Click here to switch to the map view.

The map label for this gene is tadC

Identifier: 76819357

GI number: 76819357

Start: 1629944

End: 1630903

Strand: Direct

Name: tadC

Synonym: BURPS1710b_A1318

Alternate gene names: NA

Gene position: 1629944-1630903 (Clockwise)

Preceding gene: 76818607

Following gene: 162210117

Centisome position: 51.23

GC content: 70.0

Gene sequence:

>960_bases
ATGGAAAACCTCAACGTCATGCATATCCTGCTGCTGCTCGGCCTGTTCGCGATCGTCGTCGCGGGCGTGATGGCCACGTG
GCTCGCCTTCGCGCCGCGCGGCCTCGCGCGGCGTCTCGAGCAGATCGGCGGCGCCGGCGCGGTCGCGGCGGGCGACGGTC
GCGCGCCGCCCGCCGTCTGGATCGAGAAGCTCGCCGAGATCTCGCAGCCGATCTCGAAGCTGTCGCTGCCGAAGTCCGGC
TGGGAGAACTCGCCGCTGCGGCTGCGCCTCATCAATGCCGGATGGCGCTCGCCGGGCGCCGCGCACCTGTATTTCGCGGC
GAAGACCGTGCTCGCGCTCGCGCTGCCCGCGGCGGCGATGCCGTTGCTGATCGGCACCGCGATCGCGGACAGCCCGTACT
CGGTATCGGCGATGCTCGTGCTGATCGGCGCATTCGGCTTCTATCTGCCGAACGCGATGCTCGCGCGCCGGATCGCGGCG
CGGCAGCGGATGATCGTCGAGGATTTTCCGGACGCGCTCGATCTGCTGACCGTGTGCGTGGAAGCGGGGCTCGGCCTCGA
CGCGGCGCTGACGAAGGTCGCCGATGAGCTGCGGCTGCGCAGCCCGGTGGTCGCCGACGAGCTCGGGCTGATGCTGCTCG
AGATGCGCTCCGGCTTCACGAAGGAAACCGCGCTGCGCAACCTCGCGCTGCGCACGGGGGCCGAGGACGTCGACGCGTTC
AGCACGATGCTGATCCAGGCGGACCGCTTCGGCACGAGCATCGGCGCCTCGCTGCGCGTGCTGTCCGACACGCTGCGCAC
GCAGCGGCGCATGCGCGCGGAGGAGCGCGCGGCGAAGATCGCGCTGAAGCTGCTGTTTCCGCTGATCTTCTGCATCTTTC
CCGCGCTGCTGACGGTGCTGCTCGGGCCCGCGTTCATCCATATCTACCGGACGCTGCTGCCGACGATGGCGGGCGGCTGA

Upstream 100 bases:

>100_bases
GTTCGGCATTCTCTGGATGCGGCACATCATCCGCATTCGCGTGTGAAACGGTGCGCCGCGCATCCGGCCATCCTTCGTTG
AACGACATTCGGGGACTGTC

Downstream 100 bases:

>100_bases
ACCGCGCTCGCGGCGGCGTGGGGCGGCTTCTTTCGCCGTGCCGCCGGCGCCGCCCGGTGCTCGCCCCGCCGCGCCGACAA
CAAGAAGTCCAAAGCCGCGC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein; TadC Protein; Integral Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Transmembrane Type II Secretion Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MENLNVMHILLLLGLFAIVVAGVMATWLAFAPRGLARRLEQIGGAGAVAAGDGRAPPAVWIEKLAEISQPISKLSLPKSG
WENSPLRLRLINAGWRSPGAAHLYFAAKTVLALALPAAAMPLLIGTAIADSPYSVSAMLVLIGAFGFYLPNAMLARRIAA
RQRMIVEDFPDALDLLTVCVEAGLGLDAALTKVADELRLRSPVVADELGLMLLEMRSGFTKETALRNLALRTGAEDVDAF
STMLIQADRFGTSIGASLRVLSDTLRTQRRMRAEERAAKIALKLLFPLIFCIFPALLTVLLGPAFIHIYRTLLPTMAGG

Sequences:

>Translated_319_residues
MENLNVMHILLLLGLFAIVVAGVMATWLAFAPRGLARRLEQIGGAGAVAAGDGRAPPAVWIEKLAEISQPISKLSLPKSG
WENSPLRLRLINAGWRSPGAAHLYFAAKTVLALALPAAAMPLLIGTAIADSPYSVSAMLVLIGAFGFYLPNAMLARRIAA
RQRMIVEDFPDALDLLTVCVEAGLGLDAALTKVADELRLRSPVVADELGLMLLEMRSGFTKETALRNLALRTGAEDVDAF
STMLIQADRFGTSIGASLRVLSDTLRTQRRMRAEERAAKIALKLLFPLIFCIFPALLTVLLGPAFIHIYRTLLPTMAGG
>Mature_319_residues
MENLNVMHILLLLGLFAIVVAGVMATWLAFAPRGLARRLEQIGGAGAVAAGDGRAPPAVWIEKLAEISQPISKLSLPKSG
WENSPLRLRLINAGWRSPGAAHLYFAAKTVLALALPAAAMPLLIGTAIADSPYSVSAMLVLIGAFGFYLPNAMLARRIAA
RQRMIVEDFPDALDLLTVCVEAGLGLDAALTKVADELRLRSPVVADELGLMLLEMRSGFTKETALRNLALRTGAEDVDAF
STMLIQADRFGTSIGASLRVLSDTLRTQRRMRAEERAAKIALKLLFPLIFCIFPALLTVLLGPAFIHIYRTLLPTMAGG

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34251; Mature: 34251

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLNVMHILLLLGLFAIVVAGVMATWLAFAPRGLARRLEQIGGAGAVAAGDGRAPPAVW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCHHHH
IEKLAEISQPISKLSLPKSGWENSPLRLRLINAGWRSPGAAHLYFAAKTVLALALPAAAM
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
PLLIGTAIADSPYSVSAMLVLIGAFGFYLPNAMLARRIAARQRMIVEDFPDALDLLTVCV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
EAGLGLDAALTKVADELRLRSPVVADELGLMLLEMRSGFTKETALRNLALRTGAEDVDAF
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
STMLIQADRFGTSIGASLRVLSDTLRTQRRMRAEERAAKIALKLLFPLIFCIFPALLTVL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGPAFIHIYRTLLPTMAGG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENLNVMHILLLLGLFAIVVAGVMATWLAFAPRGLARRLEQIGGAGAVAAGDGRAPPAVW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCHHHH
IEKLAEISQPISKLSLPKSGWENSPLRLRLINAGWRSPGAAHLYFAAKTVLALALPAAAM
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
PLLIGTAIADSPYSVSAMLVLIGAFGFYLPNAMLARRIAARQRMIVEDFPDALDLLTVCV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
EAGLGLDAALTKVADELRLRSPVVADELGLMLLEMRSGFTKETALRNLALRTGAEDVDAF
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
STMLIQADRFGTSIGASLRVLSDTLRTQRRMRAEERAAKIALKLLFPLIFCIFPALLTVL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGPAFIHIYRTLLPTMAGG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA