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The map label for this gene is pcaH [H]

Identifier: 76818297

GI number: 76818297

Start: 461607

End: 462311

Strand: Direct

Name: pcaH [H]

Synonym: BURPS1710b_A0318

Alternate gene names: 76818297

Gene position: 461607-462311 (Clockwise)

Preceding gene: 76819742

Following gene: 76817494

Centisome position: 14.51

GC content: 68.37

Gene sequence:

>705_bases
ATGGATTCCTCGACGCTCGCGCCGCGCGACTGGCCGTCGCATCCCGCGTACATTCATCCGCCGTACCGCTCTTCCGTGAA
GCGCGGCCCGACGCAGCCGCTGATTCCGCTGAAGGAGACGCTGCGTAACCAGCACGCGCCCGTCTACGGCGCGGACGATC
TCGGCGCGCTCGACCACGATCTGACGAAGAACGCGGCGAAGAACGGCGAGCCGCTCGGCGAGCGGATCGTCGTCACGGGC
CGTGTGCTCGACGAGGGCGGCAAGCCGGTGCGCGACACGCTCGTCGAGGTCTGGCAGGCGAACGCCGCGGGCCGCTACGT
GCACAAGGTCGACCAGCACGACGCGCCGCTCGACCCGAACTTCCTCGGCGCGGGCCGGTGCCTGACCGACGCGAACGGCC
GCTATCGGTTCCTCACGATCAAGCCGGGCGCGTATCCGTGGGGCAACCATCCGAACGCCTGGCGGCCGAACCATATCCAT
TTCTCGTTGTTCGGCGACTACTTCGGCTCGCGGCTCGTCACGCAGATGTATTTCCCGGGCGATCCGCTCCTCGCGCTCGA
CCCGATCTTCCAGGGCACGCCCGAGGACGCGCGCGAGCGGCTGATCTCGCGCTTCTCGATCGACACGACCGAAGAAGGCT
TCGCGCTCGGCTACGAATTCGACATCGTGCTGCGCGGCCGCGACGCCACCCCGATGGAGCGCTGA

Upstream 100 bases:

>100_bases
AGTTATACGATTCGCGATAAAACATCATTTTGCATAACTTTCCGCATTAGCTAAAGTCCTGTCACCCCCCTTGACAATCA
TCAACCTGGAGACGTTTCCG

Downstream 100 bases:

>100_bases
ACATGACGACGCTGAAACAGACCCCTTCGCAGACCGTCGGCCCGTACTTCGCGTATGGCCTCTGCCCGCAGCAGTACAAC
TACGATCTGAAGAGCCTCTT

Product: protocatechuate 3,4-dioxygenase subunit beta

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHDLTKNAAKNGEPLGERIVVTG
RVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIH
FSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDATPMER

Sequences:

>Translated_234_residues
MDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHDLTKNAAKNGEPLGERIVVTG
RVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIH
FSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDATPMER
>Mature_234_residues
MDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHDLTKNAAKNGEPLGERIVVTG
RVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIH
FSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDATPMER

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 26183; Mature: 26183

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHD
CCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHH
LTKNAAKNGEPLGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPN
HHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC
FLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPG
CCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHEECCC
DPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDATPMER
CCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHD
CCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHH
LTKNAAKNGEPLGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPN
HHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC
FLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPG
CCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHEECCC
DPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDATPMER
CCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]