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The map label for this gene is shiA [H]

Identifier: 76818932

GI number: 76818932

Start: 196714

End: 196971

Strand: Direct

Name: shiA [H]

Synonym: BURPS1710b_A0149

Alternate gene names: 76818932

Gene position: 196714-196971 (Clockwise)

Preceding gene: 76818841

Following gene: 76819710

Centisome position: 6.18

GC content: 64.73

Gene sequence:

>258_bases
ATGCGCGCGAGCACGGACGGAGCGCAGGCCTTCGTCGAGCAGGTCGAGCACGGCCGCCGCCGGCTGAAGCTGCCGGTGCG
CGAGGCGCTCACCCGTCATCCGAAGGCGTTCGTCTACATCGTCGCGCTGTGTCTCGCCGAACCATTCACGATGTACGTCG
TCACCGCGTTCGCGCTCAGCTATTCGACGTCGAACCTCGGGATGTCGCGCGATCTGTTCCTGAACATCGGGCTGCTCGCC
GGCCGTAGACCAAAATAA

Upstream 100 bases:

>100_bases
CGCAGATTGCCCTCGCCGAAACCGCGATGCCCCTGCCGCTGGACGATCTCGAAGAAGATCTCGCCTGGCCGGCGCTTGAC
GCGCGCCGATCGGCCTGCGG

Downstream 100 bases:

>100_bases
ACTTGTCACCGTTTGCGAAGCAAAGATGTCACTCCGCAGGTCACCGTGGACCAAATGATGCGAAATTCTCGGGAATTCAT
GAGGTTGCACATCGCGAAAT

Product: shikimate transporter

Products: Proton [Cytoplasm]; shikimate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRASTDGAQAFVEQVEHGRRRLKLPVREALTRHPKAFVYIVALCLAEPFTMYVVTAFALSYSTSNLGMSRDLFLNIGLLA
GRRPK

Sequences:

>Translated_85_residues
MRASTDGAQAFVEQVEHGRRRLKLPVREALTRHPKAFVYIVALCLAEPFTMYVVTAFALSYSTSNLGMSRDLFLNIGLLA
GRRPK
>Mature_85_residues
MRASTDGAQAFVEQVEHGRRRLKLPVREALTRHPKAFVYIVALCLAEPFTMYVVTAFALSYSTSNLGMSRDLFLNIGLLA
GRRPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788292, Length=71, Percent_Identity=60.5633802816901, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR005829 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 9526; Mature: 9526

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASTDGAQAFVEQVEHGRRRLKLPVREALTRHPKAFVYIVALCLAEPFTMYVVTAFALS
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
YSTSNLGMSRDLFLNIGLLAGRRPK
HCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRASTDGAQAFVEQVEHGRRRLKLPVREALTRHPKAFVYIVALCLAEPFTMYVVTAFALS
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHH
YSTSNLGMSRDLFLNIGLLAGRRPK
HCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; shikimate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + shikimate [Periplasm] = Proton [Cytoplasm] + shikimate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9524262; 9097040; 9278503 [H]