| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75910041
Identifier: 75910041
GI number: 75910041
Start: 4773410
End: 4774777
Strand: Direct
Name: 75910041
Synonym: Ava_3837
Alternate gene names: NA
Gene position: 4773410-4774777 (Clockwise)
Preceding gene: 75910040
Following gene: 75910045
Centisome position: 74.99
GC content: 37.43
Gene sequence:
>1368_bases ATGCCAGATGCAACTCCCAAAAATCCAGTTGTTATGCTCCACGGTTACTCTGATACGGGGAAATCTTTTCAAGCGTGGAT AAAAAAGTTTGAAGAAAACAATTATGATGTCAAAATTATTCATATTTGTAAATATGTATCCCTATCTAATGAGATTAACA TTGAGGATATTGCTGAAGGATTAGATCAAGCTTTAGCGGAGAAATTAGGTAATAACAGAACCTTCGATGCGATCGTTCAC TCAACTGGAATGTTGGTGATTCGTGCTTGGTTGGCGAAATACTCTAGCCAAGGTTATTATCGACTCCAGCACTTGATTGG ATTAGCACCAGCCACTTTTGGTTCTCCTATCGCCCACAAAGGCCGCAGTTTTTTAGGTGCGCTGTTTAAAGGAAACAGAG AGTGGGGGCCAGACTTTCTAGAAGCAGGAACTCGCATATTAGATGCGTTGGAATTAGGAAGTAAGTTTAGTTGGGATTTG GCACATAAAGATTTACTAGGCGAAACCACATTTTACGGTTCAGGTAGTGATACACCTTTTGTATTTACCTTCTGTGGAAC ACAACAGTTTTTTCAATCACCATTACTAAATAACTTTGTCGGAAGAATCACAAATAGAGTTGGTGTACCGCTTGATGGTA CAGATGGTGTTGTCAGGTGGGCTGGATGTGAACTGAGAACACGTAAAATAACTATAGATTTTACTAAACAGCAACCTGAA GATAAATTATCTATTTCACCCTGGAAAAATAGTGGTATTGCTCATGCAGTCAGAGTTAAGGATCATAACCACGGCAAAAT TATGGGTGATCCTAGTTTAGACTTGGTAGAGTCGGTATTTCAGGCATTAAAATTTACATCTGAACAAGATATTAATCTTT GGCATCAGACAGCCTTAAAGAGGCTATCACCAAATGATTCTGAGAATGCAGAATGGCAACAGTTTATTATTCGGGCGATA GATGATAATGATGAGCCAATTCCTGATTACTATATTGAATTGGCAACATCACAAAACAATCAGTGGAAACGAATTGAAGA TTTTGGTGTAGATGTTCACGTCTATGCACAAGATAAAAGTCTACGCTGTTTTCATGTAGATATCACTAAGACTAAAAATT TGCAAAATTTGCAAATACGCATTGTTGCGTCATCAAATTCCGAGTATGTGCGTTATGTTGGGTATGCTTCTAGTGCAGAA AATTCTGATTCTATTACCGATTTAGAGCTAGATATTTCTCATATTTTGCAGCAGAAAGATATCAAATTTTTCTATCCATT CACCACAACTCTAGTGGAAATAAGACTTAAGCGGCAAACAAGAAAACAATTATTGCAGTTTATGGCTTTCGCTGAATCAA AATTTTGA
Upstream 100 bases:
>100_bases TGGTGCTGGATGTGTCATTTATTTTTGAGCTAGTTTAATGCCATCCTTGTGGGTGGATATTCTTCACAATTAATGACATC TCCTACCTGTAAATAAGCTT
Downstream 100 bases:
>100_bases TTTTCTGGGGATTGGGTACTGGGTACTGGGGATTGGGGATTGGGGATTAGGCAAGAAAATTTTGGAGTAAGTTCTCCCCC TGCTTCCCCTGCTCCTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: PlaB Phospholipase
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MPDATPKNPVVMLHGYSDTGKSFQAWIKKFEENNYDVKIIHICKYVSLSNEINIEDIAEGLDQALAEKLGNNRTFDAIVH STGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHKGRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDL AHKDLLGETTFYGSGSDTPFVFTFCGTQQFFQSPLLNNFVGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE DKLSISPWKNSGIAHAVRVKDHNHGKIMGDPSLDLVESVFQALKFTSEQDINLWHQTALKRLSPNDSENAEWQQFIIRAI DDNDEPIPDYYIELATSQNNQWKRIEDFGVDVHVYAQDKSLRCFHVDITKTKNLQNLQIRIVASSNSEYVRYVGYASSAE NSDSITDLELDISHILQQKDIKFFYPFTTTLVEIRLKRQTRKQLLQFMAFAESKF
Sequences:
>Translated_455_residues MPDATPKNPVVMLHGYSDTGKSFQAWIKKFEENNYDVKIIHICKYVSLSNEINIEDIAEGLDQALAEKLGNNRTFDAIVH STGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHKGRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDL AHKDLLGETTFYGSGSDTPFVFTFCGTQQFFQSPLLNNFVGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE DKLSISPWKNSGIAHAVRVKDHNHGKIMGDPSLDLVESVFQALKFTSEQDINLWHQTALKRLSPNDSENAEWQQFIIRAI DDNDEPIPDYYIELATSQNNQWKRIEDFGVDVHVYAQDKSLRCFHVDITKTKNLQNLQIRIVASSNSEYVRYVGYASSAE NSDSITDLELDISHILQQKDIKFFYPFTTTLVEIRLKRQTRKQLLQFMAFAESKF >Mature_454_residues PDATPKNPVVMLHGYSDTGKSFQAWIKKFEENNYDVKIIHICKYVSLSNEINIEDIAEGLDQALAEKLGNNRTFDAIVHS TGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHKGRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDLA HKDLLGETTFYGSGSDTPFVFTFCGTQQFFQSPLLNNFVGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPED KLSISPWKNSGIAHAVRVKDHNHGKIMGDPSLDLVESVFQALKFTSEQDINLWHQTALKRLSPNDSENAEWQQFIIRAID DNDEPIPDYYIELATSQNNQWKRIEDFGVDVHVYAQDKSLRCFHVDITKTKNLQNLQIRIVASSNSEYVRYVGYASSAEN SDSITDLELDISHILQQKDIKFFYPFTTTLVEIRLKRQTRKQLLQFMAFAESKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51750; Mature: 51619
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDATPKNPVVMLHGYSDTGKSFQAWIKKFEENNYDVKIIHICKYVSLSNEINIEDIAEG CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHH LDQALAEKLGNNRTFDAIVHSTGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHK HHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH GRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDLAHKDLLGETTFYGSGSDTPF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEECCCCCCCE VFTFCGTQQFFQSPLLNNFVGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE EEEECCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCC DKLSISPWKNSGIAHAVRVKDHNHGKIMGDPSLDLVESVFQALKFTSEQDINLWHQTALK CCEEECCCCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH RLSPNDSENAEWQQFIIRAIDDNDEPIPDYYIELATSQNNQWKRIEDFGVDVHVYAQDKS HCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEECCCC LRCFHVDITKTKNLQNLQIRIVASSNSEYVRYVGYASSAENSDSITDLELDISHILQQKD EEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHCC IKFFYPFTTTLVEIRLKRQTRKQLLQFMAFAESKF CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDATPKNPVVMLHGYSDTGKSFQAWIKKFEENNYDVKIIHICKYVSLSNEINIEDIAEG CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHH LDQALAEKLGNNRTFDAIVHSTGMLVIRAWLAKYSSQGYYRLQHLIGLAPATFGSPIAHK HHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH GRSFLGALFKGNREWGPDFLEAGTRILDALELGSKFSWDLAHKDLLGETTFYGSGSDTPF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEECCCCCCCE VFTFCGTQQFFQSPLLNNFVGRITNRVGVPLDGTDGVVRWAGCELRTRKITIDFTKQQPE EEEECCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCC DKLSISPWKNSGIAHAVRVKDHNHGKIMGDPSLDLVESVFQALKFTSEQDINLWHQTALK CCEEECCCCCCCCEEEEEEEECCCCCEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH RLSPNDSENAEWQQFIIRAIDDNDEPIPDYYIELATSQNNQWKRIEDFGVDVHVYAQDKS HCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEECCCC LRCFHVDITKTKNLQNLQIRIVASSNSEYVRYVGYASSAENSDSITDLELDISHILQQKD EEEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHCC IKFFYPFTTTLVEIRLKRQTRKQLLQFMAFAESKF CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA