| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
Click here to switch to the map view.
The map label for this gene is 76818674
Identifier: 76818674
GI number: 76818674
Start: 1422034
End: 1422732
Strand: Direct
Name: 76818674
Synonym: BURPS1710b_A1140
Alternate gene names: NA
Gene position: 1422034-1422732 (Clockwise)
Preceding gene: 76818440
Following gene: 76817949
Centisome position: 44.69
GC content: 65.38
Gene sequence:
>699_bases ATGTCGCAAATGTACGGAACGCAGCCCGAGGGCGCGCTCTACGTCGGCAAGGGCGACCGGCTCGTGATGCAGACCGACGG GCGGCTCGTGTTCTATTCGGGCAACGACGTCGTCTGGAGCAACTGGTATTACGGCCCCGCGCCGATCCCCGGCTCGTATG CGGTCGTCGAGGATTTCGGCGTCGTCGCGATCTATCCGCCGCAGGGCGGCTATCCGACGTTCACCTGGCCGTTCGCGTCG GTCACGCCGAACAGCGGCGCGCTCGCGACGGTGGTCGGCTATCCGTTCGGCGTGAACTTCCCGGTGCTCAACGGGCGTCA ATGGCTGCAGATCTTCAACAACGTCACTTACTACCTGTGGAACAAGAGCTTCGCCGCGGACAGCGTCGCGATGCAGACCG ACGGCAATCTCGTCGTCTACAACAAGGGGCAGCCGGTCTGGTCGACGGGAACGTCGGGCAATCCGGGCACCTACATGCTG GTGACGCCTGTCGGCTTCGTGCTCGGCAAGCAGTACGGCGGCATCCTCGCGAACGTGCCCTACCCGGTGTCCGTCGATCA GTCGAGCCGCGCGAGCGGCCCGAACGATCCGAAGCCGACGCCGGCCGCGCCGCCGTCGCCCTCGCTGAACCTGCCGATCA ATGCGAGCTGGAAGTGCTATTACGTGAAGGACTGGCTCGCGTGCTACGCGCCGGGTTGA
Upstream 100 bases:
>100_bases GATATCGAACAACGGCAACTTCGCATTCGGCGTCGACGCCGCCAGCGGCAAGCTCTATTTCCACTACAGGTTCCCGACGC AGGCGTGGGGCGCGAGCGCG
Downstream 100 bases:
>100_bases GCGGACGGCCGTTGCGGGCCCGATGCACTGGGGCCGATGCCGGGAATCCGACGCCGTGTGCCCGACGCGTGAGTTCGACG TCGTCAATTCGATGTTGTCA
Product: lectin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSQMYGTQPEGALYVGKGDRLVMQTDGRLVFYSGNDVVWSNWYYGPAPIPGSYAVVEDFGVVAIYPPQGGYPTFTWPFAS VTPNSGALATVVGYPFGVNFPVLNGRQWLQIFNNVTYYLWNKSFAADSVAMQTDGNLVVYNKGQPVWSTGTSGNPGTYML VTPVGFVLGKQYGGILANVPYPVSVDQSSRASGPNDPKPTPAAPPSPSLNLPINASWKCYYVKDWLACYAPG
Sequences:
>Translated_232_residues MSQMYGTQPEGALYVGKGDRLVMQTDGRLVFYSGNDVVWSNWYYGPAPIPGSYAVVEDFGVVAIYPPQGGYPTFTWPFAS VTPNSGALATVVGYPFGVNFPVLNGRQWLQIFNNVTYYLWNKSFAADSVAMQTDGNLVVYNKGQPVWSTGTSGNPGTYML VTPVGFVLGKQYGGILANVPYPVSVDQSSRASGPNDPKPTPAAPPSPSLNLPINASWKCYYVKDWLACYAPG >Mature_231_residues SQMYGTQPEGALYVGKGDRLVMQTDGRLVFYSGNDVVWSNWYYGPAPIPGSYAVVEDFGVVAIYPPQGGYPTFTWPFASV TPNSGALATVVGYPFGVNFPVLNGRQWLQIFNNVTYYLWNKSFAADSVAMQTDGNLVVYNKGQPVWSTGTSGNPGTYMLV TPVGFVLGKQYGGILANVPYPVSVDQSSRASGPNDPKPTPAAPPSPSLNLPINASWKCYYVKDWLACYAPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25082; Mature: 24951
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMYGTQPEGALYVGKGDRLVMQTDGRLVFYSGNDVVWSNWYYGPAPIPGSYAVVEDFG CCCCCCCCCCCEEEECCCCEEEEEECCEEEEECCCEEEECCEEECCCCCCCCEEEEECCC VVAIYPPQGGYPTFTWPFASVTPNSGALATVVGYPFGVNFPVLNGRQWLQIFNNVTYYLW EEEEECCCCCCCEEECCCCEECCCCCCEEEEEECCCCCCCEEECCHHHHHHHCCEEEEEE NKSFAADSVAMQTDGNLVVYNKGQPVWSTGTSGNPGTYMLVTPVGFVLGKQYGGILANVP CCCCCCCEEEEECCCCEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHCCCCEEECCC YPVSVDQSSRASGPNDPKPTPAAPPSPSLNLPINASWKCYYVKDWLACYAPG CCEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEEEEEECCC >Mature Secondary Structure SQMYGTQPEGALYVGKGDRLVMQTDGRLVFYSGNDVVWSNWYYGPAPIPGSYAVVEDFG CCCCCCCCCCEEEECCCCEEEEEECCEEEEECCCEEEECCEEECCCCCCCCEEEEECCC VVAIYPPQGGYPTFTWPFASVTPNSGALATVVGYPFGVNFPVLNGRQWLQIFNNVTYYLW EEEEECCCCCCCEEECCCCEECCCCCCEEEEEECCCCCCCEEECCHHHHHHHCCEEEEEE NKSFAADSVAMQTDGNLVVYNKGQPVWSTGTSGNPGTYMLVTPVGFVLGKQYGGILANVP CCCCCCCEEEEECCCCEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHCCCCEEECCC YPVSVDQSSRASGPNDPKPTPAAPPSPSLNLPINASWKCYYVKDWLACYAPG CCEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA