| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
Click here to switch to the map view.
The map label for this gene is 76818561
Identifier: 76818561
GI number: 76818561
Start: 1145186
End: 1145596
Strand: Direct
Name: 76818561
Synonym: BURPS1710b_A0884
Alternate gene names: NA
Gene position: 1145186-1145596 (Clockwise)
Preceding gene: 76819350
Following gene: 76817453
Centisome position: 35.99
GC content: 67.4
Gene sequence:
>411_bases ATGGATACGAAGCACGATGGCGGCTCGCCGATCGCCGAACGGCGCACCGAAGGCTTTCGCTTGCTCGAATCGGGCATGCC GCAGGCCGACGTTGCGCGAAGGCTCGTCGTATCGCGGCAATCGGTCTGCAGATGGGCGAAACGGCTCGCGGAACGCGACG GGCGCATCGCGAAGGCGCCGGGACGGCCACGGCGGCTGAATTCCGCGCAATGCGCGACGCTTCGCGCGATGCTCGACGAC GGCGCGCTCGCGGCGGGCTTCGCAAGCCCGCAGTGGACGCTCGCGCGAGTACGCAAGCTGATCGAACGCGAATTCGGCGT CGCATACAGCAAGACGGGCGGATGGGAATTGCTGCGCACGCTCGGCGTCTCGCTGCAACGAACGGAAAGGCATCCGCACA TCGCGCGCTGA
Upstream 100 bases:
>100_bases TCATGGACATTCTAATGTGATCTTCATCGGCCTTGCGTCGCTCTTTTCAATCATTTAGCAATCCGTCACGTCCATGAGTT TTTCAACCGGGAGAACGCAG
Downstream 100 bases:
>100_bases CCGGTATCCGGAGATTCGTGTCGACTTGGTGACCCGTTCGCGGCGCGATCGCGCCGCAAGTACATGCCTGCGTCACGCGC CTATGATCGGCTGCCGCACA
Product: transposon protein
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAPGRPRRLNSAQCATLRAMLDD GALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRTLGVSLQRTERHPHIAR
Sequences:
>Translated_136_residues MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAPGRPRRLNSAQCATLRAMLDD GALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRTLGVSLQRTERHPHIAR >Mature_136_residues MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAPGRPRRLNSAQCATLRAMLDD GALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRTLGVSLQRTERHPHIAR
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15203; Mature: 15203
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAP CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC GRPRRLNSAQCATLRAMLDDGALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRT CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LGVSLQRTERHPHIAR HCCHHHHHCCCCCCCC >Mature Secondary Structure MDTKHDGGSPIAERRTEGFRLLESGMPQADVARRLVVSRQSVCRWAKRLAERDGRIAKAP CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC GRPRRLNSAQCATLRAMLDDGALAAGFASPQWTLARVRKLIEREFGVAYSKTGGWELLRT CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LGVSLQRTERHPHIAR HCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA