| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is syrB2
Identifier: 76818046
GI number: 76818046
Start: 195125
End: 196189
Strand: Direct
Name: syrB2
Synonym: BURPS1710b_A0147
Alternate gene names: NA
Gene position: 195125-196189 (Clockwise)
Preceding gene: 76817356
Following gene: 76818841
Centisome position: 6.13
GC content: 64.79
Gene sequence:
>1065_bases GTGACGAGCGACGCGGCGCAGCGGCGCGCGGCGGCATGCCCGCGCGTCGCGCCGGCGCCGGCCGCTCGACACGCGCACGA GCGCAAGCACAAGCACGAACAGGCCGAACGAGCCACAACCAGGATCCAGAGGAACAACACCATGTCGCAATTCAAGCTGA CGCCCGACGAAATCGCCCGCTTCCGCGAGCAGGGCTACATCGGACCGTTCAAACTCTATTCGGAGGACGAAGCGCGCGAG CGCTACCGGCAGATCCGCGCGCAACTGTTCGACCGCGAATACGCGATCTACGAGTTGCCGCCGAACAGCCCGATCGCGAA CTACGACCGGCATCTGGACGTGAATCTGCTGAGCGAGCACATCATGCGCGCGGAGATCGTCCACAAGCTCAATGCGATCC TGGGCCCGGACCTCATCTGCTGGCGCTCGGAGATGTTCCCGAAATACCCCGGCGACGAAGGCACCGACTGGCACCAGGCC GACACGTTCGCGCACGCGTCGGGCAAGCCGCAGGTGGTGTGGCCCGGCGACGGCCGCTTCGGCGGCGCGGTGACGGTGTG GACCGCGTTCACCGATTGCGACGAAGAAAACGGCTGCCTGCGCTTCATGCCCGGCACGCATGAGGAAATGTTCTACGACG AATCGAAGAAGATGACCTTCGATCCGTCGAACATCAACGCGCTCGAGAAGGACGGCATCAAGCGCGGCTTCTTCGGCTAC GACTACCGCAGCCTGCAGAAGGACCCGGACTGGAAGCCGGACGAGCGCAACGCGGTGTCGATCAAGATGAAGCCGGGCGA GTTCGTGATCTTCTGGTCGACGCTGATGCACTCGTCGTTCCCGAACTCGACGAAGGATCGCACCCGCCTCGGCTACGCAT GCCGATACGTGCCCGCGGCGGTCCAGATCTATCCGGATACCGATACCGTCAGCGAATACGGCAGCGAAGTGAAGCTCGAC AAGTACGGCGTCGTGCTCGTATCGGGCGAGGACGGCTTCCGGCACAACCGCCGGGTCGAACGCAACGCGCGCGGCGTGCC GTTCGTGCGCCACGCCGGCGCGTAA
Upstream 100 bases:
>100_bases AGATCGAGCAGCTGGTGCAGCGCCAGGTGCCGACGAGCAAGCTGATGGCGGCGCCTACCGTTCAAGGGTGGTCGCAGGTT TATCGGGAGGCCGCCGCGTC
Downstream 100 bases:
>100_bases TCCGGCGCGAGCCCGGCCCGGCCGCGGCGCGAAGACGGAAAACCGCCCACGGGGAGCCGCCGCTCCCCGTTTTTTCTTCG GAGGAAGACCATGACGCCCC
Product: CmaB
Products: NA
Alternate protein names: Phytanoyl-CoA Dioxygenase; CmaB Protein; Non-Haem Iron Halogenase; Coronamic Acid Synthetase; Coronamic Acid Synthetase Chlorinating Component; Coronamic Acid Synthetase CmaB; Phytanoyl-CoA Dioxygenase Family Protein; Non-Ribosomal Peptide Synthase Related Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTSDAAQRRAAACPRVAPAPAARHAHERKHKHEQAERATTRIQRNNTMSQFKLTPDEIARFREQGYIGPFKLYSEDEARE RYRQIRAQLFDREYAIYELPPNSPIANYDRHLDVNLLSEHIMRAEIVHKLNAILGPDLICWRSEMFPKYPGDEGTDWHQA DTFAHASGKPQVVWPGDGRFGGAVTVWTAFTDCDEENGCLRFMPGTHEEMFYDESKKMTFDPSNINALEKDGIKRGFFGY DYRSLQKDPDWKPDERNAVSIKMKPGEFVIFWSTLMHSSFPNSTKDRTRLGYACRYVPAAVQIYPDTDTVSEYGSEVKLD KYGVVLVSGEDGFRHNRRVERNARGVPFVRHAGA
Sequences:
>Translated_354_residues MTSDAAQRRAAACPRVAPAPAARHAHERKHKHEQAERATTRIQRNNTMSQFKLTPDEIARFREQGYIGPFKLYSEDEARE RYRQIRAQLFDREYAIYELPPNSPIANYDRHLDVNLLSEHIMRAEIVHKLNAILGPDLICWRSEMFPKYPGDEGTDWHQA DTFAHASGKPQVVWPGDGRFGGAVTVWTAFTDCDEENGCLRFMPGTHEEMFYDESKKMTFDPSNINALEKDGIKRGFFGY DYRSLQKDPDWKPDERNAVSIKMKPGEFVIFWSTLMHSSFPNSTKDRTRLGYACRYVPAAVQIYPDTDTVSEYGSEVKLD KYGVVLVSGEDGFRHNRRVERNARGVPFVRHAGA >Mature_353_residues TSDAAQRRAAACPRVAPAPAARHAHERKHKHEQAERATTRIQRNNTMSQFKLTPDEIARFREQGYIGPFKLYSEDEARER YRQIRAQLFDREYAIYELPPNSPIANYDRHLDVNLLSEHIMRAEIVHKLNAILGPDLICWRSEMFPKYPGDEGTDWHQAD TFAHASGKPQVVWPGDGRFGGAVTVWTAFTDCDEENGCLRFMPGTHEEMFYDESKKMTFDPSNINALEKDGIKRGFFGYD YRSLQKDPDWKPDERNAVSIKMKPGEFVIFWSTLMHSSFPNSTKDRTRLGYACRYVPAAVQIYPDTDTVSEYGSEVKLDK YGVVLVSGEDGFRHNRRVERNARGVPFVRHAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40658; Mature: 40527
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDAAQRRAAACPRVAPAPAARHAHERKHKHEQAERATTRIQRNNTMSQFKLTPDEIAR CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHH FREQGYIGPFKLYSEDEARERYRQIRAQLFDREYAIYELPPNSPIANYDRHLDVNLLSEH HHHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHH IMRAEIVHKLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHASGKPQVVWPGDGRF HHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCHHHHEECCCCCCEEEECCCCCC GGAVTVWTAFTDCDEENGCLRFMPGTHEEMFYDESKKMTFDPSNINALEKDGIKRGFFGY CCEEEEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCEEECCCCCCHHHHCCCCCCCCCC DYRSLQKDPDWKPDERNAVSIKMKPGEFVIFWSTLMHSSFPNSTKDRTRLGYACRYVPAA CHHHHCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHEECCEE VQIYPDTDTVSEYGSEVKLDKYGVVLVSGEDGFRHNRRVERNARGVPFVRHAGA EEEECCCHHHHHCCCEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure TSDAAQRRAAACPRVAPAPAARHAHERKHKHEQAERATTRIQRNNTMSQFKLTPDEIAR CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHH FREQGYIGPFKLYSEDEARERYRQIRAQLFDREYAIYELPPNSPIANYDRHLDVNLLSEH HHHCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHH IMRAEIVHKLNAILGPDLICWRSEMFPKYPGDEGTDWHQADTFAHASGKPQVVWPGDGRF HHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCHHHHEECCCCCCEEEECCCCCC GGAVTVWTAFTDCDEENGCLRFMPGTHEEMFYDESKKMTFDPSNINALEKDGIKRGFFGY CCEEEEEEEEECCCCCCCEEEECCCCCHHHHHCCCCCEEECCCCCCHHHHCCCCCCCCCC DYRSLQKDPDWKPDERNAVSIKMKPGEFVIFWSTLMHSSFPNSTKDRTRLGYACRYVPAA CHHHHCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHEECCEE VQIYPDTDTVSEYGSEVKLDKYGVVLVSGEDGFRHNRRVERNARGVPFVRHAGA EEEECCCHHHHHCCCEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA