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The map label for this gene is rbn [C]

Identifier: 76817269

GI number: 76817269

Start: 987131

End: 988144

Strand: Direct

Name: rbn [C]

Synonym: BURPS1710b_A0744

Alternate gene names: 76817269

Gene position: 987131-988144 (Clockwise)

Preceding gene: 76819848

Following gene: 76818322

Centisome position: 31.02

GC content: 69.03

Gene sequence:

>1014_bases
GTGGAATTGAATAAACTTTTCTCATCGGCCGGCGTCCGACGCAAAACGGCTAACGACCCCGGCGCGCGATGCCCGCCCTA
TGCGCAACCCATGAAATCCTTGATCCCGCAACAACCGCAAAAGCTCGTGCGTCACAACGTCAACTGGGCGCTCGACGCGT
TCAAGCGCTTCTCCGCCGACCGCTGCACGGCGATGGCGGCGAGCATCGCGTTCTATTCGGCGTTCTCGCTCGCGCCGACG
CTCGTGATGGTGATCGCGGTCGCCGGCTGGTTCTTCGGCGCCGACGCCGCACGCGGCGAGGTGTTCAGCCACGTGCACGA
GCTGATCGGCAACGAGGCGGCGGCCGGCGTGCAGACGATCGTCGAGAACGCGCATCGCAGCGGCAGCCGCGGCGGCACCG
CGGCCCTGATCTCGTTCGCGATGCTCGCGCTCGGCGCATCCGCGACGTTCGCATCGCTGAACACCGCGCTCAGCGTGATC
TGGCCCGCGACCGGGGCGCGCGCGTCGTCGGTGCTCGGTCTCGTGCGGATACGGCTGATCTCGTTCGGGCTCGTGCTCGG
CGTCGCGTTCCTGCTGATCGTGTCGCTCGTGCTCGACACCGCGATCACCTTCATCGGCCGCTGGCTGTGGGGCGCGTCGC
CGTATGTCGTGATCGGCAACCTGCTGCAGTTCTCGATCGGCATCGCGGTGCTCGCATTCGCGTTCGGCACGCTGATGAAA
TTCCTGCCGGACGCGCGTGTCTCGAACCGCGATGCGATGACAGGCGGCATCGTCTCCGCCGTGCTGTTCTCGGCGGGCAA
GAAGCTGTTCGCGCTGTATCTCGCGCACGCCGGCACCGCGAGCGCGTTCGGCGCCGCGGGATCGTTCGCCGTGCTGCTGA
TGTGGCTGTACTTCTCGGCCGCGGTGCTGCTGCTCGGCGCGGAATTCGCGGCGGCGCGCGGCGCGGCGCGCGCGTCGGGC
GAAGCCGCGCAGCCCGGCGAGGCCGCGCCCGCGCGCGGCGGCCCGCGCAACTGA

Upstream 100 bases:

>100_bases
ACGCGGCAAGCCCCGTGCCGCGCCTCTGCGCGGCGCCGCCACACGCGGCCGGCGCCTCAGCCCCTGCCGGTCCCGGCGCG
TCGGCTCGTCGCCCTGCTCC

Downstream 100 bases:

>100_bases
CGCGCGCGATCGACGCACCGGCAAGTGCGCCGCGCCTTACGCCGGCCTTTCCGGGTATTGCGCGCGAGCAAACGTCCGGT
TCGGCCTGTCGCGCCTCGAG

Product: putative ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MELNKLFSSAGVRRKTANDPGARCPPYAQPMKSLIPQQPQKLVRHNVNWALDAFKRFSADRCTAMAASIAFYSAFSLAPT
LVMVIAVAGWFFGADAARGEVFSHVHELIGNEAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVI
WPATGARASSVLGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVLAFAFGTLMK
FLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASAFGAAGSFAVLLMWLYFSAAVLLLGAEFAAARGAARASG
EAAQPGEAAPARGGPRN

Sequences:

>Translated_337_residues
MELNKLFSSAGVRRKTANDPGARCPPYAQPMKSLIPQQPQKLVRHNVNWALDAFKRFSADRCTAMAASIAFYSAFSLAPT
LVMVIAVAGWFFGADAARGEVFSHVHELIGNEAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVI
WPATGARASSVLGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVLAFAFGTLMK
FLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASAFGAAGSFAVLLMWLYFSAAVLLLGAEFAAARGAARASG
EAAQPGEAAPARGGPRN
>Mature_337_residues
MELNKLFSSAGVRRKTANDPGARCPPYAQPMKSLIPQQPQKLVRHNVNWALDAFKRFSADRCTAMAASIAFYSAFSLAPT
LVMVIAVAGWFFGADAARGEVFSHVHELIGNEAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVI
WPATGARASSVLGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVLAFAFGTLMK
FLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASAFGAAGSFAVLLMWLYFSAAVLLLGAEFAAARGAARASG
EAAQPGEAAPARGGPRN

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=297, Percent_Identity=26.9360269360269, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 35110; Mature: 35110

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA