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The map label for this gene is yngJ [H]

Identifier: 76818683

GI number: 76818683

Start: 1434591

End: 1435742

Strand: Direct

Name: yngJ [H]

Synonym: BURPS1710b_A1150

Alternate gene names: 76818683

Gene position: 1434591-1435742 (Clockwise)

Preceding gene: 76818723

Following gene: 76817519

Centisome position: 45.09

GC content: 66.49

Gene sequence:

>1152_bases
ATGCAATTCACCGAGGAACACGAAGCGATTTCGCGCACCGTCAAGCGCTTCATCGAGCAGGAGGTCAACCCGCACGTCGA
CGAATGGGAGGAAGCCGGCATCTTTCCCGCGCACGAGGTGTTCGGCAAGCTCGGCGCGCTCGGCATGCTCGGCCTGAGCA
AGCCGGCCGCGTACGGCGGCGGCGGCCTCGACTACAGCTACGAGCTCGTGATGGCCGAGGCGCTCGGCGTGTGCGCGGCG
GGCGGCGTGCCGCTCGCGATCGGCGTGCAGACGAACATGGCGACGCCCGCGCTCGCGCGCTTCGGCTCCGACGCGCTGCG
CGACGAATTCCTCGCGCCCGCGATCGCGGGCAGGCAAGTATCGTGCATCGGCGTATCGGAGCCGGGCGCGGGCTCCGATG
TTGCGTCGATCCGCACGAGCGCGCGCCGCGACGGCGACGACTACGTGATCAGCGGCACGAAGCTCTGGATCACGAACGGC
ACGCAGGCCGACTGGATGTGCTGCCTGGCGAATACGTCGGACGGCCCGCCGCACCGGAACAAATCGTTGATCGTCGTGCC
GCTGAAATCGAAGGGCGTGCACATCGAAAAGAAGATCCGCAAGATCGGCATGCACTCGTCGGACACCGCGCAGATCTTCT
TCGACGACGTACGCGTGCCGCGCCGCAACCTGATCGGCGAAGAAGGCCAGGGCTTCACATACCAGATGCTGCAATTCCAG
GAGGAGCGGCTCTACGGCGCGGCGGCCGCGCTCGTCGTGCTCGATCGCTCGATCGACGAGACGATCGATTACACGCGCGC
GCGCAAAATCTTCGGGCGGCCGGTGCTCGATCACCAGATCGTGCACTATCGGCTCGCCGAGTTGAAGACCGAGGTCGAGG
CGCTGCGCGCGCTCACATATCGCGCCACCGAGCTGTACGTGCAGGGCGGTGACGTGACGACGCTCGCGTCGATGGCGAAA
CTGAAGGCGGGACGCCTCGCGCGCGAAGTCACCGACAGTTGCCTGCAGTTCTGGGGCGGCATGGGCTTCGCATGGGAATC
GAGCATCTCGCGCACCTACCGCGACACGCGGCTCTTCTCGATCGGCGGCGGCGCGGACGAAGTGATGCTCGGCATCATCT
GCAAGAAGCTCGGCACGCTGCCGCGGGAGTGA

Upstream 100 bases:

>100_bases
CCGCGTGCTCGCGATCACGCTCGCCGTCTGCCGCGACGGCCGCCGCAAATCCCTGCAGCCGCTCACGTTCGGCGTCGCCC
GCCCCTGATCTGGAGACATC

Downstream 100 bases:

>100_bases
CGCGCGATGACCGGGACGACTTTCTCGACGCCCGCGCCGCTGCATGTCGCGCAAGCCGACGGCGTGCGGTTCGCGACGCT
GAACCGGCCGGCCAGGCGCA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MQFTEEHEAISRTVKRFIEQEVNPHVDEWEEAGIFPAHEVFGKLGALGMLGLSKPAAYGGGGLDYSYELVMAEALGVCAA
GGVPLAIGVQTNMATPALARFGSDALRDEFLAPAIAGRQVSCIGVSEPGAGSDVASIRTSARRDGDDYVISGTKLWITNG
TQADWMCCLANTSDGPPHRNKSLIVVPLKSKGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQ
EERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALRALTYRATELYVQGGDVTTLASMAK
LKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGGGADEVMLGIICKKLGTLPRE

Sequences:

>Translated_383_residues
MQFTEEHEAISRTVKRFIEQEVNPHVDEWEEAGIFPAHEVFGKLGALGMLGLSKPAAYGGGGLDYSYELVMAEALGVCAA
GGVPLAIGVQTNMATPALARFGSDALRDEFLAPAIAGRQVSCIGVSEPGAGSDVASIRTSARRDGDDYVISGTKLWITNG
TQADWMCCLANTSDGPPHRNKSLIVVPLKSKGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQ
EERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALRALTYRATELYVQGGDVTTLASMAK
LKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGGGADEVMLGIICKKLGTLPRE
>Mature_383_residues
MQFTEEHEAISRTVKRFIEQEVNPHVDEWEEAGIFPAHEVFGKLGALGMLGLSKPAAYGGGGLDYSYELVMAEALGVCAA
GGVPLAIGVQTNMATPALARFGSDALRDEFLAPAIAGRQVSCIGVSEPGAGSDVASIRTSARRDGDDYVISGTKLWITNG
TQADWMCCLANTSDGPPHRNKSLIVVPLKSKGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQ
EERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALRALTYRATELYVQGGDVTTLASMAK
LKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFSIGGGADEVMLGIICKKLGTLPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=379, Percent_Identity=35.6200527704486, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI4557233, Length=378, Percent_Identity=32.8042328042328, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI226958412, Length=369, Percent_Identity=30.3523035230352, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI4557231, Length=384, Percent_Identity=31.25, Blast_Score=191, Evalue=7e-49,
Organism=Homo sapiens, GI187960098, Length=384, Percent_Identity=31.25, Blast_Score=191, Evalue=7e-49,
Organism=Homo sapiens, GI226958414, Length=333, Percent_Identity=31.5315315315315, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=29.3333333333333, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI7656849, Length=379, Percent_Identity=31.1345646437995, Blast_Score=178, Evalue=7e-45,
Organism=Homo sapiens, GI76496475, Length=377, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI4557235, Length=377, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI21361497, Length=364, Percent_Identity=26.6483516483516, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI38505218, Length=397, Percent_Identity=27.455919395466, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI211971008, Length=392, Percent_Identity=25.2551020408163, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI48976061, Length=392, Percent_Identity=25.2551020408163, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI7669494, Length=305, Percent_Identity=26.5573770491803, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4503943, Length=305, Percent_Identity=26.5573770491803, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI87081958, Length=378, Percent_Identity=28.5714285714286, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1786223, Length=372, Percent_Identity=25.5376344086022, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87082384, Length=259, Percent_Identity=24.3243243243243, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=376, Percent_Identity=53.4574468085106, Blast_Score=412, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI17505929, Length=376, Percent_Identity=52.9255319148936, Blast_Score=403, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17508101, Length=374, Percent_Identity=30.4812834224599, Blast_Score=207, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI17570075, Length=380, Percent_Identity=32.1052631578947, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17538396, Length=376, Percent_Identity=29.5212765957447, Blast_Score=191, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=29.2553191489362, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=30.5263157894737, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17569725, Length=384, Percent_Identity=29.9479166666667, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=29.6, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71990804, Length=277, Percent_Identity=32.4909747292419, Blast_Score=158, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71985184, Length=356, Percent_Identity=30.0561797752809, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=28.8793103448276, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71985192, Length=286, Percent_Identity=28.6713286713287, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71982178, Length=277, Percent_Identity=27.7978339350181, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17534353, Length=353, Percent_Identity=25.4957507082153, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17531909, Length=240, Percent_Identity=29.1666666666667, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=290, Percent_Identity=28.2758620689655, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17531913, Length=175, Percent_Identity=29.7142857142857, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=32.5268817204301, Blast_Score=225, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24646207, Length=374, Percent_Identity=32.0855614973262, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=30.3191489361702, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=31.9261213720317, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=29.6791443850267, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI281363737, Length=333, Percent_Identity=27.9279279279279, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI19920834, Length=294, Percent_Identity=29.5918367346939, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41838; Mature: 41838

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTEEHEAISRTVKRFIEQEVNPHVDEWEEAGIFPAHEVFGKLGALGMLGLSKPAAYGG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
GGLDYSYELVMAEALGVCAAGGVPLAIGVQTNMATPALARFGSDALRDEFLAPAIAGRQV
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCEE
SCIGVSEPGAGSDVASIRTSARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRN
EEEECCCCCCCCHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCEEEEECCCCCCCCCCC
KSLIVVPLKSKGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQ
CCEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHH
EERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALRALTY
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RATELYVQGGDVTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFS
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCEEEE
IGGGADEVMLGIICKKLGTLPRE
ECCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQFTEEHEAISRTVKRFIEQEVNPHVDEWEEAGIFPAHEVFGKLGALGMLGLSKPAAYGG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
GGLDYSYELVMAEALGVCAAGGVPLAIGVQTNMATPALARFGSDALRDEFLAPAIAGRQV
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCEE
SCIGVSEPGAGSDVASIRTSARRDGDDYVISGTKLWITNGTQADWMCCLANTSDGPPHRN
EEEECCCCCCCCHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCEEEEECCCCCCCCCCC
KSLIVVPLKSKGVHIEKKIRKIGMHSSDTAQIFFDDVRVPRRNLIGEEGQGFTYQMLQFQ
CCEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHH
EERLYGAAAALVVLDRSIDETIDYTRARKIFGRPVLDHQIVHYRLAELKTEVEALRALTY
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RATELYVQGGDVTTLASMAKLKAGRLAREVTDSCLQFWGGMGFAWESSISRTYRDTRLFS
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCEEEE
IGGGADEVMLGIICKKLGTLPRE
ECCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]