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The map label for this gene is speE [H]

Identifier: 76819471

GI number: 76819471

Start: 142426

End: 143256

Strand: Direct

Name: speE [H]

Synonym: BURPS1710b_A0114

Alternate gene names: 76819471

Gene position: 142426-143256 (Clockwise)

Preceding gene: 76819833

Following gene: 76817647

Centisome position: 4.48

GC content: 70.76

Gene sequence:

>831_bases
ATGCAGCCTCGCTTCCCCGGCATGCCCGCGGACGCATCCGGGCCCCTTCGCGCGCCGCACCGCTGCGCGCGCGAGAACTC
GCCCGTCGTGATCGAGACGCCGCACCTCGTCTCGCTGTGCTTCGACGAGCACGGCATGCAAAGCTGCATGTACGTCGACG
GCCCGGATCTGCTCGCGCTCGGCTACACGCGCACGATGGCGGGCTTTCTGCTGCTGCATCCGCAGCCGCGGCGCATCGCG
ATGATCGGCCTGGGCGGCGGCTCGCTCGCGAAATACTGCTATCGGCACCTGCCCGATGCGCGGATCACGTCGATCGAGAT
CAATCCGGACGTGATCGCACTGCGCGACCGGTTCCGGATTCCGCCCGACGACGCACGCTTCACCGTTTTGTGCGCGGACG
GCGCGCGCTACGTCGCCGAGGCCGGCGAAGCGTGCGCCGACGTGCTGATCGTCGACGGCTTCGACGCCGGCGGCCTGCCG
CTCGCGCTCGGCACCCGGCAGTTCTATGCGGACTGCCGCCGCCATCTGGCGGACGGCGGCGTGCTCGCCGTCAATCTGCT
CGTCGACGATCCGCGCGTGGCCGATTGCCTCGCCGCGCTGCGCGACGCGTTCGGCGCGTCGGCCGCGCTCGCGCCCGCCG
AGGACAGCGCGCTGAACCTGATCGTATTCGCGTGGAAGAGCGACGCGCCGTTGCCGTCGCTCGAGACGATGATCGAGCGC
GCGAACGCGCTGGCCGATCGGCACAGCGTCGATCTCGGCGAGGCGGCCGTGCGCATCGAGCTGGGCGCGAGCTACGACTG
GAGCCGGTTCGGCGAACCGGTCGACGCATGA

Upstream 100 bases:

>100_bases
CACGCATGCAGATCCTGTCGAGCGGCCCCGACGAGGACGACGCGCTCGATTCGCTCGCGTCGCTGCTGACCCAACGTTGA
ACGAGCGGGAGAACCAGCCG

Downstream 100 bases:

>100_bases
CGCGCGGCGCGCGAGGCGACGCCGGAAATGAGGAACGGATGAAAAAATCGACCGGGAAGCGGCATGTATTATAATTTGAT
TAACATACTCGCCACTGTGT

Product: transferase

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQPRFPGMPADASGPLRAPHRCARENSPVVIETPHLVSLCFDEHGMQSCMYVDGPDLLALGYTRTMAGFLLLHPQPRRIA
MIGLGGGSLAKYCYRHLPDARITSIEINPDVIALRDRFRIPPDDARFTVLCADGARYVAEAGEACADVLIVDGFDAGGLP
LALGTRQFYADCRRHLADGGVLAVNLLVDDPRVADCLAALRDAFGASAALAPAEDSALNLIVFAWKSDAPLPSLETMIER
ANALADRHSVDLGEAAVRIELGASYDWSRFGEPVDA

Sequences:

>Translated_276_residues
MQPRFPGMPADASGPLRAPHRCARENSPVVIETPHLVSLCFDEHGMQSCMYVDGPDLLALGYTRTMAGFLLLHPQPRRIA
MIGLGGGSLAKYCYRHLPDARITSIEINPDVIALRDRFRIPPDDARFTVLCADGARYVAEAGEACADVLIVDGFDAGGLP
LALGTRQFYADCRRHLADGGVLAVNLLVDDPRVADCLAALRDAFGASAALAPAEDSALNLIVFAWKSDAPLPSLETMIER
ANALADRHSVDLGEAAVRIELGASYDWSRFGEPVDA
>Mature_276_residues
MQPRFPGMPADASGPLRAPHRCARENSPVVIETPHLVSLCFDEHGMQSCMYVDGPDLLALGYTRTMAGFLLLHPQPRRIA
MIGLGGGSLAKYCYRHLPDARITSIEINPDVIALRDRFRIPPDDARFTVLCADGARYVAEAGEACADVLIVDGFDAGGLP
LALGTRQFYADCRRHLADGGVLAVNLLVDDPRVADCLAALRDAFGASAALAPAEDSALNLIVFAWKSDAPLPSLETMIER
ANALADRHSVDLGEAAVRIELGASYDWSRFGEPVDA

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 29682; Mature: 29682

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPRFPGMPADASGPLRAPHRCARENSPVVIETPHLVSLCFDEHGMQSCMYVDGPDLLAL
CCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCEEEEEHHHCCCCEEEEECCCCEEEE
GYTRTMAGFLLLHPQPRRIAMIGLGGGSLAKYCYRHLPDARITSIEINPDVIALRDRFRI
CHHHHHCCEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCC
PPDDARFTVLCADGARYVAEAGEACADVLIVDGFDAGGLPLALGTRQFYADCRRHLADGG
CCCCCEEEEEEECCCHHHHHHHHHHEEEEEEECCCCCCCEEEECCHHHHHHHHHHHCCCC
VLAVNLLVDDPRVADCLAALRDAFGASAALAPAEDSALNLIVFAWKSDAPLPSLETMIER
EEEEEEEECCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
ANALADRHSVDLGEAAVRIELGASYDWSRFGEPVDA
HHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCCCC
>Mature Secondary Structure
MQPRFPGMPADASGPLRAPHRCARENSPVVIETPHLVSLCFDEHGMQSCMYVDGPDLLAL
CCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCEEEEEHHHCCCCEEEEECCCCEEEE
GYTRTMAGFLLLHPQPRRIAMIGLGGGSLAKYCYRHLPDARITSIEINPDVIALRDRFRI
CHHHHHCCEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCC
PPDDARFTVLCADGARYVAEAGEACADVLIVDGFDAGGLPLALGTRQFYADCRRHLADGG
CCCCCEEEEEEECCCHHHHHHHHHHEEEEEEECCCCCCCEEEECCHHHHHHHHHHHCCCC
VLAVNLLVDDPRVADCLAALRDAFGASAALAPAEDSALNLIVFAWKSDAPLPSLETMIER
EEEEEEEECCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHH
ANALADRHSVDLGEAAVRIELGASYDWSRFGEPVDA
HHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]