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The map label for this gene is soxA [H]

Identifier: 76818640

GI number: 76818640

Start: 2279082

End: 2280476

Strand: Direct

Name: soxA [H]

Synonym: BURPS1710b_A1866

Alternate gene names: 76818640

Gene position: 2279082-2280476 (Clockwise)

Preceding gene: 76819218

Following gene: 76819164

Centisome position: 71.63

GC content: 68.46

Gene sequence:

>1395_bases
ATGACGAACAAAAAGATCCTGCTGAACGCGTTCGACATGAATTGCGTCGGCCATATCAATCACGGCTTGTGGACCCACCC
GCGCGACCGCTCCGCGCAGTACACCGATCTCGACTACTGGTCCGATCTCGCGCGCACGCTCGAGCGCGGCAAGTTCGACG
CGATCTTTCTCGCGGATATCGTCGGCGTCTACGACGTGTACGGCGGCGGCCCCGATCTCGCGCTGCGCGAATCGGTGCAG
GTGCCCGTCAACGATCCGCTGCTGCTCGTGCCGGCGATGGCGCAGGTGACGAAGCACCTCGGCTTCGGCGTGACCGCGAA
CCTGACGTACGAGCCGCCGTACCTGTTCGCGCGGCGGATGTCGACCCTCGATCACCTGACGAAAGGCCGCATCGGCTGGA
ACATCGTGACGGGCTATCTCGACAGCGCCGCGCGCGGCATGGGGCTCGCGCGGCAGATCGGGCACGACGACCGCTACGCG
CGCGCCGACGACTACATGGAAGTGGTCTACCAGCTCTGGGAGCGGAGCTGGGACGACGACGCCGTGATCCGCGACCGCGC
CGCGCGCGTGTTCGCGCGGCCCGACAAGGTGCGCCGCGTGCGCCACGACGGACCGTATTACTCGGTCGACGCGATTCATC
TGAGCGAGCCTTCGCCGCAGCGCACGCCGGTGCTGTATCAGGCCGGAGCGTCGGCGCGCGGCGTCGAGTTCGCCGCGAAG
CACGCCGAATGCGTGTTCGTGAACGGCCAGAGCAAGGCCGCCGCGCGCTCGGCGGTGGCCGACATTCGCGCGGCCGCCGC
GCGGATCGGCCGCGATCCGGCGTCGATCAAGGTCTTCGCGGGCATCACGGTCGTGACGGACGAGAACGAGCGGGCCGCGC
GCGAGAAGTTCGACGAATACCGGCGCCACGCGAATCCGGAGGCGGGCCTCGCGCACTTCGCGAGCTCGACCGGCATCGAT
TTCTCGCGCTTCGGCCTCGACGAGCCGATCGCGCACGTGAAGACCGATTCGATTCAGTCGGCCGTCGACGCGATCTCGAA
GAAGAGCGCGTCCGGCGCATGGACCGTGCGGCGCATGCTCGATCAGATGTCGATCGGCGGCCGCTATCAGCCGGTGGTCG
GCTCGCCGTCGCAAGTGGCGGACGAGCTTGCCGCATGGGTCGACGAAACGGATGTCGACGGCTTCAACGTGACGCGCACG
GTCGTGCCCGAGTCGTTCGACGATTTCGTCGACCGGGTGGTGCCCGCGTTGCAGGATCGCGGCCTCTACAAGGAGGACTA
CGATCGCGCGCCGACGCTGCGCGCGAAGCTGTTCGGCGCGGGCGGGCGGCTGCCTGACTGGCATGCGGGCGCGCGGCACC
GGTTCGGCCGCGCGCGCGAAACCGCGCGGACATGA

Upstream 100 bases:

>100_bases
TCATCGCGATCTATCAGCATTCGCCGGCGGTCCGGCAGGCGCTGGACGACGCATTCGGCCGGCTGTACGCGATCGCGTGG
TGAAACCGCAGGCGCGCGCG

Downstream 100 bases:

>100_bases
TTGAGCGACGAGGCGATCCGATGGCGCAGCTACTCGATTCACCCGGTTTCATCGAACGCTCGGCCGCCGTGCCGCACAAG
GCCGCGGCCGCGCCGGCTAC

Product: monoxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADIVGVYDVYGGGPDLALRESVQ
VPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYA
RADDYMEVVYQLWERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASARGVEFAAK
HAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEYRRHANPEAGLAHFASSTGID
FSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRMLDQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRT
VVPESFDDFVDRVVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGRARETART

Sequences:

>Translated_464_residues
MTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADIVGVYDVYGGGPDLALRESVQ
VPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYA
RADDYMEVVYQLWERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASARGVEFAAK
HAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEYRRHANPEAGLAHFASSTGID
FSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRMLDQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRT
VVPESFDDFVDRVVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGRARETART
>Mature_463_residues
TNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADIVGVYDVYGGGPDLALRESVQV
PVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRMSTLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYAR
ADDYMEVVYQLWERSWDDDAVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASARGVEFAAKH
AECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEYRRHANPEAGLAHFASSTGIDF
SRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRMLDQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRTV
VPESFDDFVDRVVPALQDRGLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGRARETART

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=284, Percent_Identity=26.7605633802817, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 51522; Mature: 51391

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADI
CCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHH
VGVYDVYGGGPDLALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRM
HHHHHHCCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH
STLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYARADDYMEVVYQLWERSWDDD
HHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
AVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASARGVEFAAK
HHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHCC
HAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEY
CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHH
RRHANPEAGLAHFASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRML
HHHCCCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRTVVPESFDDFVDRVVPALQDR
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHC
GLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGRARETART
CCCHHHCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNKKILLNAFDMNCVGHINHGLWTHPRDRSAQYTDLDYWSDLARTLERGKFDAIFLADI
CCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHH
VGVYDVYGGGPDLALRESVQVPVNDPLLLVPAMAQVTKHLGFGVTANLTYEPPYLFARRM
HHHHHHCCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH
STLDHLTKGRIGWNIVTGYLDSAARGMGLARQIGHDDRYARADDYMEVVYQLWERSWDDD
HHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
AVIRDRAARVFARPDKVRRVRHDGPYYSVDAIHLSEPSPQRTPVLYQAGASARGVEFAAK
HHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHCC
HAECVFVNGQSKAAARSAVADIRAAAARIGRDPASIKVFAGITVVTDENERAAREKFDEY
CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHH
RRHANPEAGLAHFASSTGIDFSRFGLDEPIAHVKTDSIQSAVDAISKKSASGAWTVRRML
HHHCCCCHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DQMSIGGRYQPVVGSPSQVADELAAWVDETDVDGFNVTRTVVPESFDDFVDRVVPALQDR
HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHC
GLYKEDYDRAPTLRAKLFGAGGRLPDWHAGARHRFGRARETART
CCCHHHCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]