| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76817615
Identifier: 76817615
GI number: 76817615
Start: 1763701
End: 1765560
Strand: Direct
Name: 76817615
Synonym: BURPS1710b_A1450
Alternate gene names: NA
Gene position: 1763701-1765560 (Clockwise)
Preceding gene: 76819788
Following gene: 76817645
Centisome position: 55.43
GC content: 71.72
Gene sequence:
>1860_bases ATGAGCACGATCGACGGCCGTCCCCGCACACGGCGCGCGCGCGGCGTTCCACCTAAGCGCCGGCACGAAGACAAGTGCAT CCCGGTCGTGCTCGCGTGGACGCTCGGTGAGCGCGTCGATGTGCGTCCCGATTCGGGCATCGATTTGGACATCGATTTGG AGATCGATTCGGACATCGATTCACATGCCCATACACGCGGAGCAATCGCGATGAGCGCGATCGACGGCCGTCCGCGCATG CCACGCGCGCACCGCGTTCCACCCAAGCGCCGATGCGAAGACAAGTGCATGCCGGCCGTGCTCGCATGGTTGCCCGGCCG GCCCGCACGGCTGCGCGATCGCCGCTGCGCATGCAACGAACCGTACCCGAGCGCGCTCGGCCGTTCGCCGCGCGGTGGCC GGGCATTCGACGGCTGCCGCCGCGACGCCCGCGAATGCGTTCGCCGCCCCGCCCACGGAGAAAGATCGATGACGAACCCG TTCGCCCAATGGTCGAGAGCAAGCGCGTGCGCGCTCGCCATCGTCTGCTTCGCGCCGTCCGGCGCCGCATTCGCCGCGCA GGCGACAGCCGATGTTCCGACCGCCGGCGCGTCGATAGCTTCGGCCGCCTCGACGCCCGCGCCCGGCACGCCGACGAGCG CCGCTGCGGCGGCCCGCTCGTTCGTCACGTCGCCCGCCGCGATCCACGGCGCCGTCGTCGACGCGCGAACCGGCAAGCCG ATCCCGGCCGCGATCGTGACGATCGGCGGCCGGCCGCTGCGCGCGGACGATCGGGGCGCATTCTCGGCCGACGCCGCGGC CGCCGACATCGCCGTGCGCGCGCCCGGCTATCTGGCGACGCGCGCGCGCGCCGAAGCCGGCCGGCCCGTCACCGTCGCGC TCGCGCCGTTCCGGCCCAAAGCCGTCTATCTGTCCGTGTTCGGCATCACGAGCAAGACGCTGCGCGAAGCCGCGGTGGAT CTCAAGGGCGCGACCGCGATCAACGCGCTCGTCGTCGACATGAAGGGCGACCGCGGCATCACGCCGTACCCGAGCGCGGC GCGGCGCGCGTCGGGCGCGGCCGCGCGGACGCCGAACGCCCCCGTCGTGCGCGACTTCGCGGCGCTCGTCGCCGATCTGC ACCGGCGCGGGCTGTATCTGATCGCGCGGATCGTCGTGTTCAAGGACGATCCGCTCGCCGCCGCACACCCGGAGTGGACG GTGCGCGACGCGGACGGCAACATCTGGCGCGACCGCGAAAAGCTGCGCTGGATCGATCCGTCGCTGCGCGAGACGTGGGC GCACAATCTCGACGTCGCCGAGGAGGCGGCGAAGCTCGGCTTCGACGAAATCCAGTTCGACTACGTGCGCTTTCCGGACG CGCGCGAGCTGCGCTTCAGCGTGCCGAACACGCGCGCGAACCGCACCGCGGCGATCGCGGGCTTCCTGCGGGCGGCGCGC GAGCGGCTTGCGCCGTACAACGTGTTCGTCGCCGCCGACATCTTCGGCTACGTCTGCTGGAACGAGGACGACACCGCGAT CGGCCAGCAGATCGAGACGCTCGGCGGGCCGCTCGACTACATCTCGCCGATGCTCTACCCGTCCGGCTTCACGTGGGGCT TGCCGGGCTGCACGCAGCCGACCGCCGATCCCGGGCAGATCGTACGCCGCTCGCTCGTCGAGGCGCGCTCGCGCACCGGC CTGCCCGGCGTGCGGTTCCGGCCGTGGCTGCAGGCGTTTCGCGACTATGCGTTCGATCGCCGCGATTTCGCGGCGGCGGA GATCCGCGCGCAGGTGGACGCCGCCGAGGCCGCCGACACCGACGGATGGATGCTGTGGAACGCGCGCAATCGCTACGATC CGCGGCAGTTGCCGAAGTAG
Upstream 100 bases:
>100_bases GCACGCCGGCCGTGCTGGCGCGGATGCTCGGCGAACGCGGCGACGCGCGTGCCGATTCGCACGCCGATTTACACGTCGAT TCACACGCGGAGCAATCGCG
Downstream 100 bases:
>100_bases CCGCGCGAATGGGGCCGGGCGACGTCATGCGCGGCGCCGGACGAGCGCGGCCTCGTGCCGGCGCGAGGCCGCGTTGCACG CGGCGAAGCGGGTCGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MSTIDGRPRTRRARGVPPKRRHEDKCIPVVLAWTLGERVDVRPDSGIDLDIDLEIDSDIDSHAHTRGAIAMSAIDGRPRM PRAHRVPPKRRCEDKCMPAVLAWLPGRPARLRDRRCACNEPYPSALGRSPRGGRAFDGCRRDARECVRRPAHGERSMTNP FAQWSRASACALAIVCFAPSGAAFAAQATADVPTAGASIASAASTPAPGTPTSAAAAARSFVTSPAAIHGAVVDARTGKP IPAAIVTIGGRPLRADDRGAFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLREAAVD LKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNAPVVRDFAALVADLHRRGLYLIARIVVFKDDPLAAAHPEWT VRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFLRAAR ERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEARSRTG LPGVRFRPWLQAFRDYAFDRRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK
Sequences:
>Translated_619_residues MSTIDGRPRTRRARGVPPKRRHEDKCIPVVLAWTLGERVDVRPDSGIDLDIDLEIDSDIDSHAHTRGAIAMSAIDGRPRM PRAHRVPPKRRCEDKCMPAVLAWLPGRPARLRDRRCACNEPYPSALGRSPRGGRAFDGCRRDARECVRRPAHGERSMTNP FAQWSRASACALAIVCFAPSGAAFAAQATADVPTAGASIASAASTPAPGTPTSAAAAARSFVTSPAAIHGAVVDARTGKP IPAAIVTIGGRPLRADDRGAFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLREAAVD LKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNAPVVRDFAALVADLHRRGLYLIARIVVFKDDPLAAAHPEWT VRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFLRAAR ERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEARSRTG LPGVRFRPWLQAFRDYAFDRRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK >Mature_618_residues STIDGRPRTRRARGVPPKRRHEDKCIPVVLAWTLGERVDVRPDSGIDLDIDLEIDSDIDSHAHTRGAIAMSAIDGRPRMP RAHRVPPKRRCEDKCMPAVLAWLPGRPARLRDRRCACNEPYPSALGRSPRGGRAFDGCRRDARECVRRPAHGERSMTNPF AQWSRASACALAIVCFAPSGAAFAAQATADVPTAGASIASAASTPAPGTPTSAAAAARSFVTSPAAIHGAVVDARTGKPI PAAIVTIGGRPLRADDRGAFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLREAAVDL KGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNAPVVRDFAALVADLHRRGLYLIARIVVFKDDPLAAAHPEWTV RDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFLRAARE RLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEARSRTGL PGVRFRPWLQAFRDYAFDRRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK
Specific function: Unknown
COG id: COG1306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67269; Mature: 67138
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIDGRPRTRRARGVPPKRRHEDKCIPVVLAWTLGERVDVRPDSGIDLDIDLEIDSDID CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCEEEEEEEECCCCC SHAHTRGAIAMSAIDGRPRMPRAHRVPPKRRCEDKCMPAVLAWLPGRPARLRDRRCACNE HHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC PYPSALGRSPRGGRAFDGCRRDARECVRRPAHGERSMTNPFAQWSRASACALAIVCFAPS CCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCC GAAFAAQATADVPTAGASIASAASTPAPGTPTSAAAAARSFVTSPAAIHGAVVDARTGKP CCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHCEEEECCCCCC IPAAIVTIGGRPLRADDRGAFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPK CCEEEEEECCEECCCCCCCCCCCCCHHHCEEEECCCHHHHHHHHCCCCCEEEEECCCCCC AVYLSVFGITSKTLREAAVDLKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNA EEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCC PVVRDFAALVADLHRRGLYLIARIVVFKDDPLAAAHPEWTVRDADGNIWRDREKLRWIDP CHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCEECCHHHHHCCCH SLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFLRAAR HHHHHHHCCCCHHHHHHHCCCHHEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHH ERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQP HHCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC TADPGQIVRRSLVEARSRTGLPGVRFRPWLQAFRDYAFDRRDFAAAEIRAQVDAAEAADT CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC DGWMLWNARNRYDPRQLPK CCEEEECCCCCCCHHCCCC >Mature Secondary Structure STIDGRPRTRRARGVPPKRRHEDKCIPVVLAWTLGERVDVRPDSGIDLDIDLEIDSDID CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCEEEEEEEECCCCC SHAHTRGAIAMSAIDGRPRMPRAHRVPPKRRCEDKCMPAVLAWLPGRPARLRDRRCACNE HHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC PYPSALGRSPRGGRAFDGCRRDARECVRRPAHGERSMTNPFAQWSRASACALAIVCFAPS CCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCC GAAFAAQATADVPTAGASIASAASTPAPGTPTSAAAAARSFVTSPAAIHGAVVDARTGKP CCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHCEEEECCCCCC IPAAIVTIGGRPLRADDRGAFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPK CCEEEEEECCEECCCCCCCCCCCCCHHHCEEEECCCHHHHHHHHCCCCCEEEEECCCCCC AVYLSVFGITSKTLREAAVDLKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNA EEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCC PVVRDFAALVADLHRRGLYLIARIVVFKDDPLAAAHPEWTVRDADGNIWRDREKLRWIDP CHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCEECCHHHHHCCCH SLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFLRAAR HHHHHHHCCCCHHHHHHHCCCHHEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHH ERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQP HHCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC TADPGQIVRRSLVEARSRTGLPGVRFRPWLQAFRDYAFDRRDFAAAEIRAQVDAAEAADT CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC DGWMLWNARNRYDPRQLPK CCEEEECCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA