| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819021
Identifier: 76819021
GI number: 76819021
Start: 883637
End: 884164
Strand: Direct
Name: 76819021
Synonym: BURPS1710b_A0687
Alternate gene names: NA
Gene position: 883637-884164 (Clockwise)
Preceding gene: 76818606
Following gene: 76817412
Centisome position: 27.77
GC content: 77.27
Gene sequence:
>528_bases ATGAGCGGCCGCCAACAGCGCGCGTTCGAGACGCTGCTCGCGCGGCGCGCGCAGCGCGGCGAGCGGCTGCGCGCCGAGCA GCGCGTGCTGCGCGCCGAGCGCGACGCCGCGGCGGCCGAGCTCGCGCAGGGCGAAGCGCACGCGCACGCGAAGCGCGACG CGGCGAACCGGTACGCCGAGCGGGTCGACGCGATGGCGGCCGGCCGCGCGCCGTTCACGATCGGCGATTACGCGGCGTGC CGCCGCTATCGCGACGCGCTGCTCGACGAGCACGCGCTCGCGAGCGCGCAATGCGCGCGGCTGCGCGCGGCGCTGCAGGC GAAAGTCGACCGGCTTGCCGCGACCGCGCGCCGGATCGCGCGCAACGACGCGCAGATCGACGTCGTGCGCGAGCGAATCC GGCGGCTCGCGCGCGCGGCCGAGGCGGCCGCCGAGGACGCGCAGGACGAGGAAATCGAGGAAGGCGTGCTCGCCCGCCGG CTCGCGGCGGCGCGGGCATCGGACGCATCGAACGAGACGCACGCATGA
Upstream 100 bases:
>100_bases CGGTCGCGAAGATCGACCGGATCCGTGCGTTCCTTAACCAGCGCACCGACGAATACTCGCCGCCCGACGCGACGCTCGCC GCGCTGCACGAGCTCGCCCG
Downstream 100 bases:
>100_bases CGACCTACGACATCTTTGCGCTGCAGCACCTGGGCGACGAATTCATCCGCTTCATCGTGCTGCTCGCGCTGTCGAGCGAG CGGCTGCTCGTGCTGATGGC
Product: type III secretion protein HrpB7
Products: NA
Alternate protein names: Type III Secretory Pathway Protein
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAAC RRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARR LAAARASDASNETHA
Sequences:
>Translated_175_residues MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAAC RRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARR LAAARASDASNETHA >Mature_174_residues SGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAERVDAMAAGRAPFTIGDYAACR RYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIARNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRL AAARASDASNETHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19280; Mature: 19149
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVDAMAAGRAPFTIGDYAACRRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRLAAARASDASNETHA HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGRQQRAFETLLARRAQRGERLRAEQRVLRAERDAAAAELAQGEAHAHAKRDAANRYAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVDAMAAGRAPFTIGDYAACRRYRDALLDEHALASAQCARLRAALQAKVDRLAATARRIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNDAQIDVVRERIRRLARAAEAAAEDAQDEEIEEGVLARRLAAARASDASNETHA HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA