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The map label for this gene is copC [H]

Identifier: 76817541

GI number: 76817541

Start: 2445086

End: 2445466

Strand: Direct

Name: copC [H]

Synonym: BURPS1710b_A2011

Alternate gene names: 76817541

Gene position: 2445086-2445466 (Clockwise)

Preceding gene: 76818098

Following gene: 76819117

Centisome position: 76.85

GC content: 70.34

Gene sequence:

>381_bases
ATGAAGAGAATCGCCCATCCGAAGCGGGCCGGGCTTGCTGCGCTCGTCGCGGCCTGCGCCGCCATAGCGAGCGCTGCCGC
GTTCGCGCACGGCAAGCTGGAAAGCGCCGTGCCCGCGCCCGGCGGCACGGTCGACACCGCGCCCGACGCGCTGCGCCTCA
CGTTCAACGAAAGCCTCGAATCGGCGTTCAGCACGGTGAAGATCGCCGATGCGGGCGGCGCGCCGGTCGCGGCGCCGAAG
GCGAAGGTCGATGCGGCGAACCCGCGCGTGCTGACGCTCGCCGTGCCGAAGCTCGCGCCGGGTGCGTACACCGTTCAGTG
GACGGTGATGACGGCCGACGCGCACAAGACCAAGGGCTCCTACGCGTTCAAGGTGAAGTGA

Upstream 100 bases:

>100_bases
GCCGACGAGGTGGACGGCGCGCTCACCGTCGTGAAGCTGCAGAAGCCATGACGGCCGGCATCGCCCATCGCATCGCCACG
ATTATTCAGGAATGGAAACC

Downstream 100 bases:

>100_bases
TGAACGACGGTTTCCTCGGCATGGTGCGGCTCGCGGGCGTCGCGCTGCAGAGCGTCTGCTTCGCGATCGCCGTCGGCGTG
CTGCTCGGCGACCAGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKRIAHPKRAGLAALVAACAAIASAAAFAHGKLESAVPAPGGTVDTAPDALRLTFNESLESAFSTVKIADAGGAPVAAPK
AKVDAANPRVLTLAVPKLAPGAYTVQWTVMTADAHKTKGSYAFKVK

Sequences:

>Translated_126_residues
MKRIAHPKRAGLAALVAACAAIASAAAFAHGKLESAVPAPGGTVDTAPDALRLTFNESLESAFSTVKIADAGGAPVAAPK
AKVDAANPRVLTLAVPKLAPGAYTVQWTVMTADAHKTKGSYAFKVK
>Mature_126_residues
MKRIAHPKRAGLAALVAACAAIASAAAFAHGKLESAVPAPGGTVDTAPDALRLTFNESLESAFSTVKIADAGGAPVAAPK
AKVDAANPRVLTLAVPKLAPGAYTVQWTVMTADAHKTKGSYAFKVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=119, Percent_Identity=34.453781512605, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 12736; Mature: 12736

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIAHPKRAGLAALVAACAAIASAAAFAHGKLESAVPAPGGTVDTAPDALRLTFNESLE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHH
SAFSTVKIADAGGAPVAAPKAKVDAANPRVLTLAVPKLAPGAYTVQWTVMTADAHKTKGS
HHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC
YAFKVK
EEEEEC
>Mature Secondary Structure
MKRIAHPKRAGLAALVAACAAIASAAAFAHGKLESAVPAPGGTVDTAPDALRLTFNESLE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHH
SAFSTVKIADAGGAPVAAPKAKVDAANPRVLTLAVPKLAPGAYTVQWTVMTADAHKTKGS
HHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCC
YAFKVK
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]