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The map label for this gene is yadE [C]

Identifier: 76818012

GI number: 76818012

Start: 1292787

End: 1294640

Strand: Direct

Name: yadE [C]

Synonym: BURPS1710b_A1030

Alternate gene names: 76818012

Gene position: 1292787-1294640 (Clockwise)

Preceding gene: 76819103

Following gene: 76818795

Centisome position: 40.63

GC content: 68.93

Gene sequence:

>1854_bases
ATGTGTGCGAATCCCATCATCTCTCCTGACCCGTATAACCGATCGCTCGTCGAACCCCGGAAGCGTCGGCGGTTTTTGTC
GGCAGCCCTGAACGACGGGCCGTCGTGCCGTTCCTGGATAGCGGCAGCCTTCGCGCAAACGTTTAGCGGTAAACGAACTT
TTTTAATAAGGGTCGCCAGCGCATATCATGGAACCGATCCGCCCACGAGAAAAAAACCTCGAAAAACGCCGAGCGGCGCG
GCATCTTCCTGGCGAGACGCCCTCGGCGAATTCCGCTTCGCGCGGCGGCTCGCGCCGATCCGCGCGGCCAACGCATGCCG
GTTCGGCGTCTGTCGATCGAGTCAACGGGAATGCCTCGCGCGCAACGAAAGACGAGAAATCGATCAGGATTCCGTTTCGA
TTTCATCGCGCCATTTCGTTTCGCGCGCATCGAATGGAAGACGGCCGGCGGCGAACATTCGACCCGCGCCAAGCACGCGC
TCGATCGCCGGCGCGCGCGTGCGCAATGCATCGCGCGCACCGAACGGAACCGGCCGCCGAGGAAGATCGAGCGCGCGACG
GCGCATGTCCGAACCCGCGGCACGTTCGCCGCCCGCCCGCGAAGCGGGCGACGCCGGCCGCGCGAACGCCGCGGCACCGC
GCCGCCGAGAGCGGCCCGCATCGGCGATATGCAACACACGAACGCGCGCCGGCTTGACGTACATCAACGATCGTGCGTGC
GACGCCGCACCGCAGCGGCGCCGTCCGCCTATAGTGGCGCCCTGCACTGGTGCGGCTGCGTTGACTTGGCTCAACGCACG
CGGGCATGCGCGGCGCATGCTAGTGCATACATGCTTCGCATGCTGCTCAAGAGGCTCGCCAGCCCGTTCGTCCGACGCCG
CCCGACAGGCACGCCGATGTGCCGACAGCACCGTGACGCGCGCGCCGGGAACGACGCTCGCGGCCCGCCTCCGATCGCAG
CCTGCGTGCAGCCGGCGCAACGCCGGCCCCGACAACTCAGCGACGCACACCATCATGTCATTTCGTTCCCGGTTCACCTG
GCGCACGGCCGTTTTCGGCCCCGGCTTTCGGCCCGTCTCGCGGATCGTCGCTACCACTGCGTCGAGCGGCGCGCCCGCCG
TCGCCGCGCCGCCGACCGACGTCGCCGTGCTCGTCTATCACCGTTTCTCGAACGTCTGCGGCGCCGATCCGATGACGGTC
GGCGTCGCGACATTCGAAGCGCAACTCGCGCACCTGCGCCGGCTCGGCTACCGGTTCGTCCCGCTACGCGACGTGATCGG
CTGGCTGCGCGGCGAGCCCGTCGCGCTGCCGTCGAAGGCGATCGCGCTGACGATCGACGAAGGGCACGCATCGATCTTCG
ACTGGGCCCGCACGGTCGCGCTGCGCGAGCGGGTGCCGATCACGCTGTTCGTCTATCCGTCCGCGATCGGCGAGGCGCCC
GGCGCGCTCACGTGGCACCAGTTGCGCGTGCTGCACAAGACCGGCTGGTTCGACGTGCAATCGCACGCGTGGTGGCATCC
CGATCTGAACGCCGCGCACCGGCCGCCTTCCGGCGCGTTTCGCGAGGCGACGCGCGCGCAGTTCGCGCAGGCGCGCGCAC
GCATCGCGCGCGAGATCGGCAACCAGGTCGATCTGCTCGCCTGGCCGTTCGGCGCGTTCGACGGCGAACTCGGCGCGGCC
GCGCGCGAAGCCGGCTACGTCGCGGGCTTCACGCTCGAGCCGAGCAAGATCCGGCGCGACACGCCGCTGCTCACGCTGCC
GCGGTTCCTGATGGTCGAGGAATGCACGCCGGCCGTGCTGCGGCGATTGCTCTCGAAGAGCGACGCGGCACGCGAGGAAG
CGGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
GCCTTCGAACTTCGCCATCCTGTCCAGTGCGAACGCGATCATCACCGCAAGCAGACAGGCGACCAGCGCGAAGCCGATCC
CGAGGCGGGTGGCGACCTTC

Downstream 100 bases:

>100_bases
GCGCCGGCGCGGCGGCCGCCCGCGCCGGGCAGCGTCAGGGTTGCCGCGCGCCGCCCCACCCGCCGCCGAGCGCCGCGTAC
AGCGCGACCGTGTCCTGCAG

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Pda4D

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MCANPIISPDPYNRSLVEPRKRRRFLSAALNDGPSCRSWIAAAFAQTFSGKRTFLIRVASAYHGTDPPTRKKPRKTPSGA
ASSWRDALGEFRFARRLAPIRAANACRFGVCRSSQRECLARNERREIDQDSVSISSRHFVSRASNGRRPAANIRPAPSTR
SIAGARVRNASRAPNGTGRRGRSSARRRMSEPAARSPPAREAGDAGRANAAAPRRRERPASAICNTRTRAGLTYINDRAC
DAAPQRRRPPIVAPCTGAAALTWLNARGHARRMLVHTCFACCSRGSPARSSDAARQARRCADSTVTRAPGTTLAARLRSQ
PACSRRNAGPDNSATHTIMSFRSRFTWRTAVFGPGFRPVSRIVATTASSGAPAVAAPPTDVAVLVYHRFSNVCGADPMTV
GVATFEAQLAHLRRLGYRFVPLRDVIGWLRGEPVALPSKAIALTIDEGHASIFDWARTVALRERVPITLFVYPSAIGEAP
GALTWHQLRVLHKTGWFDVQSHAWWHPDLNAAHRPPSGAFREATRAQFAQARARIAREIGNQVDLLAWPFGAFDGELGAA
AREAGYVAGFTLEPSKIRRDTPLLTLPRFLMVEECTPAVLRRLLSKSDAAREEAARR

Sequences:

>Translated_617_residues
MCANPIISPDPYNRSLVEPRKRRRFLSAALNDGPSCRSWIAAAFAQTFSGKRTFLIRVASAYHGTDPPTRKKPRKTPSGA
ASSWRDALGEFRFARRLAPIRAANACRFGVCRSSQRECLARNERREIDQDSVSISSRHFVSRASNGRRPAANIRPAPSTR
SIAGARVRNASRAPNGTGRRGRSSARRRMSEPAARSPPAREAGDAGRANAAAPRRRERPASAICNTRTRAGLTYINDRAC
DAAPQRRRPPIVAPCTGAAALTWLNARGHARRMLVHTCFACCSRGSPARSSDAARQARRCADSTVTRAPGTTLAARLRSQ
PACSRRNAGPDNSATHTIMSFRSRFTWRTAVFGPGFRPVSRIVATTASSGAPAVAAPPTDVAVLVYHRFSNVCGADPMTV
GVATFEAQLAHLRRLGYRFVPLRDVIGWLRGEPVALPSKAIALTIDEGHASIFDWARTVALRERVPITLFVYPSAIGEAP
GALTWHQLRVLHKTGWFDVQSHAWWHPDLNAAHRPPSGAFREATRAQFAQARARIAREIGNQVDLLAWPFGAFDGELGAA
AREAGYVAGFTLEPSKIRRDTPLLTLPRFLMVEECTPAVLRRLLSKSDAAREEAARR
>Mature_617_residues
MCANPIISPDPYNRSLVEPRKRRRFLSAALNDGPSCRSWIAAAFAQTFSGKRTFLIRVASAYHGTDPPTRKKPRKTPSGA
ASSWRDALGEFRFARRLAPIRAANACRFGVCRSSQRECLARNERREIDQDSVSISSRHFVSRASNGRRPAANIRPAPSTR
SIAGARVRNASRAPNGTGRRGRSSARRRMSEPAARSPPAREAGDAGRANAAAPRRRERPASAICNTRTRAGLTYINDRAC
DAAPQRRRPPIVAPCTGAAALTWLNARGHARRMLVHTCFACCSRGSPARSSDAARQARRCADSTVTRAPGTTLAARLRSQ
PACSRRNAGPDNSATHTIMSFRSRFTWRTAVFGPGFRPVSRIVATTASSGAPAVAAPPTDVAVLVYHRFSNVCGADPMTV
GVATFEAQLAHLRRLGYRFVPLRDVIGWLRGEPVALPSKAIALTIDEGHASIFDWARTVALRERVPITLFVYPSAIGEAP
GALTWHQLRVLHKTGWFDVQSHAWWHPDLNAAHRPPSGAFREATRAQFAQARARIAREIGNQVDLLAWPFGAFDGELGAA
AREAGYVAGFTLEPSKIRRDTPLLTLPRFLMVEECTPAVLRRLLSKSDAAREEAARR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=250, Percent_Identity=27.6, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67456; Mature: 67456

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCANPIISPDPYNRSLVEPRKRRRFLSAALNDGPSCRSWIAAAFAQTFSGKRTFLIRVAS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEH
AYHGTDPPTRKKPRKTPSGAASSWRDALGEFRFARRLAPIRAANACRFGVCRSSQRECLA
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
RNERREIDQDSVSISSRHFVSRASNGRRPAANIRPAPSTRSIAGARVRNASRAPNGTGRR
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GRSSARRRMSEPAARSPPAREAGDAGRANAAAPRRRERPASAICNTRTRAGLTYINDRAC
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCHHHCCCEEECCCCC
DAAPQRRRPPIVAPCTGAAALTWLNARGHARRMLVHTCFACCSRGSPARSSDAARQARRC
CCCCHHCCCCEEECCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ADSTVTRAPGTTLAARLRSQPACSRRNAGPDNSATHTIMSFRSRFTWRTAVFGPGFRPVS
HHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHH
RIVATTASSGAPAVAAPPTDVAVLVYHRFSNVCGADPMTVGVATFEAQLAHLRRLGYRFV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PLRDVIGWLRGEPVALPSKAIALTIDEGHASIFDWARTVALRERVPITLFVYPSAIGEAP
CHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCC
GALTWHQLRVLHKTGWFDVQSHAWWHPDLNAAHRPPSGAFREATRAQFAQARARIAREIG
CCCHHHHHHHHHHCCCEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NQVDLLAWPFGAFDGELGAAAREAGYVAGFTLEPSKIRRDTPLLTLPRFLMVEECTPAVL
CCEEEEEECCCCCCCCHHHHHHHCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHCCHHHH
RRLLSKSDAAREEAARR
HHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MCANPIISPDPYNRSLVEPRKRRRFLSAALNDGPSCRSWIAAAFAQTFSGKRTFLIRVAS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEH
AYHGTDPPTRKKPRKTPSGAASSWRDALGEFRFARRLAPIRAANACRFGVCRSSQRECLA
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
RNERREIDQDSVSISSRHFVSRASNGRRPAANIRPAPSTRSIAGARVRNASRAPNGTGRR
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GRSSARRRMSEPAARSPPAREAGDAGRANAAAPRRRERPASAICNTRTRAGLTYINDRAC
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCHHHCCCEEECCCCC
DAAPQRRRPPIVAPCTGAAALTWLNARGHARRMLVHTCFACCSRGSPARSSDAARQARRC
CCCCHHCCCCEEECCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ADSTVTRAPGTTLAARLRSQPACSRRNAGPDNSATHTIMSFRSRFTWRTAVFGPGFRPVS
HHHHHCCCCCHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHH
RIVATTASSGAPAVAAPPTDVAVLVYHRFSNVCGADPMTVGVATFEAQLAHLRRLGYRFV
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PLRDVIGWLRGEPVALPSKAIALTIDEGHASIFDWARTVALRERVPITLFVYPSAIGEAP
CHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCC
GALTWHQLRVLHKTGWFDVQSHAWWHPDLNAAHRPPSGAFREATRAQFAQARARIAREIG
CCCHHHHHHHHHHCCCEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NQVDLLAWPFGAFDGELGAAAREAGYVAGFTLEPSKIRRDTPLLTLPRFLMVEECTPAVL
CCEEEEEECCCCCCCCHHHHHHHCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHCCHHHH
RRLLSKSDAAREEAARR
HHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA