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The map label for this gene is ydhM [C]

Identifier: 76818998

GI number: 76818998

Start: 1846122

End: 1846739

Strand: Direct

Name: ydhM [C]

Synonym: BURPS1710b_A1515

Alternate gene names: 76818998

Gene position: 1846122-1846739 (Clockwise)

Preceding gene: 76819568

Following gene: 76818847

Centisome position: 58.02

GC content: 70.55

Gene sequence:

>618_bases
ATGGACACGAAACCTGACCTTGCTCCGGCCGCCGGCGCGCGCGAGCGCTTGCTCGACGCGGCCGAAACGCTGATCTACGC
GGGCGGCATTCATGCGACGGGCGTCGACGCGATCGTCAAGCGCTCGGGCGCCGCGCGCAAGAGTTTCTATGCGCACTTCG
AATCGAAGGAGGCGCTCGTCGCCGCCGCGCTCGAGCGCCGAGACGCGCGCTGGATGGCGTGGTTCGTCGAGGCGACGAAA
AAGCGCGGCAAGACGCCGCGCGCACGGCTCGTCGGGATGTTCGATGTGCTGCGCGAATGGTTCGAGCAAGCGGATTTCCA
CGGTTGCGCGTTCCTGAACGCGGCGGGCGAGATCGAGCGTGCGGACGATCCGATTCGCGTCGTCGTGCGCGAGCACAAGG
CGCGCCTGCTCGCGTTCGTGCGCGAGCAGCTCGATGCGCACGCGGCGCAGGCGGGCGCGGACCGCCGCTTCGTCGCACGG
CTCGCGCGCCAGTGGCTCGTGCTGATCGACGGCGCGATCGGCGTCGCGCTCGTGAGCGGCGACGCATCGGCCGCACGCGA
CGCGCGCGCGGCGGCCGAGTTGCTGCTCGATGCGACGCTGCCGAACCGGTCCAGCTAA

Upstream 100 bases:

>100_bases
ACCGGTTTCATCCGTCCTCCCCTTTTGCCGAATGTGCGCGAAAACGATATCGCATCGATTCGAGGTTGACAAAGGAGAAT
GATCGTTCTACCGTAAACGC

Downstream 100 bases:

>100_bases
AGCCCCGCCTTTTCATTCGACCGAACCGCAGTACCCCGACCTGCCCGCCGCGCTCGGCGAGCCGGGCAGGCCTTTTCACG
TCCTCAATCTGGAGAACACG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Regulatory Protein; TetR Family Regulatory Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Transcriptional Regulatory Protein; Transcription Regulator Protein; TetR-Family Protein Transcriptional Regulator; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDTKPDLAPAAGARERLLDAAETLIYAGGIHATGVDAIVKRSGAARKSFYAHFESKEALVAAALERRDARWMAWFVEATK
KRGKTPRARLVGMFDVLREWFEQADFHGCAFLNAAGEIERADDPIRVVVREHKARLLAFVREQLDAHAAQAGADRRFVAR
LARQWLVLIDGAIGVALVSGDASAARDARAAAELLLDATLPNRSS

Sequences:

>Translated_205_residues
MDTKPDLAPAAGARERLLDAAETLIYAGGIHATGVDAIVKRSGAARKSFYAHFESKEALVAAALERRDARWMAWFVEATK
KRGKTPRARLVGMFDVLREWFEQADFHGCAFLNAAGEIERADDPIRVVVREHKARLLAFVREQLDAHAAQAGADRRFVAR
LARQWLVLIDGAIGVALVSGDASAARDARAAAELLLDATLPNRSS
>Mature_205_residues
MDTKPDLAPAAGARERLLDAAETLIYAGGIHATGVDAIVKRSGAARKSFYAHFESKEALVAAALERRDARWMAWFVEATK
KRGKTPRARLVGMFDVLREWFEQADFHGCAFLNAAGEIERADDPIRVVVREHKARLLAFVREQLDAHAAQAGADRRFVAR
LARQWLVLIDGAIGVALVSGDASAARDARAAAELLLDATLPNRSS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22374; Mature: 22374

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKPDLAPAAGARERLLDAAETLIYAGGIHATGVDAIVKRSGAARKSFYAHFESKEALV
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHH
AAALERRDARWMAWFVEATKKRGKTPRARLVGMFDVLREWFEQADFHGCAFLNAAGEIER
HHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
ADDPIRVVVREHKARLLAFVREQLDAHAAQAGADRRFVARLARQWLVLIDGAIGVALVSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
DASAARDARAAAELLLDATLPNRSS
CCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTKPDLAPAAGARERLLDAAETLIYAGGIHATGVDAIVKRSGAARKSFYAHFESKEALV
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHH
AAALERRDARWMAWFVEATKKRGKTPRARLVGMFDVLREWFEQADFHGCAFLNAAGEIER
HHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
ADDPIRVVVREHKARLLAFVREQLDAHAAQAGADRRFVARLARQWLVLIDGAIGVALVSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
DASAARDARAAAELLLDATLPNRSS
CCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA