Click here to switch to the map view.

The map label for this gene is pcaC [H]

Identifier: 76819074

GI number: 76819074

Start: 1885483

End: 1885869

Strand: Direct

Name: pcaC [H]

Synonym: BURPS1710b_A1557

Alternate gene names: 76819074

Gene position: 1885483-1885869 (Clockwise)

Preceding gene: 76819655

Following gene: 76818192

Centisome position: 59.26

GC content: 64.34

Gene sequence:

>387_bases
ATGAACGACGATCAACGTTACGAAGCGGGCATGAACGTGCGCCGCGCGGTGCTCGGCGATGCGCACGTCGACCGGTCGCT
CGCGAACCGCACCGATCTGACCGATGAATTCCAGCACCTGATCACGCGCTATGCGTGGGGCGAGATCTGGACGCGCGACG
GCTTGCCGCGCCATACGCGCAGCTTGCTGACGATCGCGATGATGGTCGCGCTCAACCGTGGCGAGGAGCTCGCGCTGCAT
CTGCGCGCGGCGAAGAACAACGGCGTGACGCGCGACGAGATCAAGGAAGTGCTGCTGCAGACAGCGATCTACTGTGGCGT
GCCCGCGGCGAATTCGGCGTTTCATCTCGCGCAGCGCATCTTCGGCGAAGAAGACTCGGCGAGCTGA

Upstream 100 bases:

>100_bases
TGTCGAATTCGATTGCGCGCACATCTCGAACATCGAATGTGCGGACGGCTTCAATCGCACGCTGATCGATTTCCTGACGG
CCTGACGCGAGCGCATCGAG

Downstream 100 bases:

>100_bases
CGCCGCGCGGCGCGCAAGAAGCACGCAAGAAGCACGCACGCGACACGAAAACGACACGAAAACGACACACCGCACGGGCG
GCGCGCCGGACGGCCGCCGC

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MNDDQRYEAGMNVRRAVLGDAHVDRSLANRTDLTDEFQHLITRYAWGEIWTRDGLPRHTRSLLTIAMMVALNRGEELALH
LRAAKNNGVTRDEIKEVLLQTAIYCGVPAANSAFHLAQRIFGEEDSAS

Sequences:

>Translated_128_residues
MNDDQRYEAGMNVRRAVLGDAHVDRSLANRTDLTDEFQHLITRYAWGEIWTRDGLPRHTRSLLTIAMMVALNRGEELALH
LRAAKNNGVTRDEIKEVLLQTAIYCGVPAANSAFHLAQRIFGEEDSAS
>Mature_128_residues
MNDDQRYEAGMNVRRAVLGDAHVDRSLANRTDLTDEFQHLITRYAWGEIWTRDGLPRHTRSLLTIAMMVALNRGEELALH
LRAAKNNGVTRDEIKEVLLQTAIYCGVPAANSAFHLAQRIFGEEDSAS

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14420; Mature: 14420

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDQRYEAGMNVRRAVLGDAHVDRSLANRTDLTDEFQHLITRYAWGEIWTRDGLPRHTR
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLLTIAMMVALNRGEELALHLRAAKNNGVTRDEIKEVLLQTAIYCGVPAANSAFHLAQRI
HHHHHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FGEEDSAS
HCCCCCCC
>Mature Secondary Structure
MNDDQRYEAGMNVRRAVLGDAHVDRSLANRTDLTDEFQHLITRYAWGEIWTRDGLPRHTR
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLLTIAMMVALNRGEELALHLRAAKNNGVTRDEIKEVLLQTAIYCGVPAANSAFHLAQRI
HHHHHHHHHHHCCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FGEEDSAS
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]