| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is benB [H]
Identifier: 76818735
GI number: 76818735
Start: 1264168
End: 1266261
Strand: Direct
Name: benB [H]
Synonym: BURPS1710b_A1000
Alternate gene names: 76818735
Gene position: 1264168-1266261 (Clockwise)
Preceding gene: 76818281
Following gene: 76818275
Centisome position: 39.73
GC content: 65.38
Gene sequence:
>2094_bases ATGCCGCAGTTCCATCTTCATACCTCGAGGATATCGATCCGATACTCAATCAGTGTTGGACGCACCGTTTTGCCGGCAAC TATCCTCAATCTGACCGCGCTGTCGTCGAGCACTATACCTGCGAAGCATCGCAGGTTCACCCGGGGTTTCCCATGCGACG CGCGGCGCGGCGCCTCGCCGGACCGCGCGTCCGCACGCGCGCCGCCCCCGATCAGAGAGCCCATCAGGAGACGCCCCCAT GATCCCGATCGACCCGGACCGCCGTGCGACGCCGCGCCCCATCGACGATTTCCTCGTCGAAGACAAGGCGCGCGGCGACT ACCGGCTGCACCGCAGCGCGTTCACCGACGAAATGCTGTTCGAGCTCGAGATGAAGCACATCTTCGAAGGCAACTGGATC TATCTCGCGCACGAGAGCCAGCTCCCGAACGCGAACGATTACTACACGACCACGATCGGCCGCCAGCCGATCGTGATCGC GCGCAACCGCCACGGCGAGCTGAACGCGTTCGTCAACGCCTGCACGCACCGCGGCGCGATGCTGTGCCGCCACAAGCGCG GCAACCGCGCGAGCTACACGTGCCCGTTCCACGGCTGGACGTTCAGCAACGGCGGCAAGCTGCTCAAAGTGAAGGACCCC GAAGGAGCCGGCTACCCGGACTGCTTCAACCGCGACGGCTCGCACGATCTGAAGAAAGTCGCGCGCTTCGAGAACTATCG CGGCTTCCTGTTCGGCAGCCTGAACCCCGAAGTCGAGCCGCTCGCCGCGCATCTCGGCGATGCCGCGCGCATCATCGACA TGATCGTCGATCAGTCGGCGGACGGCCTCGAGGTGCTGCGCGGCTCGTCGACGTACACGTACGAAGGCAACTGGAAGCTC ACCGCCGAGAACGGCGCGGACGGCTACCACGTATCGGCCGTTCACTGGAACTACGCGGCGACCGTCAACCACCGCAAGAC CGACGCGCAGCACGAAGACACGATCCGCGCGATGGACGCGGGCAACTGGGGCCGTCAGGGCGGCGGCTTCTACGCGTTCG ATCACGGCCACATGCTGCTGTGGACGCGCTGGGCGAACCCGGAGGACCGGCCGAACTTCGATCGCCGCGACGAATTCGCC GCGCGCTGCGGCGGCGACGTCGCCGACTGGATGATCCGGAACTCCCGCAACCTGTGCCTGTACCCGAACGTCTATCTGAT GGACCAGTTCGGCTCGCAGATCCGCGTGCTGCGCCCGCTCGCCGTCGATCGCACCGAGGTCACGATCTACTGCATCGCGC CGAAGGGCGAGGCGCCCGACGCGCGCGCGCGGCGCATCCGCCAGTACGAGGATTTCTTCAACGCGAGCGGAATGGCGACG CCCGACGATCTCGAGGAATTCCGCGCGTGCCAGCAGGGCTACGCGGGCCGCGCGGTCGAATGGAACGACATGTGCCGCGG CGCCTCGCACTGGATCGAGGGCCCCGACGAAGCCGCGCGCCGGATCGGCATCCGCCCGCTGATGAGCGGCGTGAAGACCG AGGACGAAGGGCTGTACACGGTCCAGCACCGCTACTGGATCGCGACGATGAAGCAGGCGCTCGCCGCCGAAAGGAGCGGC GCATGAAGACGATCGATCTCGCCGACATCCAGGCGTTCCTCTATCGCGAGAGCCGGCTGCTCGACGACAAGGCGTGGGAC GCATGGCTCGACTGCTATCGCGCGGACGCCGTGTTCTGGATGCCTTCCTGGGACGACGCGGATGCGCTCGTCACCGATCC GCAGCGCGAAATCTCGCTGATCTACTACCCGAACCGGCAGGGGCTCGAGGATCGCGTGTTCCGCATCAAGACCGAGCGCT CGAGCGCGACGGTGCCCGATACGCGCACGAGCCACAACATCGCGAACGTCGAGCGCGAAAGCGCCGATGGCGACGTGCAC ACCGTGCGCTTCAACTGGCACACGCTCAGCTATCGCTACAAGACGGTGTCGAGCTATTTCGGCATGTCGCGCTACGCGAT CGATTTCTCCGGCGACGCGCCGAAGATCGTCAGCAAGTACGTCGTCCTGAAGAACGACTACATCAACCAGCTGATCGACA TCTACCACATCTAG
Upstream 100 bases:
>100_bases GCTGCTGGATCTGGCGGCTCAACGGCGGCTGCGCGATGTGCAGGCGCTCGGCCGCGCGCGTGAAGTTCTGCTCCTCCGCG ACCGCGACGAAGTAGCGTAG
Downstream 100 bases:
>100_bases CCGGTGCGCGCCGCGGCAGCGCGGCCCGCTCGAGGAACGCATCATGGAACACCGCATCGCCCTGCAGTTCGAAGACGGCG TCACCCGCTTCATCGCCTGC
Product: benzoate 1,2-dioxygenase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MPQFHLHTSRISIRYSISVGRTVLPATILNLTALSSSTIPAKHRRFTRGFPCDARRGASPDRASARAPPPIREPIRRRPH DPDRPGPPCDAAPHRRFPRRRQGARRLPAAPQRVHRRNAVRARDEAHLRRQLDLSRAREPAPERERLLHDHDRPPADRDR AQPPRRAERVRQRLHAPRRDAVPPQARQPRELHVPVPRLDVQQRRQAAQSEGPRRSRLPGLLQPRRLARSEESRALRELS RLPVRQPEPRSRAARRASRRCRAHHRHDRRSVGGRPRGAARLVDVHVRRQLEAHRRERRGRLPRIGRSLELRGDRQPPQD RRAARRHDPRDGRGQLGPSGRRLLRVRSRPHAAVDALGEPGGPAELRSPRRIRRALRRRRRRLDDPELPQPVPVPERLSD GPVRLADPRAAPARRRSHRGHDLLHRAEGRGARRARAAHPPVRGFLQRERNGDARRSRGIPRVPAGLRGPRGRMERHVPR RLALDRGPRRSRAPDRHPPADERREDRGRRAVHGPAPLLDRDDEAGARRRKERRMKTIDLADIQAFLYRESRLLDDKAWD AWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVH TVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI
Sequences:
>Translated_697_residues MPQFHLHTSRISIRYSISVGRTVLPATILNLTALSSSTIPAKHRRFTRGFPCDARRGASPDRASARAPPPIREPIRRRPH DPDRPGPPCDAAPHRRFPRRRQGARRLPAAPQRVHRRNAVRARDEAHLRRQLDLSRAREPAPERERLLHDHDRPPADRDR AQPPRRAERVRQRLHAPRRDAVPPQARQPRELHVPVPRLDVQQRRQAAQSEGPRRSRLPGLLQPRRLARSEESRALRELS RLPVRQPEPRSRAARRASRRCRAHHRHDRRSVGGRPRGAARLVDVHVRRQLEAHRRERRGRLPRIGRSLELRGDRQPPQD RRAARRHDPRDGRGQLGPSGRRLLRVRSRPHAAVDALGEPGGPAELRSPRRIRRALRRRRRRLDDPELPQPVPVPERLSD GPVRLADPRAAPARRRSHRGHDLLHRAEGRGARRARAAHPPVRGFLQRERNGDARRSRGIPRVPAGLRGPRGRMERHVPR RLALDRGPRRSRAPDRHPPADERREDRGRRAVHGPAPLLDRDDEAGARRRKERRMKTIDLADIQAFLYRESRLLDDKAWD AWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVH TVRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI >Mature_696_residues PQFHLHTSRISIRYSISVGRTVLPATILNLTALSSSTIPAKHRRFTRGFPCDARRGASPDRASARAPPPIREPIRRRPHD PDRPGPPCDAAPHRRFPRRRQGARRLPAAPQRVHRRNAVRARDEAHLRRQLDLSRAREPAPERERLLHDHDRPPADRDRA QPPRRAERVRQRLHAPRRDAVPPQARQPRELHVPVPRLDVQQRRQAAQSEGPRRSRLPGLLQPRRLARSEESRALRELSR LPVRQPEPRSRAARRASRRCRAHHRHDRRSVGGRPRGAARLVDVHVRRQLEAHRRERRGRLPRIGRSLELRGDRQPPQDR RAARRHDPRDGRGQLGPSGRRLLRVRSRPHAAVDALGEPGGPAELRSPRRIRRALRRRRRRLDDPELPQPVPVPERLSDG PVRLADPRAAPARRRSHRGHDLLHRAEGRGARRARAAHPPVRGFLQRERNGDARRSRGIPRVPAGLRGPRGRMERHVPRR LALDRGPRRSRAPDRHPPADERREDRGRRAVHGPAPLLDRDDEAGARRRKERRMKTIDLADIQAFLYRESRLLDDKAWDA WLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVHT VRFNWHTLSYRYKTVSSYFGMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI
Specific function: Degradation of benzoate to 2-hydro-1,2-dihydroxybenzoate (DHB). The beta subunit may be responsible for the substrate specificity of the enzyme [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017641 - InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.10 [H]
Molecular weight: Translated: 80871; Mature: 80740
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQFHLHTSRISIRYSISVGRTVLPATILNLTALSSSTIPAKHRRFTRGFPCDARRGASP CCCCEEEECEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC DRASARAPPPIREPIRRRPHDPDRPGPPCDAAPHRRFPRRRQGARRLPAAPQRVHRRNAV CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHH RARDEAHLRRQLDLSRAREPAPERERLLHDHDRPPADRDRAQPPRRAERVRQRLHAPRRD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC AVPPQARQPRELHVPVPRLDVQQRRQAAQSEGPRRSRLPGLLQPRRLARSEESRALRELS CCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHH RLPVRQPEPRSRAARRASRRCRAHHRHDRRSVGGRPRGAARLVDVHVRRQLEAHRRERRG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC RLPRIGRSLELRGDRQPPQDRRAARRHDPRDGRGQLGPSGRRLLRVRSRPHAAVDALGEP CCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCC GGPAELRSPRRIRRALRRRRRRLDDPELPQPVPVPERLSDGPVRLADPRAAPARRRSHRG CCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCEEECCCCCCHHHHHHCCC HDLLHRAEGRGARRARAAHPPVRGFLQRERNGDARRSRGIPRVPAGLRGPRGRMERHVPR HHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH RLALDRGPRRSRAPDRHPPADERREDRGRRAVHGPAPLLDRDDEAGARRRKERRMKTIDL HHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH ADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEECCCCCCEEEEECCCCC GLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYF CCHHHHEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEEHHHHHHHHH GMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQFHLHTSRISIRYSISVGRTVLPATILNLTALSSSTIPAKHRRFTRGFPCDARRGASP CCCEEEECEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC DRASARAPPPIREPIRRRPHDPDRPGPPCDAAPHRRFPRRRQGARRLPAAPQRVHRRNAV CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHH RARDEAHLRRQLDLSRAREPAPERERLLHDHDRPPADRDRAQPPRRAERVRQRLHAPRRD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC AVPPQARQPRELHVPVPRLDVQQRRQAAQSEGPRRSRLPGLLQPRRLARSEESRALRELS CCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHH RLPVRQPEPRSRAARRASRRCRAHHRHDRRSVGGRPRGAARLVDVHVRRQLEAHRRERRG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC RLPRIGRSLELRGDRQPPQDRRAARRHDPRDGRGQLGPSGRRLLRVRSRPHAAVDALGEP CCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCC GGPAELRSPRRIRRALRRRRRRLDDPELPQPVPVPERLSDGPVRLADPRAAPARRRSHRG CCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCEEECCCCCCHHHHHHCCC HDLLHRAEGRGARRARAAHPPVRGFLQRERNGDARRSRGIPRVPAGLRGPRGRMERHVPR HHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH RLALDRGPRRSRAPDRHPPADERREDRGRRAVHGPAPLLDRDDEAGARRRKERRMKTIDL HHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH ADIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEECCCCCCEEEEECCCCC GLEDRVFRIKTERSSATVPDTRTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSSYF CCHHHHEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEEHHHHHHHHH GMSRYAIDFSGDAPKIVSKYVVLKNDYINQLIDIYHI CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1885518 [H]