSQYLG EECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVANFAQMPSNDLPATASLPLYIELFTGLGWLAAAGMAIGLLMLPLMNKLSREHHRCEA HHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRETQALAAH HHHHHHHHCCC >Mature Secondary Structure MLAPLATSTARFPDRRRSARPRRPPRRGRRLARHPSRRRARRFVRSIQRCTMNTRVSQTR CCCCCCCCHHCCCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFTTVFLIEMWERFGYYGMAALLVLFMVDKLGFTDGQANLTWGAFTALVYASPSIGGWIG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH DKVLGARRSMIIGAVVLCAGYLMLAIPNDQLAFMYTSLGVIVVGNGLFKSNAANLVRRIY HHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHH EGDNARIDSAFTIYYMAVNIGSTASMLATPWIKDHWGWHTAFAVCCAGMALGILNFVLMH CCCCCEECCEEEEEEEEEECCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RTLAHIGSQPDAQPVHWRRLAAVAAGGVALGLATMYVLGHKQLAVASVWVAAFAILAIFA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YMIAKSNRAERSGLIAALLLIAQVILFFIFYVQMQTSLTLFALRNVDPRFMLFGTTLFTW HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECHHEEE SPAQFQALNPIWIMLLSPVLVAIYNGLGKRGRDLPVAGKYALGFGVVALGYLAFSISGRF CCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE AVDGRVSSWFMVAGYGFYSLGELLVSGLGLAMIARYVPARMGGFMMGAYFVATGVSQYLG EECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVANFAQMPSNDLPATASLPLYIELFTGLGWLAAAGMAIGLLMLPLMNKLSREHHRCEA HHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRETQALAAH HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA