| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is yicG [C]
Identifier: 76818959
GI number: 76818959
Start: 2163727
End: 2164335
Strand: Direct
Name: yicG [C]
Synonym: BURPS1710b_A1774
Alternate gene names: 76818959
Gene position: 2163727-2164335 (Clockwise)
Preceding gene: 76817409
Following gene: 76818910
Centisome position: 68.0
GC content: 70.94
Gene sequence:
>609_bases ATGCATACGCTCTACCTGATCGCGATCGTCGCCGAGGCGATGTCGGGCGCGCTGATGGGCATGCAGCGCGGGATGGACCG GTTCGGCCTCGCGCTCGTCGGCGCGGTGACCGCGCTCGGCGGCGGCACGGTGCGCGACGTGCTGCTCGGCCGCTATCCGC TGACCTGGGTCGCGCACCCCGAATACCTGCTGCTGACGCTCGCGGCGGCGACGTTCGCATCGATGACGGCGACGCACGTC GCGCGGCTGAAGTCGCTGTTCACGGCCGTCGACGCGCTCGGGCTCGCGGCGTTCTCGATCATCGGCTGCGATGTCGCGGC GGCCGTGAACGGCAGCCCGGTCGTGATCGTGCTCGCGGGCGCGATCACCGGCGTTTGCGGCGGGATGCTGCGCGACCTGC TCTGCAACGAGATGCCGCTCGTGCTGCGCAAGGAGCTGTACGCGAGCATCGCGCTGCTGACGGGTGGGCTGTATGTCGGC ATGAAGGCGATCGGCGCCGCGCAAGGTTTCGCGACCGTCGTCGCGCTGGCCGTGGGATTCGCGCTCAGGATGCTCGCCGT GCGGCGCGGCTGGCGGCTGAAGGCGTTTCAGGCGGCCGACGCCGGGTGA
Upstream 100 bases:
>100_bases GGCAGGGGCGGCGGGTGCGCCGACGCCGGCCGCCGTCGACGCGGCCGAGCGCGCGCGCGTGCTCGAGCTGTTTCGCACCG AAGACTGAGCGGGGACGGCC
Downstream 100 bases:
>100_bases CACGTCGCCGCGGGCGCGGCGGCCGCTCATGTGCCGCTCGCGCGTCGTTCACGCGGGCACGATGACGGGCGCGACGCCGT CGCCCGCGTCGACGAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MHTLYLIAIVAEAMSGALMGMQRGMDRFGLALVGAVTALGGGTVRDVLLGRYPLTWVAHPEYLLLTLAAATFASMTATHV ARLKSLFTAVDALGLAAFSIIGCDVAAAVNGSPVVIVLAGAITGVCGGMLRDLLCNEMPLVLRKELYASIALLTGGLYVG MKAIGAAQGFATVVALAVGFALRMLAVRRGWRLKAFQAADAG
Sequences:
>Translated_202_residues MHTLYLIAIVAEAMSGALMGMQRGMDRFGLALVGAVTALGGGTVRDVLLGRYPLTWVAHPEYLLLTLAAATFASMTATHV ARLKSLFTAVDALGLAAFSIIGCDVAAAVNGSPVVIVLAGAITGVCGGMLRDLLCNEMPLVLRKELYASIALLTGGLYVG MKAIGAAQGFATVVALAVGFALRMLAVRRGWRLKAFQAADAG >Mature_202_residues MHTLYLIAIVAEAMSGALMGMQRGMDRFGLALVGAVTALGGGTVRDVLLGRYPLTWVAHPEYLLLTLAAATFASMTATHV ARLKSLFTAVDALGLAAFSIIGCDVAAAVNGSPVVIVLAGAITGVCGGMLRDLLCNEMPLVLRKELYASIALLTGGLYVG MKAIGAAQGFATVVALAVGFALRMLAVRRGWRLKAFQAADAG
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=180, Percent_Identity=43.8888888888889, Blast_Score=164, Evalue=4e-42, Organism=Escherichia coli, GI1786352, Length=192, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 20839; Mature: 20839
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLYLIAIVAEAMSGALMGMQRGMDRFGLALVGAVTALGGGTVRDVLLGRYPLTWVAHP CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCC EYLLLTLAAATFASMTATHVARLKSLFTAVDALGLAAFSIIGCDVAAAVNGSPVVIVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH AITGVCGGMLRDLLCNEMPLVLRKELYASIALLTGGLYVGMKAIGAAQGFATVVALAVGF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRMLAVRRGWRLKAFQAADAG HHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure MHTLYLIAIVAEAMSGALMGMQRGMDRFGLALVGAVTALGGGTVRDVLLGRYPLTWVAHP CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCC EYLLLTLAAATFASMTATHVARLKSLFTAVDALGLAAFSIIGCDVAAAVNGSPVVIVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH AITGVCGGMLRDLLCNEMPLVLRKELYASIALLTGGLYVGMKAIGAAQGFATVVALAVGF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRMLAVRRGWRLKAFQAADAG HHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]