| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76817309
Identifier: 76817309
GI number: 76817309
Start: 941832
End: 943721
Strand: Direct
Name: 76817309
Synonym: BURPS1710b_A0708
Alternate gene names: NA
Gene position: 941832-943721 (Clockwise)
Preceding gene: 76819363
Following gene: 76818025
Centisome position: 29.6
GC content: 70.16
Gene sequence:
>1890_bases TTGTCAAAATTTTTCGATCAGTCTATCCGGGCAATCGGGCTGACGGCCCCGGATCGCGGACTTTACACTACGTCGCCCGA TGTCACCGTTGGCCGCCATGTCCGCTCGCTCACGCATCGCCGCTGTCTATCTGCTCGGCTTCTCGATCGACCTCGCGAAC ATGTTCGCGATCAACGCCGCGTATCCGGCGCTGCAGCGCGCGCTGCACGCGTCGGTCGCGCAGCTCGCGTGGGTCGGCAA CGTCTACATGCTCGGGCTCACGGTCGTGATTCCGCTCGGCGCTTGGCTTGCGCACCGGTTCGGCGAGCGCAGGCTGCTCA CGGCGTCGCTGCTCGTGTTCGCGCTCGGCAGCGCCGGCGCGGCGAGCGCGCCGTCGATCGGCGCGCTGCTCGCGTCGCGG CTCGTGCAGGGGCTCGGCGGCGGTTTGCTGATTCCCGTCGGCCAGGCGATGACCTATCGCGCCTATCCGCGCGAAGCGCG CGCCCGCCTCACGTCGATCGTGATGATGGTCGCGCTGCTCGTTCCCGCGGCCTCGCCCGCGCTCGGCGGCGTGATCGTCG ACCATGCATCGTGGCGCGTGGTGTTCTGGAGCATGCTCGCGCTCGCCGCGTCGACGTGCACGCTCGCGCTCGCATGGCTG CCCGCCGACGTCGCGCGCGACGCGCCTCGCACGCTCGACGCGGCGGGCCTCGGCCTGAGCGCGGCCGCGCTCGTCGCGTT GCTGCTCGGCCTCGCGTTCGCGAGCCGGCGCGGCGCGGGCGCGCCGGCGATCGCGATGCTCGCGCTCGCATGCACCGCCG GCGTCGCGTATGTCCGGCACGCGCGCCGCTCGAGCGCGCCATTGCTCGATCTCGCGCTGCTCTCGCAGCCGCTCCTGCGT GTCGGCGTCGTTATTTATCTGTGCGTGCCCGGCATTTTCACCGGCGTGAATCTGATCGCGTCGCTCTTTCTGCAAAACGC GCTGGGGCTCGGCGCGACGCAGGTCGGCGCGCTGATGGTGCCGTGGGCCGCCGCGTCGTTCGCCGCGATCGCGACGACGC GGCGCGCGTTCCCCGCGGTCGGCGCGCGGCCGCTGCTCGCATGCGGCGTTGTAGTCGACTGCATCGGCATCGCGCTGCTC GCGACGCCGCTCGCGGCGCACGAGGCAGGCCGCGTGCTCGCCTACGTCGCGATGGGTTTCGGCGCGAGCCTCTGCACGAG CACGTCGCAAACCGCCGCGTTTCTCGATGTGCCCGCCGACCGGATGGGCGAAGCGAGCGCGCTATGGAACATCAATCGCC AATTGAGCTTCTGCCTGGGCGTCGCCGTGCTCGGCGGCATGCTCAATTTCCTGCTGGCAGCCGGCGGCGGCGACGCGCCG CTCGCGTATCGCCGCTGCTTCGCGTTCGGCGCGCTGCTGACCCTGCTGCCGCTGCCGCTCGTCGCACGGCTCGGCTCGCG TCGCGCCGCGGTCTCGCCGGCCGTTTCCGTGGACGCCCAATCGAATCGAACATGAACGAACCGAACCCGTATTTTCAGGA AGTCGTCGACGCGCACGTCGACATCGAACGATGGCTGTCAGGCCGTGCCGAACACGGCCTGCTGCCCGCGTTGCTCGAGC GTTTCTCGCCGCATTTCTCGATGGTCGCCGCGCGCGGCGCGGCGCTCGATCGCGCCGGCCTCGACACGCTGTTTCGCCAG GGGCACGGCCAACGTTCGGGGCTGCGCATCGAGATCGACGAACTGCAACAGATCGGCGCCTGGCGCGACGGCGCGGTGAT CGGTTACCGGGAGACGCAGACCGACGGCGAAGGCCGCTCGAACACGAGACGCTCGACGGTCGTGTTCGAACGCGACGCGG CCTCGCGCATCGTCTGGCGGCATCTGCACGAAACGTTGCTCGGCGCATGA
Upstream 100 bases:
>100_bases CGCGCCTGGTTCAGCACGTTCGCCGCGCCCGTAAACGAGCCGGCCTCCACGACCGCGCGAAACACGTCGAAACGATCCAA ACTCACCATCGCGCCCTCGA
Downstream 100 bases:
>100_bases AGTTCGCGCGAGCGAAGGCGGCCCGGCTCGACCGCGCCGGCCGAGGCGGCGCAACCCGTTCGCCGCCCTTCGCGCGGTCG AGCCATCCGGCGCGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MSKFFDQSIRAIGLTAPDRGLYTTSPDVTVGRHVRSLTHRRCLSARLLDRPREHVRDQRRVSGAAARAARVGRAARVGRQ RLHARAHGRDSARRLACAPVRRAQAAHGVAARVRARQRRRGERAVDRRAARVAARAGARRRFADSRRPGDDLSRLSARSA RPPHVDRDDGRAARSRGLARARRRDRRPCIVARGVLEHARARRVDVHARARMAARRRRARRASHARRGGPRPERGRARRV AARPRVREPARRGRAGDRDARARMHRRRRVCPARAPLERAIARSRAALAAAPACRRRYLSVRARHFHRRESDRVALSAKR AGARRDAGRRADGAVGRRVVRRDRDDAARVPRGRRAAAARMRRCSRLHRHRAARDAARGARGRPRARLRRDGFRREPLHE HVANRRVSRCARRPDGRSERAMEHQSPIELLPGRRRARRHAQFPAGSRRRRRAARVSPLLRVRRAADPAAAAARRTARLA SRRGLAGRFRGRPIESNMNEPNPYFQEVVDAHVDIERWLSGRAEHGLLPALLERFSPHFSMVAARGAALDRAGLDTLFRQ GHGQRSGLRIEIDELQQIGAWRDGAVIGYRETQTDGEGRSNTRRSTVVFERDAASRIVWRHLHETLLGA
Sequences:
>Translated_629_residues MSKFFDQSIRAIGLTAPDRGLYTTSPDVTVGRHVRSLTHRRCLSARLLDRPREHVRDQRRVSGAAARAARVGRAARVGRQ RLHARAHGRDSARRLACAPVRRAQAAHGVAARVRARQRRRGERAVDRRAARVAARAGARRRFADSRRPGDDLSRLSARSA RPPHVDRDDGRAARSRGLARARRRDRRPCIVARGVLEHARARRVDVHARARMAARRRRARRASHARRGGPRPERGRARRV AARPRVREPARRGRAGDRDARARMHRRRRVCPARAPLERAIARSRAALAAAPACRRRYLSVRARHFHRRESDRVALSAKR AGARRDAGRRADGAVGRRVVRRDRDDAARVPRGRRAAAARMRRCSRLHRHRAARDAARGARGRPRARLRRDGFRREPLHE HVANRRVSRCARRPDGRSERAMEHQSPIELLPGRRRARRHAQFPAGSRRRRRAARVSPLLRVRRAADPAAAAARRTARLA SRRGLAGRFRGRPIESNMNEPNPYFQEVVDAHVDIERWLSGRAEHGLLPALLERFSPHFSMVAARGAALDRAGLDTLFRQ GHGQRSGLRIEIDELQQIGAWRDGAVIGYRETQTDGEGRSNTRRSTVVFERDAASRIVWRHLHETLLGA >Mature_628_residues SKFFDQSIRAIGLTAPDRGLYTTSPDVTVGRHVRSLTHRRCLSARLLDRPREHVRDQRRVSGAAARAARVGRAARVGRQR LHARAHGRDSARRLACAPVRRAQAAHGVAARVRARQRRRGERAVDRRAARVAARAGARRRFADSRRPGDDLSRLSARSAR PPHVDRDDGRAARSRGLARARRRDRRPCIVARGVLEHARARRVDVHARARMAARRRRARRASHARRGGPRPERGRARRVA ARPRVREPARRGRAGDRDARARMHRRRRVCPARAPLERAIARSRAALAAAPACRRRYLSVRARHFHRRESDRVALSAKRA GARRDAGRRADGAVGRRVVRRDRDDAARVPRGRRAAAARMRRCSRLHRHRAARDAARGARGRPRARLRRDGFRREPLHEH VANRRVSRCARRPDGRSERAMEHQSPIELLPGRRRARRHAQFPAGSRRRRRAARVSPLLRVRRAADPAAAAARRTARLAS RRGLAGRFRGRPIESNMNEPNPYFQEVVDAHVDIERWLSGRAEHGLLPALLERFSPHFSMVAARGAALDRAGLDTLFRQG HGQRSGLRIEIDELQQIGAWRDGAVIGYRETQTDGEGRSNTRRSTVVFERDAASRIVWRHLHETLLGA
Specific function: Unknown
COG id: COG4460
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71447; Mature: 71316
Theoretical pI: Translated: 12.65; Mature: 12.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFFDQSIRAIGLTAPDRGLYTTSPDVTVGRHVRSLTHRRCLSARLLDRPREHVRDQRR CCHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH VSGAAARAARVGRAARVGRQRLHARAHGRDSARRLACAPVRRAQAAHGVAARVRARQRRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GERAVDRRAARVAARAGARRRFADSRRPGDDLSRLSARSARPPHVDRDDGRAARSRGLAR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ARRRDRRPCIVARGVLEHARARRVDVHARARMAARRRRARRASHARRGGPRPERGRARRV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AARPRVREPARRGRAGDRDARARMHRRRRVCPARAPLERAIARSRAALAAAPACRRRYLS HHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRARHFHRRESDRVALSAKRAGARRDAGRRADGAVGRRVVRRDRDDAARVPRGRRAAAAR HHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHH MRRCSRLHRHRAARDAARGARGRPRARLRRDGFRREPLHEHVANRRVSRCARRPDGRSER HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH AMEHQSPIELLPGRRRARRHAQFPAGSRRRRRAARVSPLLRVRRAADPAAAAARRTARLA HHHHCCCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SRRGLAGRFRGRPIESNMNEPNPYFQEVVDAHVDIERWLSGRAEHGLLPALLERFSPHFS HHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH MVAARGAALDRAGLDTLFRQGHGQRSGLRIEIDELQQIGAWRDGAVIGYRETQTDGEGRS HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCCEEEEECCCCCCCCCC NTRRSTVVFERDAASRIVWRHLHETLLGA CCCCCEEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKFFDQSIRAIGLTAPDRGLYTTSPDVTVGRHVRSLTHRRCLSARLLDRPREHVRDQRR CHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH VSGAAARAARVGRAARVGRQRLHARAHGRDSARRLACAPVRRAQAAHGVAARVRARQRRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GERAVDRRAARVAARAGARRRFADSRRPGDDLSRLSARSARPPHVDRDDGRAARSRGLAR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ARRRDRRPCIVARGVLEHARARRVDVHARARMAARRRRARRASHARRGGPRPERGRARRV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AARPRVREPARRGRAGDRDARARMHRRRRVCPARAPLERAIARSRAALAAAPACRRRYLS HHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRARHFHRRESDRVALSAKRAGARRDAGRRADGAVGRRVVRRDRDDAARVPRGRRAAAAR HHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHH MRRCSRLHRHRAARDAARGARGRPRARLRRDGFRREPLHEHVANRRVSRCARRPDGRSER HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH AMEHQSPIELLPGRRRARRHAQFPAGSRRRRRAARVSPLLRVRRAADPAAAAARRTARLA HHHHCCCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SRRGLAGRFRGRPIESNMNEPNPYFQEVVDAHVDIERWLSGRAEHGLLPALLERFSPHFS HHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH MVAARGAALDRAGLDTLFRQGHGQRSGLRIEIDELQQIGAWRDGAVIGYRETQTDGEGRS HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCCEEEEECCCCCCCCCC NTRRSTVVFERDAASRIVWRHLHETLLGA CCCCCEEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA