| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818544
Identifier: 76818544
GI number: 76818544
Start: 995420
End: 996652
Strand: Direct
Name: 76818544
Synonym: BURPS1710b_A0751
Alternate gene names: NA
Gene position: 995420-996652 (Clockwise)
Preceding gene: 76817779
Following gene: 76819590
Centisome position: 31.29
GC content: 66.67
Gene sequence:
>1233_bases TTGCGGATTACGATCGAATCGCGCCTTTTGCGCCTTTCTCATTGCAAGGAACCGGATCGCATGAATGCTTCGAGCATGGC GTCGGGTGCGCGGCCGAGCGCCACCGACCACAAGGAACACCTGATCGACGCATTGCGCGGCTTCGCCGCGCTTGTCGTCG CGTATTTCCATTGTCGGCAGGTCGTGTGGGTCGGCATGCAGCACTTCCATCGGACGTATGGGCATGCGCTCGAGCCGGGC GCGATCGTCGGCTATCTGACGTTCCCGTTCGCATGGGGCTCGGCCGGCGTGCCGATCTTCTTCGTGATCAGCGGCTATTG CATCCATCGCAACGCGGCGCTCAAGCTCGCCGCCGATCCGTCGTACCGGCTCAACGCGCCGAACTTCTGGACGCGCCGCT TCGCGCGCATCTATCCGGTGCTGCTCGCCGCGCTCGTCGCCACGCTCGTGTTCGATTCGATCAGCCTGCAGATCGAGCCC GTCAGCCACAAGATCCGCGACATCGGGCTCGCGTCGTTCGTCGTCAACCTGCTGTCGCTGCAGGGCGTCGCGGGCTACAC GTACGGTTCGAACGGCGCGCTGTGGACGCTGTCGCTCGAAGTGCAGTTCTATGCGATCTATCCGCTCCTGTTCGCGGCGC GCCGCCGCTTCGGGATGGTTCCCGTCGTCGTCGCGATCGCGCTCGTCAACGTCGCTTCGGCGTGGCTGCTCGAGCGGCAT GACCTGCAATTCTTCACGTCGTACTGGCTGTCGTGGACGGTCGGCGCGTGGATCGCCGACGCCCGCGCGCAACGGGGCGC GTGTGCCGCGCCGGCGCCGTCGCGCCGCTGGTATGCGGCCGCGGCGCTCGGCATCGCGCTCGGCTGCGTCGCGTTTCATT TCGGGCAGTACGGCGCGTTCCAGCTGTGGGCGGCCGGCTTCGCGTGCTACCTGCACGCGGCGCTCGCGCGGCCCGCGCCG GCGTTCGCGCCGATGCGTGCGCTATCGTGGTTCGGCGACTTCAGCTATTCGCTGTATCTGATCCACCTACCGTTCTTCGT GTGCCTGGCGTCGGTGCTGTATCGCTCGGAGCCGCAGTTGTCGATCTGGCCGTCGTTCGCGTTCATCGCGGCCGTCATCC CCGTTGCGTACCTGTTCTACCGGATGTTCGAGCTGCCGGCGATGCGCTGGTCGACCAGCCTCAAGCCGAAGCGGGCCGTC GCGGCGGCCGCGCGGCAGCAGATGCCCGTTTGA
Upstream 100 bases:
>100_bases ATAATTTTCCGCCATACCGCAACGTGAAAACCGTTACGAACGGATACGTTTAATTACACTTATTCGGTAGGCGATTTTTT TATTCTCCCGCCCGTATTTC
Downstream 100 bases:
>100_bases CGGCCGACGGGCGGCGCGCCGGAACCGGCCGCTCGCGCCGCCGCCCAGCGCGGGCGCACCCCAGGGACGGCGCGCCTGCC GCTCGCCGCCGCGGCCTCAC
Product: putative lipopolysaccharide biosynthesis-like membrane protein
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis- Related Membrane Protein; O-Antigen Acetylase
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MRITIESRLLRLSHCKEPDRMNASSMASGARPSATDHKEHLIDALRGFAALVVAYFHCRQVVWVGMQHFHRTYGHALEPG AIVGYLTFPFAWGSAGVPIFFVISGYCIHRNAALKLAADPSYRLNAPNFWTRRFARIYPVLLAALVATLVFDSISLQIEP VSHKIRDIGLASFVVNLLSLQGVAGYTYGSNGALWTLSLEVQFYAIYPLLFAARRRFGMVPVVVAIALVNVASAWLLERH DLQFFTSYWLSWTVGAWIADARAQRGACAAPAPSRRWYAAAALGIALGCVAFHFGQYGAFQLWAAGFACYLHAALARPAP AFAPMRALSWFGDFSYSLYLIHLPFFVCLASVLYRSEPQLSIWPSFAFIAAVIPVAYLFYRMFELPAMRWSTSLKPKRAV AAAARQQMPV
Sequences:
>Translated_410_residues MRITIESRLLRLSHCKEPDRMNASSMASGARPSATDHKEHLIDALRGFAALVVAYFHCRQVVWVGMQHFHRTYGHALEPG AIVGYLTFPFAWGSAGVPIFFVISGYCIHRNAALKLAADPSYRLNAPNFWTRRFARIYPVLLAALVATLVFDSISLQIEP VSHKIRDIGLASFVVNLLSLQGVAGYTYGSNGALWTLSLEVQFYAIYPLLFAARRRFGMVPVVVAIALVNVASAWLLERH DLQFFTSYWLSWTVGAWIADARAQRGACAAPAPSRRWYAAAALGIALGCVAFHFGQYGAFQLWAAGFACYLHAALARPAP AFAPMRALSWFGDFSYSLYLIHLPFFVCLASVLYRSEPQLSIWPSFAFIAAVIPVAYLFYRMFELPAMRWSTSLKPKRAV AAAARQQMPV >Mature_410_residues MRITIESRLLRLSHCKEPDRMNASSMASGARPSATDHKEHLIDALRGFAALVVAYFHCRQVVWVGMQHFHRTYGHALEPG AIVGYLTFPFAWGSAGVPIFFVISGYCIHRNAALKLAADPSYRLNAPNFWTRRFARIYPVLLAALVATLVFDSISLQIEP VSHKIRDIGLASFVVNLLSLQGVAGYTYGSNGALWTLSLEVQFYAIYPLLFAARRRFGMVPVVVAIALVNVASAWLLERH DLQFFTSYWLSWTVGAWIADARAQRGACAAPAPSRRWYAAAALGIALGCVAFHFGQYGAFQLWAAGFACYLHAALARPAP AFAPMRALSWFGDFSYSLYLIHLPFFVCLASVLYRSEPQLSIWPSFAFIAAVIPVAYLFYRMFELPAMRWSTSLKPKRAV AAAARQQMPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45601; Mature: 45601
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITIESRLLRLSHCKEPDRMNASSMASGARPSATDHKEHLIDALRGFAALVVAYFHCRQ CEEEHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VVWVGMQHFHRTYGHALEPGAIVGYLTFPFAWGSAGVPIFFVISGYCIHRNAALKLAADP HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEECCCEEEEECCC SYRLNAPNFWTRRFARIYPVLLAALVATLVFDSISLQIEPVSHKIRDIGLASFVVNLLSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHH QGVAGYTYGSNGALWTLSLEVQFYAIYPLLFAARRRFGMVPVVVAIALVNVASAWLLERH CCCCCEEECCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DLQFFTSYWLSWTVGAWIADARAQRGACAAPAPSRRWYAAAALGIALGCVAFHFGQYGAF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH QLWAAGFACYLHAALARPAPAFAPMRALSWFGDFSYSLYLIHLPFFVCLASVLYRSEPQL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCE SIWPSFAFIAAVIPVAYLFYRMFELPAMRWSTSLKPKRAVAAAARQQMPV EECHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MRITIESRLLRLSHCKEPDRMNASSMASGARPSATDHKEHLIDALRGFAALVVAYFHCRQ CEEEHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VVWVGMQHFHRTYGHALEPGAIVGYLTFPFAWGSAGVPIFFVISGYCIHRNAALKLAADP HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEECCCEEEEECCC SYRLNAPNFWTRRFARIYPVLLAALVATLVFDSISLQIEPVSHKIRDIGLASFVVNLLSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHH QGVAGYTYGSNGALWTLSLEVQFYAIYPLLFAARRRFGMVPVVVAIALVNVASAWLLERH CCCCCEEECCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DLQFFTSYWLSWTVGAWIADARAQRGACAAPAPSRRWYAAAALGIALGCVAFHFGQYGAF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH QLWAAGFACYLHAALARPAPAFAPMRALSWFGDFSYSLYLIHLPFFVCLASVLYRSEPQL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCE SIWPSFAFIAAVIPVAYLFYRMFELPAMRWSTSLKPKRAVAAAARQQMPV EECHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA