Click here to switch to the map view.

The map label for this gene is 76818573

Identifier: 76818573

GI number: 76818573

Start: 2363571

End: 2363981

Strand: Direct

Name: 76818573

Synonym: BURPS1710b_A1946

Alternate gene names: NA

Gene position: 2363571-2363981 (Clockwise)

Preceding gene: 76818153

Following gene: 76819325

Centisome position: 74.28

GC content: 58.15

Gene sequence:

>411_bases
TTGGTGTTCAAGGCCAGTGAAACCTGTCAGCGCATCGCGCAGATTGAAGGGGTTGGCCCCAAGACGGCTACCGCCATCGT
TGCTGCAGTTTCTGACCCAAAAGACTTCCGGAACGGCCGACACTTTGCTGCCTGGCTCGGTCTTGTTCCCCGTCAGAGTT
CCAGCGGAGACCGAACGCACCTACTCGGCATCAGCAAGCGAGGCGACCGGCATCTACGCACCTTGCTCATACACGGTGCT
CGCGCGGTACTCCGAACCGCACCAACAAAACATGACAAGAAACACGCCTGGGCGCTCGCGTTGAAAGCCAGACGAGGTGC
TAATCGAGCCATTGTTGCGATCGCGAACAAGATGGCTCGCGTAATCTGGTCGATGCTCGCAACCGGCCAGTCGTATCAGA
AAGCAGGGTAG

Upstream 100 bases:

>100_bases
CACCGCCATGCAGAGCAAGACATCACTGATTATCTAGTCGATTTTTACAACCATCGTCGCCTTCACTCGGCTGCGAAGGG
ACTTCGACAGACGTATCGAT

Downstream 100 bases:

>100_bases
CAACTTCACCAACGATGCGTTGACGAATTGACGAGTGGCACACCGGTCGATCCGGGCGAGCAGGGAACCTGATTTTTATA
ACGGCCCTTGAGGTCTTCCA

Product: rmpB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MVFKASETCQRIAQIEGVGPKTATAIVAAVSDPKDFRNGRHFAAWLGLVPRQSSSGDRTHLLGISKRGDRHLRTLLIHGA
RAVLRTAPTKHDKKHAWALALKARRGANRAIVAIANKMARVIWSMLATGQSYQKAG

Sequences:

>Translated_136_residues
MVFKASETCQRIAQIEGVGPKTATAIVAAVSDPKDFRNGRHFAAWLGLVPRQSSSGDRTHLLGISKRGDRHLRTLLIHGA
RAVLRTAPTKHDKKHAWALALKARRGANRAIVAIANKMARVIWSMLATGQSYQKAG
>Mature_136_residues
MVFKASETCQRIAQIEGVGPKTATAIVAAVSDPKDFRNGRHFAAWLGLVPRQSSSGDRTHLLGISKRGDRHLRTLLIHGA
RAVLRTAPTKHDKKHAWALALKARRGANRAIVAIANKMARVIWSMLATGQSYQKAG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 14814; Mature: 14814

Theoretical pI: Translated: 12.16; Mature: 12.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKASETCQRIAQIEGVGPKTATAIVAAVSDPKDFRNGRHFAAWLGLVPRQSSSGDRTH
CCCCCHHHHHHHHHHCCCCCHHHHHHEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCCEE
LLGISKRGDRHLRTLLIHGARAVLRTAPTKHDKKHAWALALKARRGANRAIVAIANKMAR
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
VIWSMLATGQSYQKAG
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVFKASETCQRIAQIEGVGPKTATAIVAAVSDPKDFRNGRHFAAWLGLVPRQSSSGDRTH
CCCCCHHHHHHHHHHCCCCCHHHHHHEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCCEE
LLGISKRGDRHLRTLLIHGARAVLRTAPTKHDKKHAWALALKARRGANRAIVAIANKMAR
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
VIWSMLATGQSYQKAG
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]