Definition Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence.
Accession NC_007435
Length 3,181,762

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The map label for this gene is 76818561

Identifier: 76818561

GI number: 76818561

Start: 1145186

End: 1145596

Strand: Direct

Name: 76818561

Synonym: BURPS1710b_A0884

Alternate gene names: NA

Gene position: 1145186-1145596 (Clockwise)

Preceding gene: 76819350

Following gene: 76817453

Centisome position: 35.99

GC content: 67.4

Gene sequence:

>411_bases
ATGGATACGAAGCACGATGGCGGCTCGCCGATCGCCGAACGGCGCACCGAAGGCTTTCGCTTGCTCGAATCGGGCATGCC
GCAGGCCGACGTTGCGCGAAGGCTCGTCGTATCGCGGCAATCGGTCTGCAGATGGGCGAAACGGCTCGCGGAACGCGACG
GGCGCATCGCGAAGGCGCCGGGACGGCCACGGCGGCTGAATTCCGCGCAATGCGCGACGCTTCGCGCGATGCTCGACGAC
GGCGCGCTCGCGGCGGGCTTCGCAAGCCCGCAGTGGACGCTCGCGCGAGTACGCAAGCTGATCGAACGCGAATTCGGCGT
CGCATACAGCAAGACGGGCGGATGGGAATTGCTGCGCACGCTCGGCGTCTCGCTGCAACGAACGGAAAGGCATCCGCACA
TCGCGCGCTGA

Upstream 100 bases:

>100_bases
TCATGGACATTCTAATGTGATCTTCATCGGCCTTGCGTCGCTCTTTTCAATCATTTAGCAATCCGTCACGTCCATGAGTT
TTTCAACCGGGAGAACGCAG

Downstream 100 bases:

>100_bases
CCGGTATCCGGAGATTCGTGTCGACTTGGTGACCCGTTCGCGGCGCGATCGCGCCGCAAGTACATGCCTGCGTCACGCGC
CTATGATCGGCTGCCGCACA

Product: transposon protein

Products: NA

Alternate protein names: Transposase

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAPGRPRRLNSAQCATLRAMLDD
GALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRTLGVSLQRTERHPHIAR

Sequences:

>Translated_136_residues
MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAPGRPRRLNSAQCATLRAMLDD
GALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRTLGVSLQRTERHPHIAR
>Mature_136_residues
MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAPGRPRRLNSAQCATLRAMLDD
GALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRTLGVSLQRTERHPHIAR

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15203; Mature: 15203

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAP
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
GRPRRLNSAQCATLRAMLDDGALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LGVSLQRTERHPHIAR
HCCHHHHHCCCCCCCC
>Mature Secondary Structure
MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAP
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
GRPRRLNSAQCATLRAMLDDGALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LGVSLQRTERHPHIAR
HCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA