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The map label for this gene is solR [H]

Identifier: 76817623

GI number: 76817623

Start: 188602

End: 189306

Strand: Direct

Name: solR [H]

Synonym: BURPS1710b_A0142

Alternate gene names: 76817623

Gene position: 188602-189306 (Clockwise)

Preceding gene: 76819768

Following gene: 76819132

Centisome position: 5.93

GC content: 62.7

Gene sequence:

>705_bases
ATGCACGACTTTCTTCAATTTTGGCTAAACGAATTTTCACGCAGTGAGAACCCACAGCACGTCATTTCCGTCTTGACCCG
CGCGGCCGCGACGCTCGGCTACGAATACGCCGCCTACGGCATGCGCCGCCCCTTTCCGATCAGCAATCCGCCGATCCTCA
TGGTGTCCAACTATCCCGCCCGATGGCAGGAACGCTATATCGAAGCGCGATTTGCGAACATCGACGGCGCGGTGAAGGCC
GCGCTCGGCAGCGACCGGCCCGTGACCTGGAGCGCGCCCGCCAACGCATCGAAAAGCGCATTCTGGGCGGAGGCGCTGTC
GTTCGGCATCGCCCACGGCTGGTCGTCCGCGTCGCGGGGCGCGGACGGCGCGATCGGCGTGCTGACGCTGTCGAGAACGC
AGGACCCGATCGACACCGCGGAGAAGTTTCGCAACGAGAGCATCGTGCACTGGCTCGCCAATGTCGCTCATGCGTCGATG
GCGCCGTTCCTGCCCGCCGCCGACGAGTTCGATCCGGACCTCACGCGCCGCGAGACCGATGTGCTGAAATGGACGGCCGA
CGGAAAGACAGCGTACGAAATCGCGCTGATTCTCAGCATCTCGGAGAGCACCGTCAATTTTCACGTGAAGAATATCGTCT
CCAAGCTGGGCTCCACGAACAAGATACAGGCCGTGGCCAAGGCCGCGCTGATGGGGATGCTGTGA

Upstream 100 bases:

>100_bases
CAGAGTGAACCAAAAATAATCCACACCGGACTGCAGACCTTCATCGAGGTCGGCATCTGAATACTGTTTTTTCTCAGTAT
TTCAATGCGAGGATATGGAG

Downstream 100 bases:

>100_bases
CGGCCTCGTCATGACGAGCGCGACCTCGGCCTCGCCTCCGAACGCCCGCCGCGCTTCGCGCGTGCCGGACCCGGCCGGCT
CGCACGCTCATTCGATCGGA

Product: N-acyl-homoserine lactone dependent regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MHDFLQFWLNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMVSNYPARWQERYIEARFANIDGAVKA
ALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWSSASRGADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASM
APFLPAADEFDPDLTRRETDVLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML

Sequences:

>Translated_234_residues
MHDFLQFWLNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMVSNYPARWQERYIEARFANIDGAVKA
ALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWSSASRGADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASM
APFLPAADEFDPDLTRRETDVLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML
>Mature_234_residues
MHDFLQFWLNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMVSNYPARWQERYIEARFANIDGAVKA
ALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWSSASRGADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASM
APFLPAADEFDPDLTRRETDVLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=234, Percent_Identity=30.3418803418803, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 25714; Mature: 25714

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDFLQFWLNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMVSNYPA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCH
RWQERYIEARFANIDGAVKAALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWSSASRG
HHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
ADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASMAPFLPAADEFDPDLTRRETD
CCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
VLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML
EEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHDFLQFWLNEFSRSENPQHVISVLTRAAATLGYEYAAYGMRRPFPISNPPILMVSNYPA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCH
RWQERYIEARFANIDGAVKAALGSDRPVTWSAPANASKSAFWAEALSFGIAHGWSSASRG
HHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
ADGAIGVLTLSRTQDPIDTAEKFRNESIVHWLANVAHASMAPFLPAADEFDPDLTRRETD
CCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
VLKWTADGKTAYEIALILSISESTVNFHVKNIVSKLGSTNKIQAVAKAALMGML
EEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]