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The map label for this gene is rfaF [C]

Identifier: 76818700

GI number: 76818700

Start: 2407369

End: 2408625

Strand: Direct

Name: rfaF [C]

Synonym: BURPS1710b_A1967

Alternate gene names: 76818700

Gene position: 2407369-2408625 (Clockwise)

Preceding gene: 76817568

Following gene: 76819408

Centisome position: 75.66

GC content: 60.86

Gene sequence:

>1257_bases
ATGGCCGATGAGCGCGCGGCGAAGCGATGGCCCGCGCGCGGCGAAGACATGAAAATACTGTTCATCAAGCTCTCCGCATT
GGGCGACGTGCTGGCCAGCACGCCGCTGTTCGCGTCGACCAAGGCCGAGCATCCGGACTGGTTCGTCGGGCACGTGGTGG
CGCGTCCCTATGCGGCTGCGACGCGAAACAATGCGCACGTCGATGCGCAATTCATTGTCGATTCGCCGCTGTCCGGTGGC
GCGATTCGGAAAATCAGGGTGGCGGCGCAAATATGGCGGTACATGATGCGCGAACGATACGACATCGCGGTTGTGCTGCA
TCGGAGTTTTGTACTACAACTGATATGTCGCCTCGCATCGGTCAGGAAAACCATCGGCTATGAAAGCCGATTTTCATTCA
TATTGAGCCACTCCATTCCGTTTTCGATGCAGGGAAATCGAAGCGGGCTGGAATTGCGTTTGCTGAAGTCGGCGGGAATC
ATCCACGACGAAAAGAAGAAATTGAGGTTCGACATCGATTTCGGGAACGTGGACCGAAACCGGCTGCGCGCGTTGCCCGC
CGCGTTCATCGCCGTCAACGCGGGCGGCGGCAACGCGGATGCGCAGGCAGCCAACAAGCTGTGGCCCGCCGAGCGTTACG
GTGCATTGATCAAGCGGTTGCCGTTGCCGGTCGTGATGCTCGGACACGGCGCGGCGGATGAAGACATCAGGGATCGGGTC
GCGGCGACGGGGGCGAGGTTCGTCGACATGGTCGGCAAGACGAATCTCGACGAGACGGCGGTCATCCTCGAACGCTCGCG
TCTGTATGTGGGCAACGACAGCGCGCTTTTGTATCTCGCGGCATCGCTCGGCGTGACGACGATCGGGATCTACGGGCCTA
CCGATCCCGCCGCGTTCAGTCCGTTGGGCGCGAACAATCTGTGGCTGAGTGGCAAGACGTCCTGTGCACCGTGTTATTCG
TCGTTCGACGGGATCGGCGGGCGCATGTACACGTGCACGAACAACATTTGCATGCAGGCCGTTACGGTCGAATCCGTCAG
CGAGAGAATCCATGCAGCCCTCCATCAAGATCAGAATCTACAAGCGGCTGGACCGGATGTTGTCGGATCTGGTCAGGGCC
GTGCCGCATCCGAAACGCGCGCTCGGGCGGACACCGACGCGCGTGCTGATCATCAAGCTCTCGGCGATGGGGGATTCGCT
GTGCCTCTTTCCCACCGTTCGGCAACTGGCGCTCGCGTTCCCGGGCGCGACGATTGA

Upstream 100 bases:

>100_bases
CTGAATTGTAAAGCATCCCTATTCGAATTTAATGGAAGATATCATTTTCAGCGAATAGAAATTCTGCCCGAGTCATTTTC
TTTAAACGAGCAATGGGCGA

Downstream 100 bases:

>100_bases
CTGGCTGACGTCCAATCGCTCCAATCCCGCGCTGTTCGCCGAGCTGCCGTTCATCCGCACGATCTTCGTCACGCCGCCGT
CGCTCGTGCGCGCGCTGACG

Product: putative heptosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; ADP-HeptoseLPS Heptosyltransferase II; Lipopolysaccharide Heptosyltransferase I; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase III; Heptosyltransferase Family; ADP-Heptose; LPS Heptosyltransferase II; Heptosyltransferase; Lipopolysaccharide Heptosyltransferase; ADP-Heptose-LPS Heptosyltransferase II; Heptosyltransferase Superfamily

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MADERAAKRWPARGEDMKILFIKLSALGDVLASTPLFASTKAEHPDWFVGHVVARPYAAATRNNAHVDAQFIVDSPLSGG
AIRKIRVAAQIWRYMMRERYDIAVVLHRSFVLQLICRLASVRKTIGYESRFSFILSHSIPFSMQGNRSGLELRLLKSAGI
IHDEKKKLRFDIDFGNVDRNRLRALPAAFIAVNAGGGNADAQAANKLWPAERYGALIKRLPLPVVMLGHGAADEDIRDRV
AATGARFVDMVGKTNLDETAVILERSRLYVGNDSALLYLAASLGVTTIGIYGPTDPAAFSPLGANNLWLSGKTSCAPCYS
SFDGIGGRMYTCTNNICMQAVTVESVSERIHAALHQDQNLQAAGPDVVGSGQGRAASETRARADTDARADHQALGDGGFA
VPLSHRSATGARVPGRDD

Sequences:

>Translated_418_residues
MADERAAKRWPARGEDMKILFIKLSALGDVLASTPLFASTKAEHPDWFVGHVVARPYAAATRNNAHVDAQFIVDSPLSGG
AIRKIRVAAQIWRYMMRERYDIAVVLHRSFVLQLICRLASVRKTIGYESRFSFILSHSIPFSMQGNRSGLELRLLKSAGI
IHDEKKKLRFDIDFGNVDRNRLRALPAAFIAVNAGGGNADAQAANKLWPAERYGALIKRLPLPVVMLGHGAADEDIRDRV
AATGARFVDMVGKTNLDETAVILERSRLYVGNDSALLYLAASLGVTTIGIYGPTDPAAFSPLGANNLWLSGKTSCAPCYS
SFDGIGGRMYTCTNNICMQAVTVESVSERIHAALHQDQNLQAAGPDVVGSGQGRAASETRARADTDARADHQALGDGGFA
VPLSHRSATGARVPGRDD
>Mature_417_residues
ADERAAKRWPARGEDMKILFIKLSALGDVLASTPLFASTKAEHPDWFVGHVVARPYAAATRNNAHVDAQFIVDSPLSGGA
IRKIRVAAQIWRYMMRERYDIAVVLHRSFVLQLICRLASVRKTIGYESRFSFILSHSIPFSMQGNRSGLELRLLKSAGII
HDEKKKLRFDIDFGNVDRNRLRALPAAFIAVNAGGGNADAQAANKLWPAERYGALIKRLPLPVVMLGHGAADEDIRDRVA
ATGARFVDMVGKTNLDETAVILERSRLYVGNDSALLYLAASLGVTTIGIYGPTDPAAFSPLGANNLWLSGKTSCAPCYSS
FDGIGGRMYTCTNNICMQAVTVESVSERIHAALHQDQNLQAAGPDVVGSGQGRAASETRARADTDARADHQALGDGGFAV
PLSHRSATGARVPGRDD

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 45183; Mature: 45052

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADERAAKRWPARGEDMKILFIKLSALGDVLASTPLFASTKAEHPDWFVGHVVARPYAAA
CCCCHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHH
TRNNAHVDAQFIVDSPLSGGAIRKIRVAAQIWRYMMRERYDIAVVLHRSFVLQLICRLAS
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
VRKTIGYESRFSFILSHSIPFSMQGNRSGLELRLLKSAGIIHDEKKKLRFDIDFGNVDRN
HHHHHCCCHHHHEEEECCCCCEECCCCCCCEEEEECCCCCEECCCCEEEEEEECCCCCHH
RLRALPAAFIAVNAGGGNADAQAANKLWPAERYGALIKRLPLPVVMLGHGAADEDIRDRV
HHHHCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
AATGARFVDMVGKTNLDETAVILERSRLYVGNDSALLYLAASLGVTTIGIYGPTDPAAFS
HHHHHHHHHHHCCCCCCHHHEEEECCEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCC
PLGANNLWLSGKTSCAPCYSSFDGIGGRMYTCTNNICMQAVTVESVSERIHAALHQDQNL
CCCCCCEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
QAAGPDVVGSGQGRAASETRARADTDARADHQALGDGGFAVPLSHRSATGARVPGRDD
CCCCCCCEECCCCCCCHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADERAAKRWPARGEDMKILFIKLSALGDVLASTPLFASTKAEHPDWFVGHVVARPYAAA
CCCHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHH
TRNNAHVDAQFIVDSPLSGGAIRKIRVAAQIWRYMMRERYDIAVVLHRSFVLQLICRLAS
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
VRKTIGYESRFSFILSHSIPFSMQGNRSGLELRLLKSAGIIHDEKKKLRFDIDFGNVDRN
HHHHHCCCHHHHEEEECCCCCEECCCCCCCEEEEECCCCCEECCCCEEEEEEECCCCCHH
RLRALPAAFIAVNAGGGNADAQAANKLWPAERYGALIKRLPLPVVMLGHGAADEDIRDRV
HHHHCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
AATGARFVDMVGKTNLDETAVILERSRLYVGNDSALLYLAASLGVTTIGIYGPTDPAAFS
HHHHHHHHHHHCCCCCCHHHEEEECCEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCC
PLGANNLWLSGKTSCAPCYSSFDGIGGRMYTCTNNICMQAVTVESVSERIHAALHQDQNL
CCCCCCEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
QAAGPDVVGSGQGRAASETRARADTDARADHQALGDGGFAVPLSHRSATGARVPGRDD
CCCCCCCEECCCCCCCHHHHHHCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA