| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is olpB [H]
Identifier: 76817637
GI number: 76817637
Start: 1967052
End: 1969628
Strand: Direct
Name: olpB [H]
Synonym: BURPS1710b_A1613
Alternate gene names: 76817637
Gene position: 1967052-1969628 (Clockwise)
Preceding gene: 76818362
Following gene: 76819204
Centisome position: 61.82
GC content: 64.73
Gene sequence:
>2577_bases ATGCCAAACCATTTTTCGAACGGACGGACGAATCAAAGCCGCACGGTAGTGATCCGCAGCGGTGCGATGCCGCGGCTGCT CGGTCAGCCCGCGCTCGAGTTCCTGTCGCTGCGCGGTGAAGAGCACCTCGGAAAACTCTACACGTACGAATTGCTCCTGC GCACGCCGGACGATTTTCATGTGCCGTTGGCAACGAGCGCGAATCTCGACCTGAAGGCGATGATCGGCACGGAGATGACG GTCTGCATTCAGCTCGACGGAATCGGGACGGGCGCGCAAGGCGGCGTTGGCGCGGGTGCGCGCGAAATCAGCGGGCTCGT GGTCAAGGCGGGCTTCCTGCGCTGCGAGGGGCGCTATAACGTCTATCGCATCGAGCTGCGCCCCTGGCTGTGGCTCGCGA CTTTGACGAGCGACTACAAGATTTTTCAGGACAAGAGCGTCGTCGAAATCATCGATACGGTCTTGCACGATTACCCTTAC CCGGTCGAGAAGCGGCTCGACATCGACAAGTATTCGGTGGCGGGCGAGAGCGCTCGAAACGAGCCGCGCGCGTTCCAGGT GCAATATGGCGAAACCGATTTCGACTTCGTTCAGCGTTTGATGGAGGAGTGGGGGATCTACTGGTTCTTCGAGCATTCGG ACAACAAGCATCGCCTGGTCTTGTGCGATCACATCGGCGGACATCGCAAGGCGCCGAGCGAGGCCTATCACGAGATCGCG CATCACCCGGAAGGCGGGAAGATCGACATCGAGTACATCAACTATTTCTCGACGGACGAAGCGCTGCGGCCCGGCCGCGT CGTGATAGACGATTTCGACTTCACGCGTCCGCTCGCGAGCCTCGTCACGTCCAATCACCAGCCGCGGGAGACGAACTGGG GGGAGGGCGAGCTGTTCGAATGGCCGGGCGACTATACCGATAGCAAGCATGGCGATCTCATCAGCCGCGTGCGCATGGAA GAGCGCCGCGCGACCGGGTCGCGCGCATACGGTCGGGGCAACGTGCGCGGCCTCGCCTGCGGTCATACGTTCGTGCTGTC GAAGCACAAGCACGACGGCGCGAACCGCGAGTACCTCGTCATCGAATCGGCGTTGATGCTGACCGAAGTCGCGGACGAAA CGGGCAGCGGCTACCGCTACGAATGCGATAACGAACTGGTCGTGCAGCCGTCGAACGAGGTGTTTCGAATGCCGCGCGAA ACGCCCAAGCCGACGACGAGCGGGCCACAGTCCGCGATCGTGGTCGGGCCGCCGGGCCACGAGGTATGGACCGACGAATT CGGCCGCGTGAAGATCCGTTTTCTGTGGGATCGCTACGCACGCAATGACGCAACGGATTCCTGCTGGGTACGCGTGAGCC AGGCGTGGGCCGGCGTGAACTTCGGCGGCATCTACATTCCGCGGATCGGACAGGAAGTGATCGTCGGATTCATGAACGGC GATCCGGACCGTCCGCTGATTCTCGGCAGCCTCTACAACACCATTACGCCGCCGCCTTGGGATCTGCCCGGCGACGCGAC GAAGAGCGGATTCAAGAGCAAGTCGATCACGGGCGGGCGCGAGAACTATAACGGCATCCGCTTCGAGGACAAGCTGGGGG CCGAGGAATTTCACATGCAGGCGGAAAAGGACATGAACCGCCTGACGAAGAACGACGAGTCGCATACGGTCGGCGCGAAT TTTTCGATCGGCGTCGGGCTTACCCATACGCGCGCGGTGGGCGCCATGTTCAGCAGCATCGTCGGCGGAGCCGCCAGCTA TGCGGTGGGGGGCGCGGAATCGACGATGATCGGCGGCGCGTATGCGTTGAACGTCGGCGGCGCGCACGCGGTTGCGGTGG GCGGCGCGTCGTCCGTTTCCGTTGGCGGCGCCTACGCGCGCAACGTGGGCGGCGCGTATGCGCTGACAGTCGGCGGCGTG CTGTCGATCGTCTGCGGTGCGTCTTCGATCACCATGACGGCTTGCGGCTCGATCAAGATCGTCGGCAAGAATATTCGCAT CATCGGCAGCGACGAAGTCGTCGTGCAAGGCGCGCCCCTGCAACTGAATCCGGGCGATTCGGATTGCGGCGGAGGGGGCG GCGGCGGCGGCGGCGGCGGCGCGATTCCGCCGATTCCGTTGCCGTCGTTCTTCCTCGATATCACGAAGCCGATTCTTCCG CCGCCGCCGCCGCCACCGACGGAGGTGCCACCGGATCCGACGCCGACGCCAACGCCGACGCCCACGCCCACGCCCACGCC CACGCCAACGCCAACGCCAACGCCAACGCCAACGCCGACGCCAACGCCAACGCCGACGCCGACGCCGACGCCGACGCCGA CGCCGACGCCGACGCCCACGCCCACGCCCACGCCAACGCCAACGCCAACGCCAACGCCAACGCCCACGCCGACGCCCACG CCCACGCCCACGCCCACGCCGACGCCCACGCCGACGCCAACGCCCACGCCAACGCCAACGCCAACGCCGACGCCGACGCC AACGCCAACGCCGACGCCAACGCCGACGCCCACGCCGACGCCAACACCAACACCAACACCAACACCAACACCAACTCCGA CTAGTTCCGAGATTTAA
Upstream 100 bases:
>100_bases TGAGCGGTGATCGAATCGGGCCGGAAGCGGGCGGCGCCTCGGCGCGGGCGCGCTTCGGGCCGGACATTTGTTTTAAGGTA AGTGGAAGCGAGAAGACTGC
Downstream 100 bases:
>100_bases GCAATGCCCACTGGCGCCATGTAAGGCGCCAACATTCAGAGGTTCACCAAGTCATTCATCGGAGAGTTTTGAACATGACA ATCCCGGCAGCAAGAGTGGG
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Outer layer protein B; S-layer protein 1 [H]
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MPNHFSNGRTNQSRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVPLATSANLDLKAMIGTEMT VCIQLDGIGTGAQGGVGAGAREISGLVVKAGFLRCEGRYNVYRIELRPWLWLATLTSDYKIFQDKSVVEIIDTVLHDYPY PVEKRLDIDKYSVAGESARNEPRAFQVQYGETDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIA HHPEGGKIDIEYINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHGDLISRVRME ERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVADETGSGYRYECDNELVVQPSNEVFRMPRE TPKPTTSGPQSAIVVGPPGHEVWTDEFGRVKIRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNG DPDRPLILGSLYNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKNDESHTVGAN FSIGVGLTHTRAVGAMFSSIVGGAASYAVGGAESTMIGGAYALNVGGAHAVAVGGASSVSVGGAYARNVGGAYALTVGGV LSIVCGASSITMTACGSIKIVGKNIRIIGSDEVVVQGAPLQLNPGDSDCGGGGGGGGGGGAIPPIPLPSFFLDITKPILP PPPPPPTEVPPDPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTSSEI
Sequences:
>Translated_858_residues MPNHFSNGRTNQSRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVPLATSANLDLKAMIGTEMT VCIQLDGIGTGAQGGVGAGAREISGLVVKAGFLRCEGRYNVYRIELRPWLWLATLTSDYKIFQDKSVVEIIDTVLHDYPY PVEKRLDIDKYSVAGESARNEPRAFQVQYGETDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIA HHPEGGKIDIEYINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHGDLISRVRME ERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVADETGSGYRYECDNELVVQPSNEVFRMPRE TPKPTTSGPQSAIVVGPPGHEVWTDEFGRVKIRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNG DPDRPLILGSLYNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKNDESHTVGAN FSIGVGLTHTRAVGAMFSSIVGGAASYAVGGAESTMIGGAYALNVGGAHAVAVGGASSVSVGGAYARNVGGAYALTVGGV LSIVCGASSITMTACGSIKIVGKNIRIIGSDEVVVQGAPLQLNPGDSDCGGGGGGGGGGGAIPPIPLPSFFLDITKPILP PPPPPPTEVPPDPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTSSEI >Mature_857_residues PNHFSNGRTNQSRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVPLATSANLDLKAMIGTEMTV CIQLDGIGTGAQGGVGAGAREISGLVVKAGFLRCEGRYNVYRIELRPWLWLATLTSDYKIFQDKSVVEIIDTVLHDYPYP VEKRLDIDKYSVAGESARNEPRAFQVQYGETDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIAH HPEGGKIDIEYINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFEWPGDYTDSKHGDLISRVRMEE RRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALMLTEVADETGSGYRYECDNELVVQPSNEVFRMPRET PKPTTSGPQSAIVVGPPGHEVWTDEFGRVKIRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGD PDRPLILGSLYNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKNDESHTVGANF SIGVGLTHTRAVGAMFSSIVGGAASYAVGGAESTMIGGAYALNVGGAHAVAVGGASSVSVGGAYARNVGGAYALTVGGVL SIVCGASSITMTACGSIKIVGKNIRIIGSDEVVVQGAPLQLNPGDSDCGGGGGGGGGGGAIPPIPLPSFFLDITKPILPP PPPPPTEVPPDPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTP TPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTSSEI
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall, S-layer [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 SLH (S-layer homology) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR002102 - InterPro: IPR018452 - InterPro: IPR001119 [H]
Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]
EC number: NA
Molecular weight: Translated: 91983; Mature: 91852
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNHFSNGRTNQSRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFH CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHEEEEEEEEECCCCCE VPLATSANLDLKAMIGTEMTVCIQLDGIGTGAQGGVGAGAREISGLVVKAGFLRCEGRYN EEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCC VYRIELRPWLWLATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARN EEEEEECCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCC EPRAFQVQYGETDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIA CCCEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHH HHPEGGKIDIEYINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFE HCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEE WPGDYTDSKHGDLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEEEE IESALMLTEVADETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGH EEHHHHHHHHHHCCCCCCEEECCCEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCC EVWTDEFGRVKIRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNG CCCCCCCCCEEEEEEEHHHHCCCCCCHHEEEEEHHHCCCCCCCEECCCCCCEEEEEEECC DPDRPLILGSLYNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQ CCCCCEEEECHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEHHHCCHHHHHHH AEKDMNRLTKNDESHTVGANFSIGVGLTHTRAVGAMFSSIVGGAASYAVGGAESTMIGGA HHHHHHHHHCCCCCCEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCE YALNVGGAHAVAVGGASSVSVGGAYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKI EEEECCCCEEEEECCCCCEECCCHHHHCCCCEEEEHHHHHHHHHHCCCCEEEEECCEEEE VGKNIRIIGSDEVVVQGAPLQLNPGDSDCGGGGGGGGGGGAIPPIPLPSFFLDITKPILP EECEEEEEECCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC PPPPPPTEVPPDPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPTPTPTPTPTPTSSEI CCCCCCCCCCCCCCCCCC >Mature Secondary Structure PNHFSNGRTNQSRTVVIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFH CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHEEEEEEEEECCCCCE VPLATSANLDLKAMIGTEMTVCIQLDGIGTGAQGGVGAGAREISGLVVKAGFLRCEGRYN EEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEEEEECCCCC VYRIELRPWLWLATLTSDYKIFQDKSVVEIIDTVLHDYPYPVEKRLDIDKYSVAGESARN EEEEEECCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCC EPRAFQVQYGETDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIGGHRKAPSEAYHEIA CCCEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHH HHPEGGKIDIEYINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEGELFE HCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEE WPGDYTDSKHGDLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEEEE IESALMLTEVADETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGH EEHHHHHHHHHHCCCCCCEEECCCEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCC EVWTDEFGRVKIRFLWDRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNG CCCCCCCCCEEEEEEEHHHHCCCCCCHHEEEEEHHHCCCCCCCEECCCCCCEEEEEEECC DPDRPLILGSLYNTITPPPWDLPGDATKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQ CCCCCEEEECHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEHHHCCHHHHHHH AEKDMNRLTKNDESHTVGANFSIGVGLTHTRAVGAMFSSIVGGAASYAVGGAESTMIGGA HHHHHHHHHCCCCCCEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCE YALNVGGAHAVAVGGASSVSVGGAYARNVGGAYALTVGGVLSIVCGASSITMTACGSIKI EEEECCCCEEEEECCCCCEECCCHHHHCCCCEEEEHHHHHHHHHHCCCCEEEEECCEEEE VGKNIRIIGSDEVVVQGAPLQLNPGDSDCGGGGGGGGGGGAIPPIPLPSFFLDITKPILP EECEEEEEECCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC PPPPPPTEVPPDPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPTPTPTPTPTPTSSEI CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8458832 [H]