| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
Click here to switch to the map view.
The map label for this gene is yhiI [H]
Identifier: 76819367
GI number: 76819367
Start: 1302699
End: 1303772
Strand: Direct
Name: yhiI [H]
Synonym: BURPS1710b_A1038
Alternate gene names: 76819367
Gene position: 1302699-1303772 (Clockwise)
Preceding gene: 76818795
Following gene: 76817959
Centisome position: 40.94
GC content: 71.23
Gene sequence:
>1074_bases ATGATCCAAGTCACCAGGAAGCAGATCGTCGCCGCGGCGGCCGTCGTCGTGGTCGCGCTCGGCGCTTACTACGGCTGGAC GCTGCTGCGCCACCAGGGCCCCGGCGACGGCTTCGCGAGCGGCAACGGCCGCATCGAGGCCACCGAGATCGACGTCGCGA CGAAGCTGCCCGGGCGCATCGATGCGATCCTCGTCGACGAGGGCGATTTCGTGAAGGCCGGCCAGCCGCTCGCGAACATG CAGATCCAGGTGCTGCGCGCGCAGTACGACGAAGCGACCGCGCAGCGGCAGCGCGCGCTGAACACCGCGGCCGGCGTGCA ATCGCAGGTCGCGCAGCGCAAGAGCGACAAGGCGGCCGCGCAGGCGATGGTCGTGCTGCGCGAAAGCGAACTCGACGCGG CCGAGCGCCGGCTCGCGCGCTCGCAAACGCTATCGCGCGAAGGCGCGTCGTCGCTGCAGGAGCTCGACGACGATCGCGCG CGCGCGCGCAGCGCGCAGGCGGCCGTGTCCGCGGCGGCCGCGCAGGTGGCCGCCGCGCAGGCCGCGATCGAGGCGACCGA GGCGCAGCTCGTCGCCGCGCATTCGGCGGTGACGGCGGCCGACGCCACCGTCGCCCGCGTGCAGGCCGACATCGACGACA GCCAGCTCGCATCGCCGCGCGACGGCCGCGTGCAGTATCGCGTCGCGCAGCCGGGCGAAGTGCTGCCGGCGGGCGGCAAG GTGCTCAATCTCGTCGACCTGTCGGACGTCTACATGACGTTCTTCCTGCCGGAGACGGTCGTCGGCCGGGTCGCGCTCGG CGCCGACGCGCGCATCATCCTCGATGCCGCGCCGAACTACGTGATTCCCGCCACCGTGTCGTTCGTGTCGAGCACCGCGC AGTTCACGCCGAAGACCGTCGAGACCGCGAACGAACGGCAGAAGCTGATGTTCCGCGTGAAGGCGCGCATCGATCGCGAG CTGCTGCAAAAGCACCTGAAGCTCGTGAAGACCGGGCTGCCCGGCGTCGCGTGGGTGCGCGTCGACCCGAGCAAGCCGTG GCCCGCGCAACTGATGGTCAAGGTTCCGCAGTGA
Upstream 100 bases:
>100_bases CGCTGTACGCGGCGCTCGGCGGGCGTCTGGACGAGCCCGCGCGCGACGGCGCCGCGCCGCGCCCCTCTCCCGAACCCTCA GCGAAACAAGGTCCGTTGTC
Downstream 100 bases:
>100_bases GCGCGCCGAGCGTCGTTCGTTTTTCCGACGTCAGCCTGCGCTACGGCAAGACCGTCGCGCTCGAGCGGATCACGCTCGAG ATCCCGGCCGGTCTCACGAT
Product: Type I antifreeze protein:HlyD family secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANM QIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRA RARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGK VLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRE LLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ
Sequences:
>Translated_357_residues MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANM QIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRA RARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGK VLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRE LLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ >Mature_357_residues MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANM QIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRA RARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGK VLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRE LLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=351, Percent_Identity=58.4045584045584, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI1787013, Length=296, Percent_Identity=27.3648648648649, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 38103; Mature: 38103
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRI CCEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCE DAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAA EEEEECCCCCEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGK HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCEEEEECCCCCCCCCCCC VLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTV EEEEEEHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEEHHHHHHHHHHHHCCCHHH ETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCC >Mature Secondary Structure MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRI CCEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCE DAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAA EEEEECCCCCEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGK HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCEEEEECCCCCCCCCCCC VLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTV EEEEEEHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEEHHHHHHHHHHHHCCCHHH ETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]