| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75910077
Identifier: 75910077
GI number: 75910077
Start: 4826810
End: 4827607
Strand: Direct
Name: 75910077
Synonym: Ava_3873
Alternate gene names: NA
Gene position: 4826810-4827607 (Clockwise)
Preceding gene: 75910074
Following gene: 75910078
Centisome position: 75.82
GC content: 42.48
Gene sequence:
>798_bases ATGAAAGCAGGCATAAAACGCATTGAAGCAACTTTACATGATTTAGGGACAAAGGACACTACTGCAACAGAAGTAAGTGA TTCTACAAAACGTCCACTATCTTTTAGGATTAGTGTTGCAGGTAAAGACACAGCCGAAAGTGAAGGTAACAGCCCAGAAA AAACACAAAATCTGGACATAGATACTCACGTTGAGTATTCTTCGCCTGAACAAAATTTATTTCCCCACCATAGTTCTGTG CAGACTTTTCCGGCACAGGAGGGGCTAGGCAAAACACCAAGCTTGCCAAAATTTAAGACACCTACCTTCAGTAGTCATCG CCACGGTGCAAACCCAGCGTTGGCGATGAATATGTTGCAAGAAATTCAAGAAATAGTTGCTGGTTGGCAGCAAGAATTAC AAAATATACTACAACAAATTCAAGATATTTACTTAGAAGGGCCAATTGTTAATGGTTGGTTAGAATCCAATCCTAGCGAA CCTGAAGCTGCTGGTACTGCTACGTTACGCCATGCAGAAGTCGATCGCCTGATGAATTACGTAGAAGAAATTTGTGCTAA TGATGGGAAAGTACCTCATCAAGCACCTCGTACTGGTTATCATCTTTGTGGGTTGGATAATTCTGGTAGAGTTTGGTCGC GCCCATGTCCAGCAGATCAGTTGGCTAGCGTGAGTATGGCGATCGCTCGTTACCAAAAATTACGCCAATTTTTGGGACGT AAGCAATATCTGGAAACTCGTCTCAGTCAACTAGCGGAAACCCTCGTAGTTTTACATAGTCACATTCAACAGACATGA
Upstream 100 bases:
>100_bases CATTATTTATGCCAAAATTGGCACAAGCTAAAAAATCTTAACACCCCCATTTTCAAATATTAAATAGCTTTGGGGAACGT AGATTTGAGGAATTAGGTAT
Downstream 100 bases:
>100_bases AATTCTCACATTATTTCCGCAAAAACGCGGTTGGTAAGGAGGAAAGCTAAGTATAGATTAAGTTTCAGTAGTTAAAGGCA AAACTGACTGACTTCGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKAGIKRIEATLHDLGTKDTTATEVSDSTKRPLSFRISVAGKDTAESEGNSPEKTQNLDIDTHVEYSSPEQNLFPHHSSV QTFPAQEGLGKTPSLPKFKTPTFSSHRHGANPALAMNMLQEIQEIVAGWQQELQNILQQIQDIYLEGPIVNGWLESNPSE PEAAGTATLRHAEVDRLMNYVEEICANDGKVPHQAPRTGYHLCGLDNSGRVWSRPCPADQLASVSMAIARYQKLRQFLGR KQYLETRLSQLAETLVVLHSHIQQT
Sequences:
>Translated_265_residues MKAGIKRIEATLHDLGTKDTTATEVSDSTKRPLSFRISVAGKDTAESEGNSPEKTQNLDIDTHVEYSSPEQNLFPHHSSV QTFPAQEGLGKTPSLPKFKTPTFSSHRHGANPALAMNMLQEIQEIVAGWQQELQNILQQIQDIYLEGPIVNGWLESNPSE PEAAGTATLRHAEVDRLMNYVEEICANDGKVPHQAPRTGYHLCGLDNSGRVWSRPCPADQLASVSMAIARYQKLRQFLGR KQYLETRLSQLAETLVVLHSHIQQT >Mature_265_residues MKAGIKRIEATLHDLGTKDTTATEVSDSTKRPLSFRISVAGKDTAESEGNSPEKTQNLDIDTHVEYSSPEQNLFPHHSSV QTFPAQEGLGKTPSLPKFKTPTFSSHRHGANPALAMNMLQEIQEIVAGWQQELQNILQQIQDIYLEGPIVNGWLESNPSE PEAAGTATLRHAEVDRLMNYVEEICANDGKVPHQAPRTGYHLCGLDNSGRVWSRPCPADQLASVSMAIARYQKLRQFLGR KQYLETRLSQLAETLVVLHSHIQQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29445; Mature: 29445
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAGIKRIEATLHDLGTKDTTATEVSDSTKRPLSFRISVAGKDTAESEGNSPEKTQNLDI CCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCC DTHVEYSSPEQNLFPHHSSVQTFPAQEGLGKTPSLPKFKTPTFSSHRHGANPALAMNMLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH EIQEIVAGWQQELQNILQQIQDIYLEGPIVNGWLESNPSEPEAAGTATLRHAEVDRLMNY HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHH VEEICANDGKVPHQAPRTGYHLCGLDNSGRVWSRPCPADQLASVSMAIARYQKLRQFLGR HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KQYLETRLSQLAETLVVLHSHIQQT HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAGIKRIEATLHDLGTKDTTATEVSDSTKRPLSFRISVAGKDTAESEGNSPEKTQNLDI CCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCC DTHVEYSSPEQNLFPHHSSVQTFPAQEGLGKTPSLPKFKTPTFSSHRHGANPALAMNMLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH EIQEIVAGWQQELQNILQQIQDIYLEGPIVNGWLESNPSEPEAAGTATLRHAEVDRLMNY HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHH VEEICANDGKVPHQAPRTGYHLCGLDNSGRVWSRPCPADQLASVSMAIARYQKLRQFLGR HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KQYLETRLSQLAETLVVLHSHIQQT HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA