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The map label for this gene is hipB [C]

Identifier: 76819176

GI number: 76819176

Start: 834933

End: 835343

Strand: Direct

Name: hipB [C]

Synonym: BURPS1710b_A0634

Alternate gene names: 76819176

Gene position: 834933-835343 (Clockwise)

Preceding gene: 76819740

Following gene: 76818916

Centisome position: 26.24

GC content: 73.24

Gene sequence:

>411_bases
ATGGCCATCCTCATCGAGCACGAGATCAAGACACTCGGCCAGCTGCGGCCGATTCTGCGCGGCTTCCGCAAATCGGCCGG
ATTGACGCAGGCGATACTCGCGAGCCGCCTCGGCGTCACGCAGCAGACCTACGCGCAGTTCGAGGCGAACCCGGCGTCGG
CGAGCGTCGAGCGGCTGTTCAAGGTGCTGCGCGCGCTCGACATCGAACTCACGCTCACGCTCACGCAGGTCTACGCCGCG
CCCGCGGGCAAGGACAAGGGCGAGGTTGCGAAGACGGCCGCAGGCGCGCGCGCGCGCGCGGGCGCGCGACGTGCCGTGCC
GCCCGCGTCCGCGCCCGCTCCGAGCGCCGCCGGGCGCGCGCCCCGCCCCGCCCGCAAGCGCGCCGCCCCGAAAAAGCGGG
AGGACTGGTGA

Upstream 100 bases:

>100_bases
TCATCCGAAATACAGATTCAACCTTGTAAATTCTATTTACAGTGTATAAACTGTTTTTCTCGCATACAGGCGAAAATTTG
TATTCCAACCAGGTGCGCAC

Downstream 100 bases:

>100_bases
GCGCCCGCCGCGCACGCGCGACGCGCCTGCACCTGTGGATGAACGGCCTGCCCGTCGGCTACTGGGAGCACGCGCGCGAC
GGCGAGCGCCTTGTCTACTT

Product: HipB domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcription Regulator Protein; Transcriptionl Regulator HipB; HipB Domain-Containing Protein; Transcriptional Regulator HipB; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAILIEHEIKTLGQLRPILRGFRKSAGLTQAILASRLGVTQQTYAQFEANPASASVERLFKVLRALDIELTLTLTQVYAA
PAGKDKGEVAKTAAGARARAGARRAVPPASAPAPSAAGRAPRPARKRAAPKKREDW

Sequences:

>Translated_136_residues
MAILIEHEIKTLGQLRPILRGFRKSAGLTQAILASRLGVTQQTYAQFEANPASASVERLFKVLRALDIELTLTLTQVYAA
PAGKDKGEVAKTAAGARARAGARRAVPPASAPAPSAAGRAPRPARKRAAPKKREDW
>Mature_135_residues
AILIEHEIKTLGQLRPILRGFRKSAGLTQAILASRLGVTQQTYAQFEANPASASVERLFKVLRALDIELTLTLTQVYAAP
AGKDKGEVAKTAAGARARAGARRAVPPASAPAPSAAGRAPRPARKRAAPKKREDW

Specific function: Binds To Operator Sites With The Consensus Sequence 5-'Tatccn(8)GGATA-3' And Repress The Hip Operon Promoter. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14491; Mature: 14360

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILIEHEIKTLGQLRPILRGFRKSAGLTQAILASRLGVTQQTYAQFEANPASASVERLF
CEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
KVLRALDIELTLTLTQVYAAPAGKDKGEVAKTAAGARARAGARRAVPPASAPAPSAAGRA
HHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCC
PRPARKRAAPKKREDW
CCCHHHHCCCCCCCCC
>Mature Secondary Structure 
AILIEHEIKTLGQLRPILRGFRKSAGLTQAILASRLGVTQQTYAQFEANPASASVERLF
EEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
KVLRALDIELTLTLTQVYAAPAGKDKGEVAKTAAGARARAGARRAVPPASAPAPSAAGRA
HHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCC
PRPARKRAAPKKREDW
CCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA