| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818418
Identifier: 76818418
GI number: 76818418
Start: 1191035
End: 1192579
Strand: Direct
Name: 76818418
Synonym: BURPS1710b_A0934
Alternate gene names: NA
Gene position: 1191035-1192579 (Clockwise)
Preceding gene: 76819506
Following gene: 76819282
Centisome position: 37.43
GC content: 69.32
Gene sequence:
>1545_bases GTGCACGTGACGGGCAAGGTCGAGGAGAAATACGGGCAGACGCAGCTCACGCTGTCGGGCGCCGTCGCGGTCTGCGCGAG CGGCCAGTCGGTCACGCCGGCGACGCTCGCGCTGCCCGTCGACAGCCCGAACGCGTTCGCCGCGTACGAAGGCATGCTCG TGCGCCTGCCGCAAACGCTGACCGTCACCGAGGTCTATGAACTCGGCCGCTACGGCAGCGTGCTGCTCAGCAACGGGCGT CTGCGCACGCCGACGAGCGTCGTGCCGCCCGCGCAGGCGAAGGCGGTGGCCGAGGCGAATGCGCGCAACCGGCTGATCCT CGACGACGGCTCGAACAAGCAGAATCCGGCGACCGTCCCGTATCCGGCGCCGGCGCTCTCCGCCGCGAACACGCTGCGCG CGGGCTACACGGCCGCCGATGTCGAGGGCGTGCTCGAGCTGCGCTACGGCGCATGGCGCCTGCAACCGGTGCCGGGCGCG CGTACGCCCACTTTCGGCGCGAGCGCGAACCCGCGCACCGCCGCGCCCGCGCGCGATCCTCGCGCGAACCTGCGGGTCGC TTCGTTCAACGTACTGAACTACTTCAACGGCGACGGCGCGGGCGGCGGCTTCGACGATCCGAGCAACCGGGGCGCGAAGA ACTACGAAGAGTTCGTCCGGCAGGACGCGAAGATCGTCAGCGCGCTGAAGGCGCTCGACGCCGACGTGATCGGCCTGATG GAAATCGAGAACGACGGCTACGGCCCGCTGAGCGCGGTGCGCCAGCTCGCGGCGAAGCTCGGCGAGAACTGGCGGGTGGT GGACCCGGGCAGCGCGCGGCTCGGCGGCGATGCGATCGCGGTCGCGCTGATCTACGACAGCCGCAAAGTGAAGCCGATCG GCAACGCGGCGACGCTCGCGATCGACGACAAGAACCGTCAGCCGCTCGCGCAGACATTCCGGCCGCTCGGCGGCTCGCGT GCGGTGACGGTCGCCGTCAATCATCTGAAATCGAAGAACTGCCCGGATGCGACGGGCGATGACCTCGATCAGGGAGACGG CCAGGGCTGCTGGAATGCGACGCGCTCGCGCGCGGCGGCGAAGATTGCCGATTGGCTCGCGCGCAATCCGACGGGCGCGC CCAGCGAAGGCGTGCTGCTGATCGGCGACCTCAACAGCTACACGTACGAGGATCCGGTTCGCACGCTCGAATCGCGCGGC TACGTGAATCTCGTGTCGAGCAAGGTCGGCTCCGGCGCATACAGCTACGTCTACAACGGCGAGGCGGGCTACCTCGACCA CGCGCTCGCGACGAACGCGCTCGCCTGGCGCGTGAAGGCGGTGCACGACTGGCACATCAACGCGGACGAGCCGATCGCCC TGCAATACACGCTCGCATACAAGAGCGCCGAACAGCAGCGCACGTATTACGCGCCCGACGCGTATCGCTCGTCCGATCAC GATCCGGTACTGATCGACATCGCGCTCGCCGACGAATATGCGGCCGCGGCGTCGCGCCGAGGCGCGGAGATGGCGGCCGC GCACAGCCGTCGCCCGTGGCATTGA
Upstream 100 bases:
>100_bases CTTCGTCCAGCAGGCCGATCCGCAGCGCCGCAACCAGCCCGGCGTATCCGAAGGGCTGTTCGTCTACTCGCCGAAAGCCC GCGCGCGCGCGGGCGAGCTC
Downstream 100 bases:
>100_bases CGCGTCCGGCGGGACGTCGCGCGCCGATGTGTCGCGTGAGCGCGGGCTCGAGCGCGACGCGCGCCGCATGACAGGCGGCA GGCGGCGCGCAAGGCATGAC
Product: extracellular nuclease
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; 5-Nucleotidase Domain Protein; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain-Containing Protein; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; Endonuclease/Exonuclease/Phosphatase Family; 5-Nucleotidase; PKD Domain-Containing Protein; Exported Nuclease; Outer Membrane Adhesin Like Proteiin; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Endonuclease I; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTLTVTEVYELGRYGSVLLSNGR LRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAANTLRAGYTAADVEGVLELRYGAWRLQPVPGA RTPTFGASANPRTAAPARDPRANLRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLM EIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLAIDDKNRQPLAQTFRPLGGSR AVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPVRTLESRG YVNLVSSKVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDH DPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH
Sequences:
>Translated_514_residues MHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTLTVTEVYELGRYGSVLLSNGR LRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAANTLRAGYTAADVEGVLELRYGAWRLQPVPGA RTPTFGASANPRTAAPARDPRANLRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLM EIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLAIDDKNRQPLAQTFRPLGGSR AVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPVRTLESRG YVNLVSSKVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDH DPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH >Mature_514_residues MHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTLTVTEVYELGRYGSVLLSNGR LRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAANTLRAGYTAADVEGVLELRYGAWRLQPVPGA RTPTFGASANPRTAAPARDPRANLRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLM EIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLAIDDKNRQPLAQTFRPLGGSR AVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNPTGAPSEGVLLIGDLNSYTYEDPVRTLESRG YVNLVSSKVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDH DPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54792; Mature: 54792
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTL CCCCCCHHHHCCCEEEEECCEEEEEECCCCCCCEEEEEECCCCCCHHHHCCEEEECCCEE TVTEVYELGRYGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVP EHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCC YPAPALSAANTLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDP CCCCHHHHHHHHHCCCCHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC RANLRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLM CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE EIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLA EECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEE IDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAA EECCCCCCHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KIADWLARNPTGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNG HHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEHHHCCCCEEEEEECC EAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDH CCCCHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEEECCHHHCCEEECCCCCCCCCC DPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH CCEEEEEEECCHHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure MHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTL CCCCCCHHHHCCCEEEEECCEEEEEECCCCCCCEEEEEECCCCCCHHHHCCEEEECCCEE TVTEVYELGRYGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVP EHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCC YPAPALSAANTLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDP CCCCHHHHHHHHHCCCCHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC RANLRVASFNVLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLM CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE EIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLA EECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEE IDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAA EECCCCCCHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KIADWLARNPTGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNG HHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEHHHCCCCEEEEEECC EAGYLDHALATNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDH CCCCHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEEECCHHHCCEEECCCCCCCCCC DPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH CCEEEEEEECCHHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA