| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818230
Identifier: 76818230
GI number: 76818230
Start: 1623639
End: 1625807
Strand: Direct
Name: 76818230
Synonym: BURPS1710b_A1313
Alternate gene names: NA
Gene position: 1623639-1625807 (Clockwise)
Preceding gene: 76819084
Following gene: 76817714
Centisome position: 51.03
GC content: 68.6
Gene sequence:
>2169_bases ATGCAAGGGGACGTTCATGAACCTCGACTACTTCACGCTGACGCGCCGCCTCGTGCTCGCCGCGTCGCTCGCCGCCTCGC TCGGCGGCTGCATGTCCAGCACGCCCGTCTGGGACGGCCGCTTCGGCGATTCGGTGCGCGCCGTGATGCAGGCGCAGATC ATCGATCCGCACGCGGCCGAGCATGCGCGGTCCGCGCCCGGCGTCGACGGGCGCGCGGCGGCCGCCGCGCTCGACAACTA CGACAAGTCGTTCCAGCAGACCGAACCCACGCCGAACGCGTTCGTGATCGGCGTGGGCGGCGGCAAGACGGGCGGCCAAT AACCACACTCGCTCAGGGAGACCGTCATGTCTCGCGTCACTTCCTCGTCAGGCGGCGCCCGTCCATGCGGGCGCCGCCGC CAGCGCGGCGTCGTGTCGATTCTCGTCGCGCTGATGCTCGCGGTGCTGATCGGCTTCGTCGGCCTCGCGCTGGATCTCGG CAAGCTCTACGTGACGCGCAGCGAGCTGCAGAACAGCGCGGACGCGTGCGCGCTCGCCGCGGCGCGGGATCTGACGGGTG CCATCAATCTGTCCGTGCCGGAGGCGGCCGGCATCACCGCCGGCCACCTCAACTACGCGTTGTTCGAGCAGTTTCCGGTT CAGATGCAGACGAACTCGAACGTCACGTTCAGCGATTCGCTGAGCAATCCGTTTCAACCGAAGAACGCGATCGCGTCGCC TTCGTCGATCAAGTACGTGAAGTGCACGACATCGCGCACGGGCATCGTCAACTGGTTCATCCAGACGCTCAACCTGGTGC CGGGCGTGACCGTGGCGAACGCGTCGGTGTCCGCGACGGCCGTGGCGACCGTCGGCGCCGCGCAGACCACCTGCGCGATT CCGGTGTTCATCTGCAAGGCCGGCACGCAGACGAGCCCGCCCGTGGCCGGCGCGACCTACAACATCGGCGACTGGCTCTC CGCGAAGACGGGCTCGCCGCCGTCGTTCGGCGCGGGCAACTTCGGCTGGTCGGCGCTCGACGGCTCGAACAGCGCGTCGT CGATCGCCAACGAGCTGACGGGCAACTACTGCGCGCTGCCCGCCACCGGCTCGCAGGTCGGCACGCCCGGCGACAAGGCG GCGACGACCAACGCGTACAACACGCGCTTCGGCATCTACGCGAATCCGTACAAGAACCCGTCGTACGGCACGCCCGACTT CACCGGCTTCGCCTACGACGCGACCACATGGCCCTCGCAGAGCAACGCGTATTCGGACTTCGTCAGCAAGCGCCTGGCGT TCGCGAGCTATCAGGGCGACCTGATCACCGGCATCAACACGGGCGGCTCGTACAACCCGAGCTACTACGCGGCGGGCGCC GACCGCAGGCTCGCGCTCGCGCCCGAGGTGGACTGCTCGGTGCTGCTGAGCGGCCACAGCGCGCCCGTGCTCTCGTGGGA TTGCGTGCTGATGCTCGACCCGATGGGCTCCGGCGGCAGCGCGACGCCCGTGCATCTCGAGTACCGCGGCTCGTCGACCG CGCCCGGCAGCCCGTGCGCGACGCAAGGCACGCCGGGCAACGGCAGCTCGGTCGGCCCGCAGGTGCCCGTGCTGCTCCAA TGAACACGAGACGACGAGAGACGATCATGAACCGATTTTCATTGCCCCCCCGCCCTTCGCGGATGCGCGGCGCCGTCGCG GTGGAATTCGCGATCGTGATGATTCCGCTCGTGCTGCTCGCAACCGGCGTCGCGGAGTTCGGCCGCGCGATCTATCAGTA CGAGGCGCTGACGAAGGCGACGCGCGACGCGGCGCGCTACCTGTCGACGTACCTGCCGACCGATCCCGCGTACCCGCTCG CGCAGGCGCAGTGCCTCGCCGTCTACGGCAGCACCACCTGCGGCTCGACGGGCAGCGAGCTCGCGCCGGGCCTCGCGACG TCGATGGTCATCGTCTGCGACGCCGCGCACGCGCCCGATTGCAGCGACTCGTCCGACCCGGCGCAGTTCGCGAACGTGCC GACCTACGACACGAACAACGGCTCGCCCGACCCGGCGAGCCTCGCCGGCAGCATGAATCTCGTCGAGGTCAAGATCAAGG GCTATCAGTACCGGCCGATTCCCGCGTTTCCGGGGCTGCCGAACCTGAGCTTCGGCAACATCGTCACCGTGATGAGGCAA GTGTCATGA
Upstream 100 bases:
>100_bases CGGCCGCCGCCGGCGCGACCGCGAAGCGCCAGGGCGCGCAGCCGCCGCAACAACTCGCCAACGCAGGCGCGATCGCGCCC GCCGCCGATCGCTGAACTTC
Downstream 100 bases:
>100_bases ACACGCGCCCCTTCGCCCTCGCCGGGCGCCGCGCGCAGCGCGGCATGGCCGCCGTCGAGTTCGCGCTCGTCGCCGCGATC CTCTGCACGATCCTGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadG; TadE-Like; TadE-Like Protein; Flp Type Pilus Assembly Protein; Pseudopilin
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MQGDVHEPRLLHADAPPRARRVARRLARRLHVQHARLGRPLRRFGARRDAGADHRSARGRACAVRARRRRARGGRRARQL RQVVPADRTHAERVRDRRGRRQDGRPITTLAQGDRHVSRHFLVRRRPSMRAPPPARRRVDSRRADARGADRLRRPRAGSR QALRDAQRAAEQRGRVRARRGAGSDGCHQSVRAGGGRHHRRPPQLRVVRAVSGSDADELERHVQRFAEQSVSTEERDRVA FVDQVREVHDIAHGHRQLVHPDAQPGAGRDRGERVGVRDGRGDRRRRADHLRDSGVHLQGRHADEPARGRRDLQHRRLAL REDGLAAVVRRGQLRLVGARRLEQRVVDRQRADGQLLRAARHRLAGRHARRQGGDDQRVQHALRHLRESVQEPVVRHARL HRLRLRRDHMALAEQRVFGLRQQAPGVRELSGRPDHRHQHGRLVQPELLRGGRRPQARARARGGLLGAAERPQRARALVG LRADARPDGLRRQRDARASRVPRLVDRARQPVRDARHAGQRQLGRPAGARAAPMNTRRRETIMNRFSLPPRPSRMRGAVA VEFAIVMIPLVLLATGVAEFGRAIYQYEALTKATRDAARYLSTYLPTDPAYPLAQAQCLAVYGSTTCGSTGSELAPGLAT SMVIVCDAAHAPDCSDSSDPAQFANVPTYDTNNGSPDPASLAGSMNLVEVKIKGYQYRPIPAFPGLPNLSFGNIVTVMRQ VS
Sequences:
>Translated_722_residues MQGDVHEPRLLHADAPPRARRVARRLARRLHVQHARLGRPLRRFGARRDAGADHRSARGRACAVRARRRRARGGRRARQL RQVVPADRTHAERVRDRRGRRQDGRPITTLAQGDRHVSRHFLVRRRPSMRAPPPARRRVDSRRADARGADRLRRPRAGSR QALRDAQRAAEQRGRVRARRGAGSDGCHQSVRAGGGRHHRRPPQLRVVRAVSGSDADELERHVQRFAEQSVSTEERDRVA FVDQVREVHDIAHGHRQLVHPDAQPGAGRDRGERVGVRDGRGDRRRRADHLRDSGVHLQGRHADEPARGRRDLQHRRLAL REDGLAAVVRRGQLRLVGARRLEQRVVDRQRADGQLLRAARHRLAGRHARRQGGDDQRVQHALRHLRESVQEPVVRHARL HRLRLRRDHMALAEQRVFGLRQQAPGVRELSGRPDHRHQHGRLVQPELLRGGRRPQARARARGGLLGAAERPQRARALVG LRADARPDGLRRQRDARASRVPRLVDRARQPVRDARHAGQRQLGRPAGARAAPMNTRRRETIMNRFSLPPRPSRMRGAVA VEFAIVMIPLVLLATGVAEFGRAIYQYEALTKATRDAARYLSTYLPTDPAYPLAQAQCLAVYGSTTCGSTGSELAPGLAT SMVIVCDAAHAPDCSDSSDPAQFANVPTYDTNNGSPDPASLAGSMNLVEVKIKGYQYRPIPAFPGLPNLSFGNIVTVMRQ VS >Mature_722_residues MQGDVHEPRLLHADAPPRARRVARRLARRLHVQHARLGRPLRRFGARRDAGADHRSARGRACAVRARRRRARGGRRARQL RQVVPADRTHAERVRDRRGRRQDGRPITTLAQGDRHVSRHFLVRRRPSMRAPPPARRRVDSRRADARGADRLRRPRAGSR QALRDAQRAAEQRGRVRARRGAGSDGCHQSVRAGGGRHHRRPPQLRVVRAVSGSDADELERHVQRFAEQSVSTEERDRVA FVDQVREVHDIAHGHRQLVHPDAQPGAGRDRGERVGVRDGRGDRRRRADHLRDSGVHLQGRHADEPARGRRDLQHRRLAL REDGLAAVVRRGQLRLVGARRLEQRVVDRQRADGQLLRAARHRLAGRHARRQGGDDQRVQHALRHLRESVQEPVVRHARL HRLRLRRDHMALAEQRVFGLRQQAPGVRELSGRPDHRHQHGRLVQPELLRGGRRPQARARARGGLLGAAERPQRARALVG LRADARPDGLRRQRDARASRVPRLVDRARQPVRDARHAGQRQLGRPAGARAAPMNTRRRETIMNRFSLPPRPSRMRGAVA VEFAIVMIPLVLLATGVAEFGRAIYQYEALTKATRDAARYLSTYLPTDPAYPLAQAQCLAVYGSTTCGSTGSELAPGLAT SMVIVCDAAHAPDCSDSSDPAQFANVPTYDTNNGSPDPASLAGSMNLVEVKIKGYQYRPIPAFPGLPNLSFGNIVTVMRQ VS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81107; Mature: 81107
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGDVHEPRLLHADAPPRARRVARRLARRLHVQHARLGRPLRRFGARRDAGADHRSARGR CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHCCCH ACAVRARRRRARGGRRARQLRQVVPADRTHAERVRDRRGRRQDGRPITTLAQGDRHVSRH HHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHH FLVRRRPSMRAPPPARRRVDSRRADARGADRLRRPRAGSRQALRDAQRAAEQRGRVRARR HHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC GAGSDGCHQSVRAGGGRHHRRPPQLRVVRAVSGSDADELERHVQRFAEQSVSTEERDRVA CCCCHHHHHHHHCCCCCCCCCCCHHEEEEHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH FVDQVREVHDIAHGHRQLVHPDAQPGAGRDRGERVGVRDGRGDRRRRADHLRDSGVHLQG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEC RHADEPARGRRDLQHRRLALREDGLAAVVRRGQLRLVGARRLEQRVVDRQRADGQLLRAA CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHH RHRLAGRHARRQGGDDQRVQHALRHLRESVQEPVVRHARLHRLRLRRDHMALAEQRVFGL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQAPGVRELSGRPDHRHQHGRLVQPELLRGGRRPQARARARGGLLGAAERPQRARALVG HHHCCCHHHHCCCCCCHHCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHH LRADARPDGLRRQRDARASRVPRLVDRARQPVRDARHAGQRQLGRPAGARAAPMNTRRRE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH TIMNRFSLPPRPSRMRGAVAVEFAIVMIPLVLLATGVAEFGRAIYQYEALTKATRDAARY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTYLPTDPAYPLAQAQCLAVYGSTTCGSTGSELAPGLATSMVIVCDAAHAPDCSDSSDP HHHHCCCCCCCCHHHHHHHHEECCCCCCCCCHHHCCHHHHCEEEEEECCCCCCCCCCCCC AQFANVPTYDTNNGSPDPASLAGSMNLVEVKIKGYQYRPIPAFPGLPNLSFGNIVTVMRQ HHHCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHH VS CC >Mature Secondary Structure MQGDVHEPRLLHADAPPRARRVARRLARRLHVQHARLGRPLRRFGARRDAGADHRSARGR CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHCCCH ACAVRARRRRARGGRRARQLRQVVPADRTHAERVRDRRGRRQDGRPITTLAQGDRHVSRH HHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHH FLVRRRPSMRAPPPARRRVDSRRADARGADRLRRPRAGSRQALRDAQRAAEQRGRVRARR HHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC GAGSDGCHQSVRAGGGRHHRRPPQLRVVRAVSGSDADELERHVQRFAEQSVSTEERDRVA CCCCHHHHHHHHCCCCCCCCCCCHHEEEEHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH FVDQVREVHDIAHGHRQLVHPDAQPGAGRDRGERVGVRDGRGDRRRRADHLRDSGVHLQG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEC RHADEPARGRRDLQHRRLALREDGLAAVVRRGQLRLVGARRLEQRVVDRQRADGQLLRAA CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHH RHRLAGRHARRQGGDDQRVQHALRHLRESVQEPVVRHARLHRLRLRRDHMALAEQRVFGL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQAPGVRELSGRPDHRHQHGRLVQPELLRGGRRPQARARARGGLLGAAERPQRARALVG HHHCCCHHHHCCCCCCHHCCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHH LRADARPDGLRRQRDARASRVPRLVDRARQPVRDARHAGQRQLGRPAGARAAPMNTRRRE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH TIMNRFSLPPRPSRMRGAVAVEFAIVMIPLVLLATGVAEFGRAIYQYEALTKATRDAARY HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTYLPTDPAYPLAQAQCLAVYGSTTCGSTGSELAPGLATSMVIVCDAAHAPDCSDSSDP HHHHCCCCCCCCHHHHHHHHEECCCCCCCCCHHHCCHHHHCEEEEEECCCCCCCCCCCCC AQFANVPTYDTNNGSPDPASLAGSMNLVEVKIKGYQYRPIPAFPGLPNLSFGNIVTVMRQ HHHCCCCCCCCCCCCCCHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHH VS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA