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The map label for this gene is ubiC1

Identifier: 76817243

GI number: 76817243

Start: 1525981

End: 1526535

Strand: Direct

Name: ubiC1

Synonym: BURPS1710b_A1215

Alternate gene names: 76817243

Gene position: 1525981-1526535 (Clockwise)

Preceding gene: 76818895

Following gene: 76817976

Centisome position: 47.96

GC content: 69.91

Gene sequence:

>555_bases
ATGAACACTTCGAGCGGCTGGTCGCGCCAGCCGCCCGCATCGCTTTCCGAGCTCGAGATCCACTGGCTCTTCGCGCCGGG
CTCGCTGACGGAAAGACTGAGCGCATTGGGCGAATACTCGCTCGAACCCGTCGATCAACGCCACGCGGCCGCCTGCGCCG
CCGACGCGTCGCTGCTCGGCGTCGAGCCCGATTCGCCGATCTGGGTTCGCGAAGTCGTGATGCGCCTTGATGCGCAGCCG
TGCGTGACCGCGCGCAGCATCGCGTCGGCGCACGCGCTCGAAACGCAGTGGAAGCCGCTGACGGGCTACGGCAGCCTTCC
GCTCGGGCACATCCTGTACGACGATCCCGCGATCGTCCGTGCGCCGTTCGAGTGCGCGCTGCTGATGCCGGACGATCCGC
TCGACGCGATCTCGCGCCGCTATGCGCGCGCCGCCGCGCCGCCGCGCGCGCGACGCTCCGCATTCGTGCGCAACGGCGCG
ACGCTCGTCGTCAGCGAATGCTTCCTGCCGCAATTCTGGAGTGGCTTCGCGCAGGCCCGGCTCGCCGGCGCTTGA

Upstream 100 bases:

>100_bases
CGCGCCGACGCAGGCGGGCGGCGCGTGAGGCGCCCTCCCGCCGCCGGACGCGGCGTGGCCCCGAATCGATCTGCGTTTCG
CGCTACGAGGCCAACACATC

Downstream 100 bases:

>100_bases
CGCGCCGCGGCGCGCCGAACCCGCCGCCGCCTGTTCGTGCAGTAGACGTTGAAGCTGGTCGAGCCCGGCAAGCCGGACGT
GAGCTATGGCCTGCACAAGC

Product: chorismate lyase superfamily protein

Products: NA

Alternate protein names: CL 1; CPL 1

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNTSSGWSRQPPASLSELEIHWLFAPGSLTERLSALGEYSLEPVDQRHAAACAADASLLGVEPDSPIWVREVVMRLDAQP
CVTARSIASAHALETQWKPLTGYGSLPLGHILYDDPAIVRAPFECALLMPDDPLDAISRRYARAAAPPRARRSAFVRNGA
TLVVSECFLPQFWSGFAQARLAGA

Sequences:

>Translated_184_residues
MNTSSGWSRQPPASLSELEIHWLFAPGSLTERLSALGEYSLEPVDQRHAAACAADASLLGVEPDSPIWVREVVMRLDAQP
CVTARSIASAHALETQWKPLTGYGSLPLGHILYDDPAIVRAPFECALLMPDDPLDAISRRYARAAAPPRARRSAFVRNGA
TLVVSECFLPQFWSGFAQARLAGA
>Mature_184_residues
MNTSSGWSRQPPASLSELEIHWLFAPGSLTERLSALGEYSLEPVDQRHAAACAADASLLGVEPDSPIWVREVVMRLDAQP
CVTARSIASAHALETQWKPLTGYGSLPLGHILYDDPAIVRAPFECALLMPDDPLDAISRRYARAAAPPRARRSAFVRNGA
TLVVSECFLPQFWSGFAQARLAGA

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UBIC1_BURP1 (Q3JJ81)

Other databases:

- EMBL:   CP000125
- RefSeq:   YP_336372.1
- ProteinModelPortal:   Q3JJ81
- SMR:   Q3JJ81
- STRING:   Q3JJ81
- GeneID:   3693109
- GenomeReviews:   CP000125_GR
- KEGG:   bpm:BURPS1710b_A1215
- TIGR:   BURPS1710b_A1215
- eggNOG:   COG3161
- HOGENOM:   HBG644467
- OMA:   MNTSSGW
- ProtClustDB:   CLSK752967
- BioCyc:   BPSE320372:BURPS1710B_B1436-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01632
- InterPro:   IPR007440

Pfam domain/function: PF04345 Chor_lyase

EC number: =4.1.3.40

Molecular weight: Translated: 19954; Mature: 19954

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00435 PEROXIDASE_1

Important sites: BINDING 70-70 BINDING 108-108

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSGWSRQPPASLSELEIHWLFAPGSLTERLSALGEYSLEPVDQRHAAACAADASLLG
CCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEC
VEPDSPIWVREVVMRLDAQPCVTARSIASAHALETQWKPLTGYGSLPLGHILYDDPAIVR
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEE
APFECALLMPDDPLDAISRRYARAAAPPRARRSAFVRNGATLVVSECFLPQFWSGFAQAR
CCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
LAGA
HCCC
>Mature Secondary Structure
MNTSSGWSRQPPASLSELEIHWLFAPGSLTERLSALGEYSLEPVDQRHAAACAADASLLG
CCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEC
VEPDSPIWVREVVMRLDAQPCVTARSIASAHALETQWKPLTGYGSLPLGHILYDDPAIVR
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEE
APFECALLMPDDPLDAISRRYARAAAPPRARRSAFVRNGATLVVSECFLPQFWSGFAQAR
CCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
LAGA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA